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CmoCh01G018410 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G018410
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionZCF37, putative
Genome locationCmo_Chr01:13434947..13435774
RNA-Seq ExpressionCmoCh01G018410
SyntenyCmoCh01G018410
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608423.1 hypothetical protein SDJN03_01765, partial [Cucurbita argyrosperma subsp. sororia]3.8e-6794.56Show/hide
Query:  MPQESLSSNGSPHCTPRKPRNGLKPHSKDKKNPYSDRGLDKFSALLTDLEQKRKQIYARTDPENIVLVRFAYKNSDECVPVVVKQKEKKEEKRVNDIKPA
        M QESLSSNGSPHCTPRK RNGLKPHSKDKKNPYSDRGLDKFSALLTDLEQKRKQIYA+TDPENIVLVRFAYKNSDECVPVVVKQKEKKEEKRVNDIKPA
Subjt:  MPQESLSSNGSPHCTPRKPRNGLKPHSKDKKNPYSDRGLDKFSALLTDLEQKRKQIYARTDPENIVLVRFAYKNSDECVPVVVKQKEKKEEKRVNDIKPA

Query:  ITQKQADKKILVRGRT---LRKLRKPEFVEIKNINETKGVCKDFDSK
        ITQKQADKK LVR RT   LRKLRKPEFVEIKNINETKGVCKDFDSK
Subjt:  ITQKQADKKILVRGRT---LRKLRKPEFVEIKNINETKGVCKDFDSK
XP_022941133.1 uncharacterized protein LOC111446521 [Cucurbita moschata]7.8e-73100Show/hide
Query:  MPQESLSSNGSPHCTPRKPRNGLKPHSKDKKNPYSDRGLDKFSALLTDLEQKRKQIYARTDPENIVLVRFAYKNSDECVPVVVKQKEKKEEKRVNDIKPA
        MPQESLSSNGSPHCTPRKPRNGLKPHSKDKKNPYSDRGLDKFSALLTDLEQKRKQIYARTDPENIVLVRFAYKNSDECVPVVVKQKEKKEEKRVNDIKPA
Subjt:  MPQESLSSNGSPHCTPRKPRNGLKPHSKDKKNPYSDRGLDKFSALLTDLEQKRKQIYARTDPENIVLVRFAYKNSDECVPVVVKQKEKKEEKRVNDIKPA

Query:  ITQKQADKKILVRGRTLRKLRKPEFVEIKNINETKGVCKDFDSK
        ITQKQADKKILVRGRTLRKLRKPEFVEIKNINETKGVCKDFDSK
Subjt:  ITQKQADKKILVRGRTLRKLRKPEFVEIKNINETKGVCKDFDSK
XP_022981899.1 uncharacterized protein LOC111480901 [Cucurbita maxima]1.9e-6693.06Show/hide
Query:  MPQESLSSNGSPHCTPRKPRNGLKPHSKDKKNPYSDRGLDKFSALLTDLEQKRKQIYARTDPENIVLVRFAYKNSDECVPVVVKQKEKKEEKRVNDIKPA
        M QESLSSNGSPHCTPRK RNGLKPHSKDKKNPYSDRGLDKFSALLTDLE+KRK+IYA+TDPENIVLVRFAYKNSDECVPVVVKQKEKKEEKRVNDIKPA
Subjt:  MPQESLSSNGSPHCTPRKPRNGLKPHSKDKKNPYSDRGLDKFSALLTDLEQKRKQIYARTDPENIVLVRFAYKNSDECVPVVVKQKEKKEEKRVNDIKPA

Query:  ITQKQADKKILVRGRTLRKLRKPEFVEIKNINETKGVCKDFDSK
        ITQKQ DKK LVR RTLRKLRKPEFVEIKNINE KG+CKDFDSK
Subjt:  ITQKQADKKILVRGRTLRKLRKPEFVEIKNINETKGVCKDFDSK
XP_023524394.1 uncharacterized protein LOC111788300 [Cucurbita pepo subsp. pepo]9.0e-5389.6Show/hide
Query:  MPQESLSSNGSPHCTPRKPRNGLKPHSKDKKNPYSDRGLDKFSALLTDLEQKRKQIYARTDPENIVLVRFAYKNSDECVPVVVKQKEKKEEKRVNDIKPA
        M QESLSSNGSP C+PRK RNGLKPHSKDKKNPYSDRGLDKFSALLTDLE+KRK+IYA+TDPENIVLVRFAYKNSDECVPVVVKQK+KKEEKRVNDIKPA
Subjt:  MPQESLSSNGSPHCTPRKPRNGLKPHSKDKKNPYSDRGLDKFSALLTDLEQKRKQIYARTDPENIVLVRFAYKNSDECVPVVVKQKEKKEEKRVNDIKPA

Query:  ITQKQADKKILVRGRTLRKLRKPEF
        ITQKQ DKK LVR RTLRKLRKP +
Subjt:  ITQKQADKKILVRGRTLRKLRKPEF
XP_023536130.1 uncharacterized protein LOC111797376 [Cucurbita pepo subsp. pepo]2.7e-3364Show/hide
Query:  SPHCTPRKPRNGLKPHSKDKKNPYSDRGLDKFSALLTDLEQKRKQIYARTDPENIVLVRFAYKNSDECVPVVVKQKEKKEEKRVNDIKPAITQ-------
        SP+ TP+K RNGLK H++DKKNPYSDRGLDKFSALLTDLEQKRK+IY++TDPENIV++RFAYKNS ECVPVVVKQK+KKE+K   D +   T+       
Subjt:  SPHCTPRKPRNGLKPHSKDKKNPYSDRGLDKFSALLTDLEQKRKQIYARTDPENIVLVRFAYKNSDECVPVVVKQKEKKEEKRVNDIKPAITQ-------

Query:  ---KQADKKILVRGRTLRKLRKPEF
           K +DKK  +R R LR+L KP +
Subjt:  ---KQADKKILVRGRTLRKLRKPEF
TrEMBL top hitse value%identityAlignment
A0A5D3D9A0 Putative ZCF378.6e-3362.02Show/hide
Query:  SLSSNGSPHCTPRKPRNGLKPHSKDKKNPYSDRGLDKFSALLTDLEQKRKQIYARTDPENIVLVRFAYKNSDECVPVVVKQKEKKEEKRVNDIKPAITQK
        +L  + SP+ TP+K RNG K H+KDKKNPYSDRGLDKFSALLTDL++KRK+IY++TDPE IV+VRFAYKNSDECVPVVVKQK+KKEEK  +D +    +K
Subjt:  SLSSNGSPHCTPRKPRNGLKPHSKDKKNPYSDRGLDKFSALLTDLEQKRKQIYARTDPENIVLVRFAYKNSDECVPVVVKQKEKKEEKRVNDIKPAITQK

Query:  QADKK--------ILVRGRTLRKLRKPEF
            K         LVR R LR+L KP +
Subjt:  QADKK--------ILVRGRTLRKLRKPEF
A0A6J1F7X7 uncharacterized protein LOC1114429265.0e-3363.2Show/hide
Query:  SPHCTPRKPRNGLKPHSKDKKNPYSDRGLDKFSALLTDLEQKRKQIYARTDPENIVLVRFAYKNSDECVPVVVKQKEKKEEKRVNDIKPAITQ-------
        SP+ TP+K R+GLK H++DKKNPYSDRGLDKFSALLTDLEQKRK+IY++TDPENIV++RFAYKNS ECVPVVVKQK+KKE+K   D +   T+       
Subjt:  SPHCTPRKPRNGLKPHSKDKKNPYSDRGLDKFSALLTDLEQKRKQIYARTDPENIVLVRFAYKNSDECVPVVVKQKEKKEEKRVNDIKPAITQ-------

Query:  ---KQADKKILVRGRTLRKLRKPEF
           K +DKK  +R R LR+L KP +
Subjt:  ---KQADKKILVRGRTLRKLRKPEF
A0A6J1FR85 uncharacterized protein LOC1114465213.8e-73100Show/hide
Query:  MPQESLSSNGSPHCTPRKPRNGLKPHSKDKKNPYSDRGLDKFSALLTDLEQKRKQIYARTDPENIVLVRFAYKNSDECVPVVVKQKEKKEEKRVNDIKPA
        MPQESLSSNGSPHCTPRKPRNGLKPHSKDKKNPYSDRGLDKFSALLTDLEQKRKQIYARTDPENIVLVRFAYKNSDECVPVVVKQKEKKEEKRVNDIKPA
Subjt:  MPQESLSSNGSPHCTPRKPRNGLKPHSKDKKNPYSDRGLDKFSALLTDLEQKRKQIYARTDPENIVLVRFAYKNSDECVPVVVKQKEKKEEKRVNDIKPA

Query:  ITQKQADKKILVRGRTLRKLRKPEFVEIKNINETKGVCKDFDSK
        ITQKQADKKILVRGRTLRKLRKPEFVEIKNINETKGVCKDFDSK
Subjt:  ITQKQADKKILVRGRTLRKLRKPEFVEIKNINETKGVCKDFDSK
A0A6J1IHN8 uncharacterized protein LOC1114763723.8e-3363.2Show/hide
Query:  SPHCTPRKPRNGLKPHSKDKKNPYSDRGLDKFSALLTDLEQKRKQIYARTDPENIVLVRFAYKNSDECVPVVVKQKEKKEEKRVNDIKPAITQ-------
        SP+ TP+K RNGLK H++DKKNPYSDRGLDKFSALLTDLE+KRK+IY++TDPENIV+VRFAYKNS ECVPVVVKQK+KKE+K   D +   T+       
Subjt:  SPHCTPRKPRNGLKPHSKDKKNPYSDRGLDKFSALLTDLEQKRKQIYARTDPENIVLVRFAYKNSDECVPVVVKQKEKKEEKRVNDIKPAITQ-------

Query:  ---KQADKKILVRGRTLRKLRKPEF
           K +D+K  +R R LR+L KP +
Subjt:  ---KQADKKILVRGRTLRKLRKPEF
A0A6J1J337 uncharacterized protein LOC1114809019.1e-6793.06Show/hide
Query:  MPQESLSSNGSPHCTPRKPRNGLKPHSKDKKNPYSDRGLDKFSALLTDLEQKRKQIYARTDPENIVLVRFAYKNSDECVPVVVKQKEKKEEKRVNDIKPA
        M QESLSSNGSPHCTPRK RNGLKPHSKDKKNPYSDRGLDKFSALLTDLE+KRK+IYA+TDPENIVLVRFAYKNSDECVPVVVKQKEKKEEKRVNDIKPA
Subjt:  MPQESLSSNGSPHCTPRKPRNGLKPHSKDKKNPYSDRGLDKFSALLTDLEQKRKQIYARTDPENIVLVRFAYKNSDECVPVVVKQKEKKEEKRVNDIKPA

Query:  ITQKQADKKILVRGRTLRKLRKPEFVEIKNINETKGVCKDFDSK
        ITQKQ DKK LVR RTLRKLRKPEFVEIKNINE KG+CKDFDSK
Subjt:  ITQKQADKKILVRGRTLRKLRKPEFVEIKNINETKGVCKDFDSK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G10220.1 BEST Arabidopsis thaliana protein match is: ZCF37 (TAIR:AT1G59590.1)1.9e-1651.72Show/hide
Query:  SPHCTPRKPRNGLKPHSKDKKNPYSDRGLDKFSALLTDLEQKRKQIYA-RTDPENIVLVRFAYKNSDECVPVVVKQKEKKEEKRVND
        SP  +PR+ R G    +K+ KNPYS++GLDKFSALL++L++KR+ IYA R DP+   LVRF + +S ECVPV++K K   ++K V D
Subjt:  SPHCTPRKPRNGLKPHSKDKKNPYSDRGLDKFSALLTDLEQKRKQIYA-RTDPENIVLVRFAYKNSDECVPVVVKQKEKKEEKRVND
AT1G59590.1 ZCF374.1e-1137.3Show/hide
Query:  RKPRNGLKPHSKDKKNPYSDRGLDKFSALLTDLEQKRKQIYA-RTDPENIVLVRFAYKNSDECVPVVVK----QKEKKEEKRV------NDIKPAITQ--
        R P +  K   K  KNPYS+RGLDKFS LL++L++KR+ IY+ + D     LVRF + +S ECVPVV++     K+ K+ K V       ++K A T+  
Subjt:  RKPRNGLKPHSKDKKNPYSDRGLDKFSALLTDLEQKRKQIYA-RTDPENIVLVRFAYKNSDECVPVVVK----QKEKKEEKRV------NDIKPAITQ--

Query:  -----KQADKKILVRGRTLRKLRKPE
             +   K+  V    L+K+ +P+
Subjt:  -----KQADKKILVRGRTLRKLRKPE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCAAGAATCGCTGTCCTCTAATGGCAGCCCCCATTGTACTCCAAGGAAGCCCAGAAATGGCCTCAAACCCCACAGCAAAGACAAGAAGAACCCTTACTCCGACCG
TGGCCTCGACAAATTCTCTGCTCTTTTAACCGATCTTGAACAGAAAAGGAAGCAAATTTACGCTCGAACTGACCCAGAAAACATTGTTTTGGTCCGTTTTGCTTACAAGA
ATTCAGATGAGTGTGTTCCTGTGGTTGTGAAACAGAAGGAGAAGAAAGAGGAGAAGCGTGTGAATGATATCAAACCGGCAATAACCCAGAAGCAGGCCGACAAGAAGATC
CTCGTACGAGGGAGAACTTTGAGGAAATTGAGGAAACCAGAGTTCGTCGAGATCAAGAACATCAATGAAACGAAAGGAGTATGCAAGGATTTTGACTCGAAATAA
mRNA sequenceShow/hide mRNA sequence
ACAGCCCATTTGAAGATTTTAATTTGACAAAACTAACTGCTTGGATCTGGATTCCATAAATGGTTGTAATGCTCATCATTTCCTTCCATCAATCCACCCAAATAAACCCT
TTTCTTCTCCATCACTAATGCCTCAAGAATCGCTGTCCTCTAATGGCAGCCCCCATTGTACTCCAAGGAAGCCCAGAAATGGCCTCAAACCCCACAGCAAAGACAAGAAG
AACCCTTACTCCGACCGTGGCCTCGACAAATTCTCTGCTCTTTTAACCGATCTTGAACAGAAAAGGAAGCAAATTTACGCTCGAACTGACCCAGAAAACATTGTTTTGGT
CCGTTTTGCTTACAAGAATTCAGATGAGTGTGTTCCTGTGGTTGTGAAACAGAAGGAGAAGAAAGAGGAGAAGCGTGTGAATGATATCAAACCGGCAATAACCCAGAAGC
AGGCCGACAAGAAGATCCTCGTACGAGGGAGAACTTTGAGGAAATTGAGGAAACCAGAGTTCGTCGAGATCAAGAACATCAATGAAACGAAAGGAGTATGCAAGGATTTT
GACTCGAAATAAGAAGTGTGAACCACCAATTTGATCTTTGGTTGTGGGTAAGATTGTTTAGTTTGTTGTTTTTGTTTGATGTTTGATGGGGTTGGATTTGAAATTGGATT
CGACTTCGATGAACAATGGGTAATGTAAATTAATTAGAGGGGGTAGTTAGGG
Protein sequenceShow/hide protein sequence
MPQESLSSNGSPHCTPRKPRNGLKPHSKDKKNPYSDRGLDKFSALLTDLEQKRKQIYARTDPENIVLVRFAYKNSDECVPVVVKQKEKKEEKRVNDIKPAITQKQADKKI
LVRGRTLRKLRKPEFVEIKNINETKGVCKDFDSK