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CmoCh01G018540 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G018540
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionGlycosyl hydrolase family 35 protein
Genome locationCmo_Chr01:13497830..13498791
RNA-Seq ExpressionCmoCh01G018540
SyntenyCmoCh01G018540
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608435.1 hypothetical protein SDJN03_01777, partial [Cucurbita argyrosperma subsp. sororia]2.1e-7197.83Show/hide
Query:  CLCVCVSELFDSSWVLSVMNLSGFWVVFLLLQLTSFLPFFPSYINASSASDMAVNHHHVNPNGCSSDMPLNRKLKFQAADEHNKKKGHPSDVNLDDYHPI
        C+CVCVSELFDSSWVLSVMNLSGFWVVFLLLQLTSFLPFFPSYINASSASDMAVNHHHVNPNGC SDMP NRKLKFQAADEHNKKKGHPSDVNLDDYHPI
Subjt:  CLCVCVSELFDSSWVLSVMNLSGFWVVFLLLQLTSFLPFFPSYINASSASDMAVNHHHVNPNGCSSDMPLNRKLKFQAADEHNKKKGHPSDVNLDDYHPI

Query:  DPVPSSKTSVKPGPIEHGVPLLPHMPNPPPPAEPGDYA
        DPVPSSKTSVKPGPIEHGVPLLPHMPNPPPPAEPGDYA
Subjt:  DPVPSSKTSVKPGPIEHGVPLLPHMPNPPPPAEPGDYA

XP_022941192.1 uncharacterized protein LOC111446569 isoform X1 [Cucurbita moschata]6.8e-86100Show/hide
Query:  MDDPLPTFLPLTLLAQQGVCVCLCVCVSELFDSSWVLSVMNLSGFWVVFLLLQLTSFLPFFPSYINASSASDMAVNHHHVNPNGCSSDMPLNRKLKFQAA
        MDDPLPTFLPLTLLAQQGVCVCLCVCVSELFDSSWVLSVMNLSGFWVVFLLLQLTSFLPFFPSYINASSASDMAVNHHHVNPNGCSSDMPLNRKLKFQAA
Subjt:  MDDPLPTFLPLTLLAQQGVCVCLCVCVSELFDSSWVLSVMNLSGFWVVFLLLQLTSFLPFFPSYINASSASDMAVNHHHVNPNGCSSDMPLNRKLKFQAA

Query:  DEHNKKKGHPSDVNLDDYHPIDPVPSSKTSVKPGPIEHGVPLLPHMPNPPPPAEPGDYA
        DEHNKKKGHPSDVNLDDYHPIDPVPSSKTSVKPGPIEHGVPLLPHMPNPPPPAEPGDYA
Subjt:  DEHNKKKGHPSDVNLDDYHPIDPVPSSKTSVKPGPIEHGVPLLPHMPNPPPPAEPGDYA

XP_022941193.1 uncharacterized protein LOC111446569 isoform X2 [Cucurbita moschata]5.4e-8398.74Show/hide
Query:  MDDPLPTFLPLTLLAQQGVCVCLCVCVSELFDSSWVLSVMNLSGFWVVFLLLQLTSFLPFFPSYINASSASDMAVNHHHVNPNGCSSDMPLNRKLKFQAA
        MDDPLPTFLPLTLLAQQGVCVCLCVCVSELFDSSWVLSVMNLSGFWVVFLLLQLTSFLPFFPSYINASSASDMAVNHHHVNPNGCSSDMPLNRKLK  AA
Subjt:  MDDPLPTFLPLTLLAQQGVCVCLCVCVSELFDSSWVLSVMNLSGFWVVFLLLQLTSFLPFFPSYINASSASDMAVNHHHVNPNGCSSDMPLNRKLKFQAA

Query:  DEHNKKKGHPSDVNLDDYHPIDPVPSSKTSVKPGPIEHGVPLLPHMPNPPPPAEPGDYA
        DEHNKKKGHPSDVNLDDYHPIDPVPSSKTSVKPGPIEHGVPLLPHMPNPPPPAEPGDYA
Subjt:  DEHNKKKGHPSDVNLDDYHPIDPVPSSKTSVKPGPIEHGVPLLPHMPNPPPPAEPGDYA

XP_022981993.1 uncharacterized protein LOC111480979 isoform X1 [Cucurbita maxima]8.4e-6883.02Show/hide
Query:  MDDPLPTFLPLTLLAQQGVCVCLCVCVSELFDSSWVLSVMNLSGFWVVFLLLQLTSFLPFFPSYINASSASDMAVNHHHVNPNGCSSDMPLNRKLKFQAA
        MDDP     P       G   C+CVCVSELFDSSWVLSVMNLSGFW V LLLQLTSFLP FP+YINASSAS+MAVNHHHVNPNGC SDMPLNRKLKFQAA
Subjt:  MDDPLPTFLPLTLLAQQGVCVCLCVCVSELFDSSWVLSVMNLSGFWVVFLLLQLTSFLPFFPSYINASSASDMAVNHHHVNPNGCSSDMPLNRKLKFQAA

Query:  DEHNKKKGHPSDVNLDDYHPIDPVPSSKTSVKPGPIEHGVPLLPHMPNPPPPAEPGDYA
        DEHNKKK HPS VNLDDYHPIDPVPSSKTS+KPGPIEHG PLLPHMPNPPPPA+PGDYA
Subjt:  DEHNKKKGHPSDVNLDDYHPIDPVPSSKTSVKPGPIEHGVPLLPHMPNPPPPAEPGDYA

XP_023525729.1 uncharacterized protein LOC111789247 [Cucurbita pepo subsp. pepo]9.5e-8093.17Show/hide
Query:  MDDPLPTFLPLTLLAQQGVC--VCLCVCVSELFDSSWVLSVMNLSGFWVVFLLLQLTSFLPFFPSYINASSASDMAVNHHHVNPNGCSSDMPLNRKLKFQ
        MDDPLPTFLPLTLLAQQGVC  VC+CVCVSELFDSSWVLSVMNLSGFWV+F LLQLTSF+P FP+YINASSASDMAVNHHHVNPNGC SDMP NRKLKF 
Subjt:  MDDPLPTFLPLTLLAQQGVC--VCLCVCVSELFDSSWVLSVMNLSGFWVVFLLLQLTSFLPFFPSYINASSASDMAVNHHHVNPNGCSSDMPLNRKLKFQ

Query:  AADEHNKKKGHPSDVNLDDYHPIDPVPSSKTSVKPGPIEHGVPLLPHMPNPPPPAEPGDYA
        AADEHNKKKGHPSDVNLDDYHPIDPVPSSKTSVKPGPIEHGVPLLPHMPNPPPPAEPGDYA
Subjt:  AADEHNKKKGHPSDVNLDDYHPIDPVPSSKTSVKPGPIEHGVPLLPHMPNPPPPAEPGDYA

TrEMBL top hitse value%identityAlignment
A0A0A0L2J3 Uncharacterized protein1.6e-4374.59Show/hide
Query:  MNLSGFWVVFLLLQLTSFLPFFPSYINASSASDMAVNHHHVNPNGCSSDMPLNRKLKFQAAD--EHNKKKGHPSDVNLDDYHPIDPVPSSKTSVKPGPIE
        M LSGFWV F +LQ T  L FFPSYINASS+SD+A+NHHHVN N C SD+ LNRKLKFQ  +   H +KK HP D+NLDDYHPIDPVPSSKTSVKPGPIE
Subjt:  MNLSGFWVVFLLLQLTSFLPFFPSYINASSASDMAVNHHHVNPNGCSSDMPLNRKLKFQAAD--EHNKKKGHPSDVNLDDYHPIDPVPSSKTSVKPGPIE

Query:  HGVPLLPHMPNPPPPAEPGDYA
        HG PLLPHMPNPPPP++PG YA
Subjt:  HGVPLLPHMPNPPPPAEPGDYA

A0A6J1FLR4 uncharacterized protein LOC111446569 isoform X13.3e-86100Show/hide
Query:  MDDPLPTFLPLTLLAQQGVCVCLCVCVSELFDSSWVLSVMNLSGFWVVFLLLQLTSFLPFFPSYINASSASDMAVNHHHVNPNGCSSDMPLNRKLKFQAA
        MDDPLPTFLPLTLLAQQGVCVCLCVCVSELFDSSWVLSVMNLSGFWVVFLLLQLTSFLPFFPSYINASSASDMAVNHHHVNPNGCSSDMPLNRKLKFQAA
Subjt:  MDDPLPTFLPLTLLAQQGVCVCLCVCVSELFDSSWVLSVMNLSGFWVVFLLLQLTSFLPFFPSYINASSASDMAVNHHHVNPNGCSSDMPLNRKLKFQAA

Query:  DEHNKKKGHPSDVNLDDYHPIDPVPSSKTSVKPGPIEHGVPLLPHMPNPPPPAEPGDYA
        DEHNKKKGHPSDVNLDDYHPIDPVPSSKTSVKPGPIEHGVPLLPHMPNPPPPAEPGDYA
Subjt:  DEHNKKKGHPSDVNLDDYHPIDPVPSSKTSVKPGPIEHGVPLLPHMPNPPPPAEPGDYA

A0A6J1FRF9 uncharacterized protein LOC111446569 isoform X22.6e-8398.74Show/hide
Query:  MDDPLPTFLPLTLLAQQGVCVCLCVCVSELFDSSWVLSVMNLSGFWVVFLLLQLTSFLPFFPSYINASSASDMAVNHHHVNPNGCSSDMPLNRKLKFQAA
        MDDPLPTFLPLTLLAQQGVCVCLCVCVSELFDSSWVLSVMNLSGFWVVFLLLQLTSFLPFFPSYINASSASDMAVNHHHVNPNGCSSDMPLNRKLK  AA
Subjt:  MDDPLPTFLPLTLLAQQGVCVCLCVCVSELFDSSWVLSVMNLSGFWVVFLLLQLTSFLPFFPSYINASSASDMAVNHHHVNPNGCSSDMPLNRKLKFQAA

Query:  DEHNKKKGHPSDVNLDDYHPIDPVPSSKTSVKPGPIEHGVPLLPHMPNPPPPAEPGDYA
        DEHNKKKGHPSDVNLDDYHPIDPVPSSKTSVKPGPIEHGVPLLPHMPNPPPPAEPGDYA
Subjt:  DEHNKKKGHPSDVNLDDYHPIDPVPSSKTSVKPGPIEHGVPLLPHMPNPPPPAEPGDYA

A0A6J1J3D1 uncharacterized protein LOC111480979 isoform X23.2e-6581.76Show/hide
Query:  MDDPLPTFLPLTLLAQQGVCVCLCVCVSELFDSSWVLSVMNLSGFWVVFLLLQLTSFLPFFPSYINASSASDMAVNHHHVNPNGCSSDMPLNRKLKFQAA
        MDDP     P       G   C+CVCVSELFDSSWVLSVMNLSGFW V LLLQLTSFLP FP+YINASSAS+MAVNHHHVNPNGC SDMPLNRKLK  AA
Subjt:  MDDPLPTFLPLTLLAQQGVCVCLCVCVSELFDSSWVLSVMNLSGFWVVFLLLQLTSFLPFFPSYINASSASDMAVNHHHVNPNGCSSDMPLNRKLKFQAA

Query:  DEHNKKKGHPSDVNLDDYHPIDPVPSSKTSVKPGPIEHGVPLLPHMPNPPPPAEPGDYA
        DEHNKKK HPS VNLDDYHPIDPVPSSKTS+KPGPIEHG PLLPHMPNPPPPA+PGDYA
Subjt:  DEHNKKKGHPSDVNLDDYHPIDPVPSSKTSVKPGPIEHGVPLLPHMPNPPPPAEPGDYA

A0A6J1J3M3 uncharacterized protein LOC111480979 isoform X14.1e-6883.02Show/hide
Query:  MDDPLPTFLPLTLLAQQGVCVCLCVCVSELFDSSWVLSVMNLSGFWVVFLLLQLTSFLPFFPSYINASSASDMAVNHHHVNPNGCSSDMPLNRKLKFQAA
        MDDP     P       G   C+CVCVSELFDSSWVLSVMNLSGFW V LLLQLTSFLP FP+YINASSAS+MAVNHHHVNPNGC SDMPLNRKLKFQAA
Subjt:  MDDPLPTFLPLTLLAQQGVCVCLCVCVSELFDSSWVLSVMNLSGFWVVFLLLQLTSFLPFFPSYINASSASDMAVNHHHVNPNGCSSDMPLNRKLKFQAA

Query:  DEHNKKKGHPSDVNLDDYHPIDPVPSSKTSVKPGPIEHGVPLLPHMPNPPPPAEPGDYA
        DEHNKKK HPS VNLDDYHPIDPVPSSKTS+KPGPIEHG PLLPHMPNPPPPA+PGDYA
Subjt:  DEHNKKKGHPSDVNLDDYHPIDPVPSSKTSVKPGPIEHGVPLLPHMPNPPPPAEPGDYA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G01075.1 Glycosyl hydrolase family 35 protein2.7e-0859.52Show/hide
Query:  VNLDDYH-PIDPVPSSKTSVKPGPIEHGVPLLPHMPNPPPPA
        V L+DY+ P+DP P++K S+KPGPIEHG PL P++P PP P+
Subjt:  VNLDDYH-PIDPVPSSKTSVKPGPIEHGVPLLPHMPNPPPPA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGACCCCCTTCCAACATTTCTCCCGCTAACACTCCTTGCACAACAGGGTGTGTGTGTGTGTCTGTGTGTGTGTGTTTCGGAGCTCTTCGATTCATCCTGGGTCTT
GTCCGTTATGAATCTTTCTGGGTTCTGGGTTGTGTTTTTGCTGCTCCAATTAACTTCATTCTTGCCTTTCTTTCCCAGCTATATAAATGCCTCCTCCGCCTCCGATATGG
CTGTGAACCACCACCATGTTAACCCAAATGGATGCTCGTCCGACATGCCATTAAACAGGAAGCTGAAGTTCCAGGCTGCTGATGAACATAACAAAAAGAAGGGTCACCCA
AGTGATGTAAATCTCGATGACTACCATCCCATTGATCCTGTTCCAAGTTCAAAGACATCGGTAAAACCTGGGCCCATAGAGCACGGCGTTCCTCTCCTTCCTCATATGCC
AAATCCTCCTCCTCCCGCTGAGCCGGGCGATTATGCTTAG
mRNA sequenceShow/hide mRNA sequence
TCCTCCACAGCCGGAACCCAATGCAGATGATATGGTGATAAAACAAAACATTTAAGTTCTCCTCTTTTCTTTTTCTTTTATTGTTCCTCTTCTGTTCCAATTAAATGCCA
TTCCATATTTCCACCCTCGTTTTAAAGCCCTCATGAGTACTCATGGACGACCCCCTTCCAACATTTCTCCCGCTAACACTCCTTGCACAACAGGGTGTGTGTGTGTGTCT
GTGTGTGTGTGTTTCGGAGCTCTTCGATTCATCCTGGGTCTTGTCCGTTATGAATCTTTCTGGGTTCTGGGTTGTGTTTTTGCTGCTCCAATTAACTTCATTCTTGCCTT
TCTTTCCCAGCTATATAAATGCCTCCTCCGCCTCCGATATGGCTGTGAACCACCACCATGTTAACCCAAATGGATGCTCGTCCGACATGCCATTAAACAGGAAGCTGAAG
TTCCAGGCTGCTGATGAACATAACAAAAAGAAGGGTCACCCAAGTGATGTAAATCTCGATGACTACCATCCCATTGATCCTGTTCCAAGTTCAAAGACATCGGTAAAACC
TGGGCCCATAGAGCACGGCGTTCCTCTCCTTCCTCATATGCCAAATCCTCCTCCTCCCGCTGAGCCGGGCGATTATGCTTAGACAGCTCAAACACATTTATCGTCTCTAC
TGATTGTCTGTCTTGAATAATCCATGTTTGTTTCTCATGGTGCTGTCTTAATAAGTTGTCTGGAGCGTCGTTGTCCAGACGATGTACTAGAATGTTAG
Protein sequenceShow/hide protein sequence
MDDPLPTFLPLTLLAQQGVCVCLCVCVSELFDSSWVLSVMNLSGFWVVFLLLQLTSFLPFFPSYINASSASDMAVNHHHVNPNGCSSDMPLNRKLKFQAADEHNKKKGHP
SDVNLDDYHPIDPVPSSKTSVKPGPIEHGVPLLPHMPNPPPPAEPGDYA