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CmoCh01G018270 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G018270
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr01:13372094..13372606
RNA-Seq ExpressionCmoCh01G018270
SyntenyCmoCh01G018270
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064469.1 hypothetical protein E6C27_scaffold255G001840 [Cucumis melo var. makuwa]7.1e-4972.48Show/hide
Query:  NVPFSWEAKPGVPKLQSSSSPNVSTFERSALKLPSPPYRSESARLPDDYGEAIPCSSP--RAKSARMAKEHLWLEAYSDDFGSSFGFGCCKRDGLKERDP
        NVPFSWEAKPGVPK QS  SP+ S FE S LKLPSPP RSESARL  DY   I  S P  RA+SARMAK+ LWLEAYSD   SSFGFGCCK D  K+ DP
Subjt:  NVPFSWEAKPGVPKLQSSSSPNVSTFERSALKLPSPPYRSESARLPDDYGEAIPCSSP--RAKSARMAKEHLWLEAYSDDFGSSFGFGCCKRDGLKERDP

Query:  FVEAYKKCTNGPSKNRRPIGGGSATNGVKRPGIRRRILCSLSRKCCASS
        FVEAYKKCTN  S + R I GGSATNGVKRP I RR+L SLSRKCCASS
Subjt:  FVEAYKKCTNGPSKNRRPIGGGSATNGVKRPGIRRRILCSLSRKCCASS

KAG5230775.1 Stimulated by retinoic acid protein [Salix suchowensis]1.5e-0635.1Show/hide
Query:  ELLQTRTNVPFSWEAKPGVPKLQSSSSPNVSTFERSALKLPSPPYRSESARLP-DDYGEAIPCSSPRAKSARMAKEHLWLEAYSDDFGSSFGFGCCKRDG
        +++Q++ NVPFSWE KPGVPK+         T+    LKLP PP  S+  R P DD  +A+  SS                       SSF      + G
Subjt:  ELLQTRTNVPFSWEAKPGVPKLQSSSSPNVSTFERSALKLPSPPYRSESARLP-DDYGEAIPCSSPRAKSARMAKEHLWLEAYSDDFGSSFGFGCCKRDG

Query:  LK-ERDPFVEAYKKCTNGPSKNRRPIGGGSATNGVKRPGIRRRILCSLSRK
        ++ + DPF+ AYKKCT  P  N R    G A  G+ +  +R+    SLS K
Subjt:  LK-ERDPFVEAYKKCTNGPSKNRRPIGGGSATNGVKRPGIRRRILCSLSRK

KAG6608406.1 hypothetical protein SDJN03_01748, partial [Cucurbita argyrosperma subsp. sororia]4.9e-9097.65Show/hide
Query:  MASSSSSSHPLDFDFELLQTRTNVPFSWEAKPGVPKLQSSSSPNVSTFERSALKLPSPPYRSESARLPDDYGEAIPCSSPRAKSARMAKEHLWLEAYSDD
        MASSSSSSHPLDFDFELLQTRTNVPFSWEAKPGVPKLQSSSSPNVSTFERSALKLPSPPYRSESARLPDDYGEAIPCSSPRAKSARMAKEHLWL+AYSDD
Subjt:  MASSSSSSHPLDFDFELLQTRTNVPFSWEAKPGVPKLQSSSSPNVSTFERSALKLPSPPYRSESARLPDDYGEAIPCSSPRAKSARMAKEHLWLEAYSDD

Query:  FGSSFGFGCCKRDGLKERDPFVEAYKKCTNGPSKNRRPIGGGSATNGVKRPGIRRRILCSLSRKCCASSP
        FGSSFGFGCCKRDGLKE DPFVEAYKKCTNGPSKNRRPIGGGSATNGVKRPGIRRR+L SLSRKCCASSP
Subjt:  FGSSFGFGCCKRDGLKERDPFVEAYKKCTNGPSKNRRPIGGGSATNGVKRPGIRRRILCSLSRKCCASSP

KAG7037747.1 hypothetical protein SDJN02_01378, partial [Cucurbita argyrosperma subsp. argyrosperma]4.1e-8997.06Show/hide
Query:  MASSSSSSHPLDFDFELLQTRTNVPFSWEAKPGVPKLQSSSSPNVSTFERSALKLPSPPYRSESARLPDDYGEAIPCSSPRAKSARMAKEHLWLEAYSDD
        MASSSSSSHPLDFDFELLQTRTNVPFSWEAKPGVPKLQSSSSPNVSTFE SALKLPSPPYRSESARLPDDYGEAIPCSSPRAKSARMAKEHLWL+AYSDD
Subjt:  MASSSSSSHPLDFDFELLQTRTNVPFSWEAKPGVPKLQSSSSPNVSTFERSALKLPSPPYRSESARLPDDYGEAIPCSSPRAKSARMAKEHLWLEAYSDD

Query:  FGSSFGFGCCKRDGLKERDPFVEAYKKCTNGPSKNRRPIGGGSATNGVKRPGIRRRILCSLSRKCCASSP
        FGSSFGFGCCKRDGLKE DPFVEAYKKCTNGPSKNRRPIGGGSATNGVKRPGIRRR+L SLSRKCCASSP
Subjt:  FGSSFGFGCCKRDGLKERDPFVEAYKKCTNGPSKNRRPIGGGSATNGVKRPGIRRRILCSLSRKCCASSP

XP_004141298.1 uncharacterized protein LOC101203728 [Cucumis sativus]1.9e-4665.45Show/hide
Query:  SSSHPLDFDFELLQTRTNVPFSWEAKPGVPKLQSSSSPNVSTFERSA--LKLPSPPYRSESARLPDDYGEAIPCSSP--RAKSARMAKEHLWLEAYSDDF
        +SS P++ DFE L T+TNVPFSWEAKPGVPK QS  SP  S FE  A  LKLPSPP RSESARL  DY   I  S P  RA+SARMAK+ LWLEAYSD  
Subjt:  SSSHPLDFDFELLQTRTNVPFSWEAKPGVPKLQSSSSPNVSTFERSA--LKLPSPPYRSESARLPDDYGEAIPCSSP--RAKSARMAKEHLWLEAYSDDF

Query:  GSSFGFGCCKRDGLKERDPFVEAYKKCTNGPSKNRRPIGGGSATNGVKRPGIRRRILCSLSRKCC
         SSFGFGCCK D  K+ DPFVEAYKKC     +N R I G SATNG KRP I RR+L SLSR  C
Subjt:  GSSFGFGCCKRDGLKERDPFVEAYKKCTNGPSKNRRPIGGGSATNGVKRPGIRRRILCSLSRKCC

TrEMBL top hitse value%identityAlignment
A0A061FEE8 Uncharacterized protein6.8e-0535.29Show/hide
Query:  LLQTRTNVPFSWEAKPGVPKLQSSSSPNVSTFERSALKLPSPPYRSESARLP--DDYGEAIPCSSPRAKSARMAKEHLWLEAYSDDFGSSFGFGCCKRDG
        ++ ++ NVPFSWE KPGV KL S        F +   KLPSPPY  ESAR+   D      PC                  A+   F +S   G  K D 
Subjt:  LLQTRTNVPFSWEAKPGVPKLQSSSSPNVSTFERSALKLPSPPYRSESARLP--DDYGEAIPCSSPRAKSARMAKEHLWLEAYSDDFGSSFGFGCCKRDG

Query:  LKERDPFVEAYKKCTNGPSKNR--RPIGGGSATNGV
            DPF+ AYK+CT   SK +  +  GG     G+
Subjt:  LKERDPFVEAYKKCTNGPSKNR--RPIGGGSATNGV

A0A0A0KZZ9 Uncharacterized protein4.5e-4966.67Show/hide
Query:  SSSHPLDFDFELLQTRTNVPFSWEAKPGVPKLQSSSSPNVSTFERSA--LKLPSPPYRSESARLPDDYGEAIPCSSP--RAKSARMAKEHLWLEAYSDDF
        +SS P++ DFE L T+TNVPFSWEAKPGVPK QS  SP  S FE  A  LKLPSPP RSESARL  DY   I  S P  RA+SARMAK+ LWLEAYSD  
Subjt:  SSSHPLDFDFELLQTRTNVPFSWEAKPGVPKLQSSSSPNVSTFERSA--LKLPSPPYRSESARLPDDYGEAIPCSSP--RAKSARMAKEHLWLEAYSDDF

Query:  GSSFGFGCCKRDGLKERDPFVEAYKKCTNGPSKNRRPIGGGSATNGVKRPGIRRRILCSLSRKCCASS
         SSFGFGCCK D  K+ DPFVEAYKKC     +N R I G SATNG KRP I RR+L SLSRKC ASS
Subjt:  GSSFGFGCCKRDGLKERDPFVEAYKKCTNGPSKNRRPIGGGSATNGVKRPGIRRRILCSLSRKCCASS

A0A5D3D9E3 Uncharacterized protein3.5e-4972.48Show/hide
Query:  NVPFSWEAKPGVPKLQSSSSPNVSTFERSALKLPSPPYRSESARLPDDYGEAIPCSSP--RAKSARMAKEHLWLEAYSDDFGSSFGFGCCKRDGLKERDP
        NVPFSWEAKPGVPK QS  SP+ S FE S LKLPSPP RSESARL  DY   I  S P  RA+SARMAK+ LWLEAYSD   SSFGFGCCK D  K+ DP
Subjt:  NVPFSWEAKPGVPKLQSSSSPNVSTFERSALKLPSPPYRSESARLPDDYGEAIPCSSP--RAKSARMAKEHLWLEAYSDDFGSSFGFGCCKRDGLKERDP

Query:  FVEAYKKCTNGPSKNRRPIGGGSATNGVKRPGIRRRILCSLSRKCCASS
        FVEAYKKCTN  S + R I GGSATNGVKRP I RR+L SLSRKCCASS
Subjt:  FVEAYKKCTNGPSKNRRPIGGGSATNGVKRPGIRRRILCSLSRKCCASS

A0A5N5K708 Uncharacterized protein1.2e-0434.44Show/hide
Query:  ELLQTRTNVPFSWEAKPGVPKLQSSSSPNVSTFERSALKLPSPPYR-SESARLPDDYGEAIPCSSPRAKSARMAKEHLWLEAYSDDFGSSFGFGCCKRDG
        +++Q++ NVPFSWE KPGV K+       V T+    LKLP PP R S+S R P D    +                  L A S  F          + G
Subjt:  ELLQTRTNVPFSWEAKPGVPKLQSSSSPNVSTFERSALKLPSPPYR-SESARLPDDYGEAIPCSSPRAKSARMAKEHLWLEAYSDDFGSSFGFGCCKRDG

Query:  LK-ERDPFVEAYKKCTNGPSKNRRPIGGGSATNGVKRPGIRRRILCSLSRK
        ++ + DPF  AYKKCT  P  N R    G A  G +   +R+    SLS K
Subjt:  LK-ERDPFVEAYKKCTNGPSKNRRPIGGGSATNGVKRPGIRRRILCSLSRK

A0A6J1ADZ8 uncharacterized protein LOC1104171486.8e-0535.82Show/hide
Query:  LLQTRTNVPFSWEAKPGVPKLQSSSSPNVSTFERSALKLPSPPYRSESARLPDDYGEAIPCSSPRAKSARMAKEHLWLEAYSDDFGSSFGFGCCKRDGLK
        ++ ++ NVPFSWE KPGV KL S        F +   KLPSPPY  ESAR+   +G  IP   P               A+   F +S      +R   K
Subjt:  LLQTRTNVPFSWEAKPGVPKLQSSSSPNVSTFERSALKLPSPPYRSESARLPDDYGEAIPCSSPRAKSARMAKEHLWLEAYSDDFGSSFGFGCCKRDGLK

Query:  ERDPFVEAYKKCTNGPSKNR--RPIGGGSATNGV
          DPF+ AYK+CT   SK +  +  GG     G+
Subjt:  ERDPFVEAYKKCTNGPSKNR--RPIGGGSATNGV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGTTCGAGTTCGAGTTCTCATCCACTGGACTTTGATTTCGAACTCCTTCAAACGAGGACGAACGTGCCGTTCTCTTGGGAGGCCAAGCCGGGGGTTCCGAAGCT
ACAATCGAGTTCCAGCCCTAACGTAAGCACGTTCGAGAGATCAGCGTTGAAATTGCCTTCGCCGCCGTACCGATCGGAGAGTGCTAGGCTTCCCGATGACTACGGTGAGG
CGATCCCCTGTTCTTCTCCGCGAGCGAAGAGTGCGAGGATGGCTAAGGAACATTTGTGGCTTGAAGCTTATTCCGACGACTTTGGATCGTCTTTTGGTTTCGGGTGCTGT
AAACGGGATGGTTTGAAGGAGAGAGATCCTTTTGTTGAAGCCTATAAGAAATGCACAAACGGCCCTTCGAAGAACCGTCGGCCAATCGGCGGCGGTTCTGCAACAAATGG
AGTTAAACGTCCTGGTATTAGACGAAGAATACTTTGTTCACTTTCACGGAAGTGCTGCGCTTCATCCCCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAGTTCGAGTTCGAGTTCTCATCCACTGGACTTTGATTTCGAACTCCTTCAAACGAGGACGAACGTGCCGTTCTCTTGGGAGGCCAAGCCGGGGGTTCCGAAGCT
ACAATCGAGTTCCAGCCCTAACGTAAGCACGTTCGAGAGATCAGCGTTGAAATTGCCTTCGCCGCCGTACCGATCGGAGAGTGCTAGGCTTCCCGATGACTACGGTGAGG
CGATCCCCTGTTCTTCTCCGCGAGCGAAGAGTGCGAGGATGGCTAAGGAACATTTGTGGCTTGAAGCTTATTCCGACGACTTTGGATCGTCTTTTGGTTTCGGGTGCTGT
AAACGGGATGGTTTGAAGGAGAGAGATCCTTTTGTTGAAGCCTATAAGAAATGCACAAACGGCCCTTCGAAGAACCGTCGGCCAATCGGCGGCGGTTCTGCAACAAATGG
AGTTAAACGTCCTGGTATTAGACGAAGAATACTTTGTTCACTTTCACGGAAGTGCTGCGCTTCATCCCCGTGA
Protein sequenceShow/hide protein sequence
MASSSSSSHPLDFDFELLQTRTNVPFSWEAKPGVPKLQSSSSPNVSTFERSALKLPSPPYRSESARLPDDYGEAIPCSSPRAKSARMAKEHLWLEAYSDDFGSSFGFGCC
KRDGLKERDPFVEAYKKCTNGPSKNRRPIGGGSATNGVKRPGIRRRILCSLSRKCCASSP