; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh01G018260 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G018260
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRNA-binding protein 1-like
Genome locationCmo_Chr01:13369447..13370570
RNA-Seq ExpressionCmoCh01G018260
SyntenyCmoCh01G018260
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608405.1 RNA-binding protein 1, partial [Cucurbita argyrosperma subsp. sororia]1.9e-11198.99Show/hide
Query:  KNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKSPLSESNVLPSYPYYSCGYTVYPGFTP
        K+YFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKSPLSESNVLPSYPYYSCGYTVYPGFTP
Subjt:  KNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKSPLSESNVLPSYPYYSCGYTVYPGFTP

Query:  FPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPPHKNSLVYPTYSSNGLSTPVAGYETADARRKVDPPTRAQKNMSADAVPFHAKDKA
        FPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPPHK+SLVYPTYSSNGLSTPVAGYETADARRKVDPPTRAQKNMSADAVPFHAKDKA
Subjt:  FPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPPHKNSLVYPTYSSNGLSTPVAGYETADARRKVDPPTRAQKNMSADAVPFHAKDKA

KAG7037746.1 RNA-binding protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]7.2e-13597.53Show/hide
Query:  VYGKETVELAREQRMINGTGMEDQFRGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEV
        + GKETVELAREQRM NGT MEDQFRGRKIFVGGLSAELTEDDFK+YFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEV
Subjt:  VYGKETVELAREQRMINGTGMEDQFRGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEV

Query:  KRAIPKKGNYNGGHISKSPLSESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPPHKNSLVYPTYS
        KRAIPKKGNYNGGHISKSPLSESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPPHK+SLVYPTYS
Subjt:  KRAIPKKGNYNGGHISKSPLSESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPPHKNSLVYPTYS

Query:  SNGLSTPVAGYETADARRKVDPPTRAQKNMSADAVPFHAKDKA
        SNGLSTPVAGYETADARRKVDPPTRAQKNMSADAVPFHAKDKA
Subjt:  SNGLSTPVAGYETADARRKVDPPTRAQKNMSADAVPFHAKDKA

XP_022940975.1 RNA-binding protein 1-like [Cucurbita moschata]1.1e-130100Show/hide
Query:  MINGTGMEDQFRGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGH
        MINGTGMEDQFRGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGH
Subjt:  MINGTGMEDQFRGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGH

Query:  ISKSPLSESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPPHKNSLVYPTYSSNGLSTPVAGYETA
        ISKSPLSESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPPHKNSLVYPTYSSNGLSTPVAGYETA
Subjt:  ISKSPLSESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPPHKNSLVYPTYSSNGLSTPVAGYETA

Query:  DARRKVDPPTRAQKNMSADAVPFHAKDKA
        DARRKVDPPTRAQKNMSADAVPFHAKDKA
Subjt:  DARRKVDPPTRAQKNMSADAVPFHAKDKA

XP_022982410.1 RNA-binding protein 1-like [Cucurbita maxima]8.5e-12897.82Show/hide
Query:  MINGTGMEDQFRGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGH
        M NGT MEDQFRGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGH
Subjt:  MINGTGMEDQFRGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGH

Query:  ISKSPLSESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPPHKNSLVYPTYSSNGLSTPVAGYETA
        ISKSPLSESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWY PNFFGMFPPPHKNSLVYPTYSSNGLSTPVAGYETA
Subjt:  ISKSPLSESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPPHKNSLVYPTYSSNGLSTPVAGYETA

Query:  DARRKVDPPTRAQKNMSADAVPFHAKDKA
        DARRKV+PPTRAQKNMSADAVPFHAKD+A
Subjt:  DARRKVDPPTRAQKNMSADAVPFHAKDKA

XP_023524364.1 RNA-binding protein 1-like [Cucurbita pepo subsp. pepo]1.1e-12797.82Show/hide
Query:  MINGTGMEDQFRGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGH
        M NGT MEDQFRGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGH
Subjt:  MINGTGMEDQFRGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGH

Query:  ISKSPLSESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPPHKNSLVYPTYSSNGLSTPVAGYETA
        ISKSPLSESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPPHKNSLVYPTYSSNGLSTPVAGYETA
Subjt:  ISKSPLSESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPPHKNSLVYPTYSSNGLSTPVAGYETA

Query:  DARRKVDPPTRAQKNMSADAVPFHAKDKA
        D RRKV+PP+RAQKNMSADAVPFHAKDKA
Subjt:  DARRKVDPPTRAQKNMSADAVPFHAKDKA

TrEMBL top hitse value%identityAlignment
A0A0A0L563 RRM domain-containing protein7.9e-6358.12Show/hide
Query:  DQFRGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHI-----SK
        DQ RGRKIFVGGLSAELTE++F++YFE FG++TDVVVM DSVT RPRGFGF+TF+S++SVDSVLQ NFHELNGRRVEVKRAIPKKGNYNG HI     +K
Subjt:  DQFRGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHI-----SK

Query:  SPL--SESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFF--GMFPPPHKNSLVYPTY-----SSNGLSTPV
        SPL     NV   YPYY  GY +YPGFT FP YG     YGS+ YGNWF P    +AS   W+ PNFF  GM PP  +NSL++P+      S NG++   
Subjt:  SPL--SESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFF--GMFPPPHKNSLVYPTY-----SSNGLSTPV

Query:  AGYETADARRKVDPPTRAQKNMSADAVPFHAKDK
         G        ++   T  ++ MSADA PF  KD+
Subjt:  AGYETADARRKVDPPTRAQKNMSADAVPFHAKDK

A0A5N6R9D7 Uncharacterized protein3.4e-4251.02Show/hide
Query:  EDQFRGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKSPLS
        ++QFR +KIFVGGLSA LTE++FKNYF++FGRVTDVVVM DS T RPRGFGFITFDS +SV++V+QN+FHELNGR VEVKRA+PK+ N        + + 
Subjt:  EDQFRGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKSPLS

Query:  ESNVLP-SYPYYSCGYTVYPGFTPFPPY-GPGFGLYGSDPYGNWFSPSFG---------PMASPAAWYAPNFF--GMFPPPHKNSLVYPTYSSNGL
             P S+P YS  Y + PG+ PFP + G G  LYG+  Y  W+ PS G         P+A    WY P     G FP P  ++ +YP Y + G+
Subjt:  ESNVLP-SYPYYSCGYTVYPGFTPFPPY-GPGFGLYGSDPYGNWFSPSFG---------PMASPAAWYAPNFF--GMFPPPHKNSLVYPTYSSNGL

A0A6J1C724 RNA-binding protein 1-like7.9e-5555.56Show/hide
Query:  DQFRGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGH--ISKSPL
        DQ RG+KIFVGGL ++LTE++FK+YFEKFG++TDVVVM+DSVT RPRGFGFITFDSV+SV+ VLQNNFHELNGRRVEVKRA+PK  N N  +    KSPL
Subjt:  DQFRGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGH--ISKSPL

Query:  SESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSDPYGNW-FSPSFG------PMASPAAWYAPNFF--GMFPPPHKNSLVYPTYSSNG--LSTPVA
        S  +V   YP++S G  VYPG+ PFP Y      YGS  YG+W ++  +G      P+   +AWYAPN F  GMFP P+ NS+++P YSS G  L  P+A
Subjt:  SESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSDPYGNW-FSPSFG------PMASPAAWYAPNFF--GMFPPPHKNSLVYPTYSSNG--LSTPVA

Query:  GYETADARRKVDPPTRAQKNMSADAVPFHAKDKA
        G              R   NMSADAVPF   ++A
Subjt:  GYETADARRKVDPPTRAQKNMSADAVPFHAKDKA

A0A6J1FS87 RNA-binding protein 1-like5.2e-131100Show/hide
Query:  MINGTGMEDQFRGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGH
        MINGTGMEDQFRGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGH
Subjt:  MINGTGMEDQFRGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGH

Query:  ISKSPLSESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPPHKNSLVYPTYSSNGLSTPVAGYETA
        ISKSPLSESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPPHKNSLVYPTYSSNGLSTPVAGYETA
Subjt:  ISKSPLSESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPPHKNSLVYPTYSSNGLSTPVAGYETA

Query:  DARRKVDPPTRAQKNMSADAVPFHAKDKA
        DARRKVDPPTRAQKNMSADAVPFHAKDKA
Subjt:  DARRKVDPPTRAQKNMSADAVPFHAKDKA

A0A6J1J2K5 RNA-binding protein 1-like4.1e-12897.82Show/hide
Query:  MINGTGMEDQFRGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGH
        M NGT MEDQFRGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGH
Subjt:  MINGTGMEDQFRGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGH

Query:  ISKSPLSESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPPHKNSLVYPTYSSNGLSTPVAGYETA
        ISKSPLSESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWY PNFFGMFPPPHKNSLVYPTYSSNGLSTPVAGYETA
Subjt:  ISKSPLSESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPPHKNSLVYPTYSSNGLSTPVAGYETA

Query:  DARRKVDPPTRAQKNMSADAVPFHAKDKA
        DARRKV+PPTRAQKNMSADAVPFHAKD+A
Subjt:  DARRKVDPPTRAQKNMSADAVPFHAKDKA

SwissProt top hitse value%identityAlignment
O88569 Heterogeneous nuclear ribonucleoproteins A2/B17.9e-2044.44Show/hide
Query:  ETVELAREQRMINGTGMEDQFRGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAI
        ETV L R++R       ++QF  RK+F+GGLS E TE+  +NY+E++G++TD VVMRD  +KR RGFGF+TF S+  VD+ +    H ++GR VE KRA+
Subjt:  ETVELAREQRMINGTGMEDQFRGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAI

Query:  PK-KGNYNGGHISKSPL
         + +    G H++   L
Subjt:  PK-KGNYNGGHISKSPL

P22626 Heterogeneous nuclear ribonucleoproteins A2/B17.9e-2044.44Show/hide
Query:  ETVELAREQRMINGTGMEDQFRGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAI
        ETV L R++R       ++QF  RK+F+GGLS E TE+  +NY+E++G++TD VVMRD  +KR RGFGF+TF S+  VD+ +    H ++GR VE KRA+
Subjt:  ETVELAREQRMINGTGMEDQFRGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAI

Query:  PK-KGNYNGGHISKSPL
         + +    G H++   L
Subjt:  PK-KGNYNGGHISKSPL

Q5RBU8 Heterogeneous nuclear ribonucleoproteins A2/B17.9e-2044.44Show/hide
Query:  ETVELAREQRMINGTGMEDQFRGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAI
        ETV L R++R       ++QF  RK+F+GGLS E TE+  +NY+E++G++TD VVMRD  +KR RGFGF+TF S+  VD+ +    H ++GR VE KRA+
Subjt:  ETVELAREQRMINGTGMEDQFRGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAI

Query:  PK-KGNYNGGHISKSPL
         + +    G H++   L
Subjt:  PK-KGNYNGGHISKSPL

Q8W034 Heterogeneous nuclear ribonucleoprotein 11.1e-2440.24Show/hide
Query:  LAREQRMING----------TGMEDQFRGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRV
        ++RE++ ++G          +G +   + +KIFVGGL   LT+++F+ YFE +G VTDV +M D  T RPRGFGF++FDS  +VDSVL   FH+L+G++V
Subjt:  LAREQRMING----------TGMEDQFRGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRV

Query:  EVKRAIPKKGNYNGGHISKSPLSESNVLPSYPYYSCGYTVYPG------FTPFPPYGPGFGLYGSDPYG
        EVKRA+PK  N  GG  S            Y  Y    + Y G      F      G G   YGS  YG
Subjt:  EVKRAIPKKGNYNGGHISKSPLSESNVLPSYPYYSCGYTVYPG------FTPFPPYGPGFGLYGSDPYG

Q9C652 RNA-binding protein 11.1e-2942.2Show/hide
Query:  LAREQRMINGTGMEDQFRG-----RKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRA
        L R+ + +NG   E    G     +KIFVGGLS+  TE++FK+YFE+FGR TDVVVM D VT RPRGFGF+T+DS  SV+ V+Q+NFHEL+ +RVEVKRA
Subjt:  LAREQRMINGTGMEDQFRG-----RKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRA

Query:  IPKKG--NYNGGHISKSPLSESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSD-PYGNWFSPSFGPMASPAAWYAPNFFGMFP----PPHKNSLVY
        IPK+G  + NG  ++  P   S     Y     GY +   F P P +G    +     PYG  F+     ++       P  F   P    PP  N+L Y
Subjt:  IPKKG--NYNGGHISKSPLSESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSD-PYGNWFSPSFGPMASPAAWYAPNFFGMFP----PPHKNSLVY

Query:  PTYSSNGL---STPVAGY
          Y  NG     T ++GY
Subjt:  PTYSSNGL---STPVAGY

Arabidopsis top hitse value%identityAlignment
AT1G58470.1 RNA-binding protein 17.9e-3142.2Show/hide
Query:  LAREQRMINGTGMEDQFRG-----RKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRA
        L R+ + +NG   E    G     +KIFVGGLS+  TE++FK+YFE+FGR TDVVVM D VT RPRGFGF+T+DS  SV+ V+Q+NFHEL+ +RVEVKRA
Subjt:  LAREQRMINGTGMEDQFRG-----RKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRA

Query:  IPKKG--NYNGGHISKSPLSESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSD-PYGNWFSPSFGPMASPAAWYAPNFFGMFP----PPHKNSLVY
        IPK+G  + NG  ++  P   S     Y     GY +   F P P +G    +     PYG  F+     ++       P  F   P    PP  N+L Y
Subjt:  IPKKG--NYNGGHISKSPLSESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSD-PYGNWFSPSFGPMASPAAWYAPNFFGMFP----PPHKNSLVY

Query:  PTYSSNGL---STPVAGY
          Y  NG     T ++GY
Subjt:  PTYSSNGL---STPVAGY

AT5G55550.1 RNA-binding (RRM/RBD/RNP motifs) family protein7.4e-2950.68Show/hide
Query:  RGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKSPLSE-SN
        R +KIFVGGL + +TE++FKNYF++FG + DVVVM D  T+RPRGFGFITFDS  +VD VL   FHELNG+ VEVKRA+PK+          SP+S   +
Subjt:  RGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKSPLSE-SN

Query:  VLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGS-DPYGNWFSPSFG
         L S   Y  G    P  + F  + PG G Y S  P G  FSP  G
Subjt:  VLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGS-DPYGNWFSPSFG

AT5G55550.2 RNA-binding (RRM/RBD/RNP motifs) family protein7.4e-2950.68Show/hide
Query:  RGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKSPLSE-SN
        R +KIFVGGL + +TE++FKNYF++FG + DVVVM D  T+RPRGFGFITFDS  +VD VL   FHELNG+ VEVKRA+PK+          SP+S   +
Subjt:  RGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKSPLSE-SN

Query:  VLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGS-DPYGNWFSPSFG
         L S   Y  G    P  + F  + PG G Y S  P G  FSP  G
Subjt:  VLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGS-DPYGNWFSPSFG

AT5G55550.3 RNA-binding (RRM/RBD/RNP motifs) family protein7.4e-2950.68Show/hide
Query:  RGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKSPLSE-SN
        R +KIFVGGL + +TE++FKNYF++FG + DVVVM D  T+RPRGFGFITFDS  +VD VL   FHELNG+ VEVKRA+PK+          SP+S   +
Subjt:  RGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKSPLSE-SN

Query:  VLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGS-DPYGNWFSPSFG
         L S   Y  G    P  + F  + PG G Y S  P G  FSP  G
Subjt:  VLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGS-DPYGNWFSPSFG

AT5G55550.4 RNA-binding (RRM/RBD/RNP motifs) family protein7.4e-2950.68Show/hide
Query:  RGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKSPLSE-SN
        R +KIFVGGL + +TE++FKNYF++FG + DVVVM D  T+RPRGFGFITFDS  +VD VL   FHELNG+ VEVKRA+PK+          SP+S   +
Subjt:  RGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGHISKSPLSE-SN

Query:  VLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGS-DPYGNWFSPSFG
         L S   Y  G    P  + F  + PG G Y S  P G  FSP  G
Subjt:  VLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGS-DPYGNWFSPSFG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTACGGAAAAGAAACTGTGGAGCTAGCTAGAGAACAAAGAATGATTAATGGTACTGGGATGGAAGATCAATTTAGGGGCAGAAAGATTTTTGTTGGAGGATTATC
GGCTGAATTGACTGAAGATGACTTCAAAAATTACTTTGAAAAGTTTGGTCGGGTAACTGACGTAGTCGTGATGCGTGATAGTGTAACTAAACGCCCTAGAGGATTTGGAT
TTATCACGTTTGATTCTGTACAATCCGTTGACTCTGTTCTTCAAAATAACTTTCATGAGTTAAATGGTAGGCGTGTGGAGGTGAAGAGAGCCATCCCAAAAAAGGGGAAC
TACAATGGCGGCCATATTTCCAAAAGCCCTCTTTCTGAAAGCAATGTTCTTCCCTCTTACCCATATTATAGCTGTGGTTATACAGTTTATCCTGGTTTTACACCTTTTCC
ACCTTATGGACCAGGTTTTGGTTTATATGGCTCAGACCCCTATGGGAATTGGTTTTCCCCCAGCTTTGGTCCCATGGCTTCACCAGCTGCATGGTATGCTCCAAATTTCT
TTGGAATGTTTCCTCCACCTCATAAAAATTCTCTAGTTTATCCAACGTATTCAAGCAATGGGCTATCTACTCCGGTGGCTGGATATGAAACTGCTGATGCGAGAAGAAAG
GTTGATCCCCCCACTCGTGCACAGAAAAATATGTCGGCTGACGCAGTGCCATTTCATGCTAAGGATAAAGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTACGGAAAAGAAACTGTGGAGCTAGCTAGAGAACAAAGAATGATTAATGGTACTGGGATGGAAGATCAATTTAGGGGCAGAAAGATTTTTGTTGGAGGATTATC
GGCTGAATTGACTGAAGATGACTTCAAAAATTACTTTGAAAAGTTTGGTCGGGTAACTGACGTAGTCGTGATGCGTGATAGTGTAACTAAACGCCCTAGAGGATTTGGAT
TTATCACGTTTGATTCTGTACAATCCGTTGACTCTGTTCTTCAAAATAACTTTCATGAGTTAAATGGTAGGCGTGTGGAGGTGAAGAGAGCCATCCCAAAAAAGGGGAAC
TACAATGGCGGCCATATTTCCAAAAGCCCTCTTTCTGAAAGCAATGTTCTTCCCTCTTACCCATATTATAGCTGTGGTTATACAGTTTATCCTGGTTTTACACCTTTTCC
ACCTTATGGACCAGGTTTTGGTTTATATGGCTCAGACCCCTATGGGAATTGGTTTTCCCCCAGCTTTGGTCCCATGGCTTCACCAGCTGCATGGTATGCTCCAAATTTCT
TTGGAATGTTTCCTCCACCTCATAAAAATTCTCTAGTTTATCCAACGTATTCAAGCAATGGGCTATCTACTCCGGTGGCTGGATATGAAACTGCTGATGCGAGAAGAAAG
GTTGATCCCCCCACTCGTGCACAGAAAAATATGTCGGCTGACGCAGTGCCATTTCATGCTAAGGATAAAGCTTGAAAGGATCCGTTTTGTACATGGAAACTTGGGATTTA
TGATTGGATTTGCTCTTGATCTTGTTATAAGGGCATTTAGTTTGTAAATTCTGTAGATTTGTCTAGTTCTTTCTATTATATTTTTTCTAATCTCTGTTTCTTTTAATCTG
CTTGTGAATTCATGGTCGTGTGGAACTCTCAGGCAACTGTTACAGTGGTTTTAGATTTTTTGTTATTATCTTTTATTAACATTTGAGACAATAAGGCCTGGTCTGGTCTG
TAGAAGAGGG
Protein sequenceShow/hide protein sequence
MVYGKETVELAREQRMINGTGMEDQFRGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGN
YNGGHISKSPLSESNVLPSYPYYSCGYTVYPGFTPFPPYGPGFGLYGSDPYGNWFSPSFGPMASPAAWYAPNFFGMFPPPHKNSLVYPTYSSNGLSTPVAGYETADARRK
VDPPTRAQKNMSADAVPFHAKDKA