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CmoCh01G018530 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G018530
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr01:13489766..13497117
RNA-Seq ExpressionCmoCh01G018530
SyntenyCmoCh01G018530
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608434.1 hypothetical protein SDJN03_01776, partial [Cucurbita argyrosperma subsp. sororia]2.4e-3291.36Show/hide
Query:  GTLSSSSSLRAFDTLRKADGVGAVYQHV----LDKHDYDTIRLIQYNTNTHDCSPTSEGREMVGIVVRKHLAHCAAKRMDG
        GTLSSSSSLRAFDT RKADGVGAVYQHV    LDKHDYDTIRL+QYNTNTHDCSPTSEGREMVGIVVRKHLAH AAKRMDG
Subjt:  GTLSSSSSLRAFDTLRKADGVGAVYQHV----LDKHDYDTIRLIQYNTNTHDCSPTSEGREMVGIVVRKHLAHCAAKRMDG
KAG7037769.1 hypothetical protein SDJN02_01400 [Cucurbita argyrosperma subsp. argyrosperma]1.2e-3660.13Show/hide
Query:  MAESLTDCLLPKHYT---NGSLLSPKLENQSAVDERQNALCSAPRKMG--YIIRCSAFKNANIRLEINMVFYRQGVGTLSSSSSLRAFDTLRKADGVGAV
        MAESLTDCLLPK  T      LL     +     + +      P K G  +++     K     +  + +  + G  + SSSSSLRAFDT RKADGVGAV
Subjt:  MAESLTDCLLPKHYT---NGSLLSPKLENQSAVDERQNALCSAPRKMG--YIIRCSAFKNANIRLEINMVFYRQGVGTLSSSSSLRAFDTLRKADGVGAV

Query:  YQHVLDKHDYDTIRLIQYNTNTHDCSPTSEGREMVGIVVRKHLAHCAAKRMDG
        YQHVLDKHDYDTIRLIQYNTNTHDCSPTSEGREMVGIVVRKHLAH AAKRMDG
Subjt:  YQHVLDKHDYDTIRLIQYNTNTHDCSPTSEGREMVGIVVRKHLAHCAAKRMDG
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAATCGTTGACAGATTGTTTATTACCCAAGCATTACACTAATGGATCCTTGCTTTCCCCCAAATTGGAAAACCAGTCAGCAGTCGATGAACGTCAGAATGCATT
GTGTAGTGCACCAAGAAAGATGGGCTACATAATTAGATGCTCCGCATTTAAGAACGCTAATATTAGGTTGGAGATCAATATGGTCTTTTACAGACAGGGAGTTGGTACAC
TTTCCTCTTCCTCTTCCCTGCGTGCTTTTGACACTCTTAGAAAAGCTGATGGGGTGGGTGCAGTGTATCAACACGTTTTAGACAAACATGACTATGATACAATTCGTCTC
ATACAATACAACACCAACACACACGATTGTTCCCCCACTTCTGAGGGAAGAGAAATGGTGGGCATAGTAGTACGTAAGCATTTGGCGCACTGCGCGGCGAAGCGAATGGA
TGGATGA
mRNA sequenceShow/hide mRNA sequence
TCCTTAACCCTCTCTCGCTCTCTCTGCAACTACGAATCTCTCTATCTTTTTCTCTCTCTTCTTCATAGCTCGCGTGGAAGTTCCTTCGCGCTCTTGTTTATGGCGGAATC
GTTGACAGATTGTTTATTACCCAAGCATTACACTAATGGATCCTTGCTTTCCCCCAAATTGGAAAACCAGTCAGCAGTCGATGAACGTCAGAATGCATTGTGTAGTGCAC
CAAGAAAGATGGGCTACATAATTAGATGCTCCGCATTTAAGAACGCTAATATTAGGTTGGAGATCAATATGGTCTTTTACAGACAGGGAGTTGGTACACTTTCCTCTTCC
TCTTCCCTGCGTGCTTTTGACACTCTTAGAAAAGCTGATGGGGTGGGTGCAGTGTATCAACACGTTTTAGACAAACATGACTATGATACAATTCGTCTCATACAATACAA
CACCAACACACACGATTGTTCCCCCACTTCTGAGGGAAGAGAAATGGTGGGCATAGTAGTACGTAAGCATTTGGCGCACTGCGCGGCGAAGCGAATGGATGGATGA
Protein sequenceShow/hide protein sequence
MAESLTDCLLPKHYTNGSLLSPKLENQSAVDERQNALCSAPRKMGYIIRCSAFKNANIRLEINMVFYRQGVGTLSSSSSLRAFDTLRKADGVGAVYQHVLDKHDYDTIRL
IQYNTNTHDCSPTSEGREMVGIVVRKHLAHCAAKRMDG