| GenBank top hits | e value | %identity | Alignment |
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| KAG6608449.1 Protein DCL-like, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] | 7.1e-109 | 97.96 | Show/hide |
Query: MVASLLLRGHPLIRLGLRNRGLCAGIVQVTRRSCCTAVPASTPPGGGLSSAENTTSVLSATDPPKYQRWNEPGYRKWKNQEEEILSDIDPIISLTKEILH
MVASLLLRGHPLIRLGLRNRGLC GIVQVTRRSCCTA+PASTPPGGGLSSAENTTSVLSATDPPKYQRW+EPGYRKWKNQEEEILSDIDP+ISLTKEILH
Subjt: MVASLLLRGHPLIRLGLRNRGLCAGIVQVTRRSCCTAVPASTPPGGGLSSAENTTSVLSATDPPKYQRWNEPGYRKWKNQEEEILSDIDPIISLTKEILH
Query: SNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYAERFIREHFKRGS
SNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYAERFIREHFKRGS
Subjt: SNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYAERFIREHFKRGS
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| KAG7037785.1 Protein DCL-like, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma] | 1.3e-107 | 97.94 | Show/hide |
Query: MVASLLLRGHPLIRLGLRNRGLCAGIVQVTRRSCCTAVPASTPPGGGLSSAENTTSVLSATDPPKYQRWNEPGYRKWKNQEEEILSDIDPIISLTKEILH
MVASLLLRGHPLIRLGLRNRGLC GIVQVTRRSCCTA+PASTPPGGGLSSAENTTSVLSATDPPKYQRW+EPGYRKWKNQEEEILSDIDP+ISLTKEILH
Subjt: MVASLLLRGHPLIRLGLRNRGLCAGIVQVTRRSCCTAVPASTPPGGGLSSAENTTSVLSATDPPKYQRWNEPGYRKWKNQEEEILSDIDPIISLTKEILH
Query: SNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYAERFIREHFKR
SNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYAERFIREHFKR
Subjt: SNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYAERFIREHFKR
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| XP_022940238.1 protein DCL homolog, chloroplastic-like [Cucurbita moschata] | 2.2e-110 | 100 | Show/hide |
Query: MVASLLLRGHPLIRLGLRNRGLCAGIVQVTRRSCCTAVPASTPPGGGLSSAENTTSVLSATDPPKYQRWNEPGYRKWKNQEEEILSDIDPIISLTKEILH
MVASLLLRGHPLIRLGLRNRGLCAGIVQVTRRSCCTAVPASTPPGGGLSSAENTTSVLSATDPPKYQRWNEPGYRKWKNQEEEILSDIDPIISLTKEILH
Subjt: MVASLLLRGHPLIRLGLRNRGLCAGIVQVTRRSCCTAVPASTPPGGGLSSAENTTSVLSATDPPKYQRWNEPGYRKWKNQEEEILSDIDPIISLTKEILH
Query: SNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYAERFIREHFKRGS
SNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYAERFIREHFKRGS
Subjt: SNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYAERFIREHFKRGS
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| XP_022982288.1 protein DCL homolog, chloroplastic-like isoform X1 [Cucurbita maxima] | 7.8e-108 | 96.94 | Show/hide |
Query: MVASLLLRGHPLIRLGLRNRGLCAGIVQVTRRSCCTAVPASTPPGGGLSSAENTTSVLSATDPPKYQRWNEPGYRKWKNQEEEILSDIDPIISLTKEILH
MVASLLLRGHPLIRLGLRNRGLC GI+QVTRRSCCTA+PASTPPGGGLSSAENTTSVLS TDPPKYQRW+EPGYRKWKNQEEEILSDIDPIISLTKEILH
Subjt: MVASLLLRGHPLIRLGLRNRGLCAGIVQVTRRSCCTAVPASTPPGGGLSSAENTTSVLSATDPPKYQRWNEPGYRKWKNQEEEILSDIDPIISLTKEILH
Query: SNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYAERFIREHFKRGS
SNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYA+RFIREHFKRGS
Subjt: SNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYAERFIREHFKRGS
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| XP_023523235.1 protein DCL homolog, chloroplastic-like [Cucurbita pepo subsp. pepo] | 3.0e-107 | 95.41 | Show/hide |
Query: MVASLLLRGHPLIRLGLRNRGLCAGIVQVTRRSCCTAVPASTPPGGGLSSAENTTSVLSATDPPKYQRWNEPGYRKWKNQEEEILSDIDPIISLTKEILH
MVASLLLRGHPLIRLGLRNRGLC G+V+VTRRSCCTA+PASTPPGGGLSSAENTTSVLSATDPP YQRW+EPGYRKWKNQEEEILSDIDP+ISLTKEILH
Subjt: MVASLLLRGHPLIRLGLRNRGLCAGIVQVTRRSCCTAVPASTPPGGGLSSAENTTSVLSATDPPKYQRWNEPGYRKWKNQEEEILSDIDPIISLTKEILH
Query: SNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYAERFIREHFKRGS
SNRYVDGERLTFEDEKI+VDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFV+RTDGGWIDFSYQKCLRAYIRNKYPLYAERFIREHFKRGS
Subjt: SNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYAERFIREHFKRGS
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A1S3BU88 protein DCL, chloroplastic | 1.4e-91 | 81.12 | Show/hide |
Query: MVASLLLRGHPLIRLGLRNRGLCAGIVQVTRRSCCTAVPASTPPGGGLSSAENTTSVLSATDPPKYQRWNEPGYRKWKNQEEEILSDIDPIISLTKEILH
M AS L RGHPL+RLGL+ RGLC G+VQVTRRSCC+A ASTP G L++ +N TS++S+++PPKYQRW+EP YRKWKNQEEEIL DI+PII LTKEILH
Subjt: MVASLLLRGHPLIRLGLRNRGLCAGIVQVTRRSCCTAVPASTPPGGGLSSAENTTSVLSATDPPKYQRWNEPGYRKWKNQEEEILSDIDPIISLTKEILH
Query: SNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYAERFIREHFKRGS
S+RY DGERLT EDE+ VVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRC FVIRTDGGWIDFSYQKCLRAYIRNKYP +AERFIREHFKRGS
Subjt: SNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYAERFIREHFKRGS
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| A0A6J1C4J4 protein DCL, chloroplastic isoform X1 | 1.5e-96 | 87.24 | Show/hide |
Query: MVASLLLRGHPLIRLGLRNRGLCAGIVQVTRRSCCTAVPASTPPGGGLSSAENTTSVLSATDPPKYQRWNEPGYRKWKNQEEEILSDIDPIISLTKEILH
M ASLLLRGHPL+RLGLR+RGLC GIVQVTRRSCCTA A TPP G L+SAEN TSVLS++DPPKY RW+EP YRKWK+QEEE+L+DI+PIISLTKEILH
Subjt: MVASLLLRGHPLIRLGLRNRGLCAGIVQVTRRSCCTAVPASTPPGGGLSSAENTTSVLSATDPPKYQRWNEPGYRKWKNQEEEILSDIDPIISLTKEILH
Query: SNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYAERFIREHFKRGS
SNRYVDGERLT DE+IVV+RLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYP YAERFIREHFKRGS
Subjt: SNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYAERFIREHFKRGS
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| A0A6J1FNQ4 protein DCL homolog, chloroplastic-like | 1.1e-110 | 100 | Show/hide |
Query: MVASLLLRGHPLIRLGLRNRGLCAGIVQVTRRSCCTAVPASTPPGGGLSSAENTTSVLSATDPPKYQRWNEPGYRKWKNQEEEILSDIDPIISLTKEILH
MVASLLLRGHPLIRLGLRNRGLCAGIVQVTRRSCCTAVPASTPPGGGLSSAENTTSVLSATDPPKYQRWNEPGYRKWKNQEEEILSDIDPIISLTKEILH
Subjt: MVASLLLRGHPLIRLGLRNRGLCAGIVQVTRRSCCTAVPASTPPGGGLSSAENTTSVLSATDPPKYQRWNEPGYRKWKNQEEEILSDIDPIISLTKEILH
Query: SNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYAERFIREHFKRGS
SNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYAERFIREHFKRGS
Subjt: SNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYAERFIREHFKRGS
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| A0A6J1IHJ1 protein DCL homolog, chloroplastic-like | 1.9e-91 | 82.65 | Show/hide |
Query: MVASLLLRGHPLIRLGLRNRGLCAGIVQVTRRSCCTAVPASTPPGGGLSSAENTTSVLSATDPPKYQRWNEPGYRKWKNQEEEILSDIDPIISLTKEILH
M ASLLLRGHPL+R GL +RGLC+G+VQVTRRSCCTA ASTPP G L+SAENT SV SA+ KYQRW EP YRKWK+QE+EILSD++P++SLTKEILH
Subjt: MVASLLLRGHPLIRLGLRNRGLCAGIVQVTRRSCCTAVPASTPPGGGLSSAENTTSVLSATDPPKYQRWNEPGYRKWKNQEEEILSDIDPIISLTKEILH
Query: SNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYAERFIREHFKRGS
SNRYVDGERLT EDE+IVVDRLLAHHPHAEDKIGCGLE IMVDRHPQFR+SRCLFV+RTDGGWIDFSYQKCLRAYIR+KYP YAE FIREHFKRGS
Subjt: SNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYAERFIREHFKRGS
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| A0A6J1J4G4 protein DCL homolog, chloroplastic-like isoform X1 | 3.8e-108 | 96.94 | Show/hide |
Query: MVASLLLRGHPLIRLGLRNRGLCAGIVQVTRRSCCTAVPASTPPGGGLSSAENTTSVLSATDPPKYQRWNEPGYRKWKNQEEEILSDIDPIISLTKEILH
MVASLLLRGHPLIRLGLRNRGLC GI+QVTRRSCCTA+PASTPPGGGLSSAENTTSVLS TDPPKYQRW+EPGYRKWKNQEEEILSDIDPIISLTKEILH
Subjt: MVASLLLRGHPLIRLGLRNRGLCAGIVQVTRRSCCTAVPASTPPGGGLSSAENTTSVLSATDPPKYQRWNEPGYRKWKNQEEEILSDIDPIISLTKEILH
Query: SNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYAERFIREHFKRGS
SNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYA+RFIREHFKRGS
Subjt: SNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYAERFIREHFKRGS
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| Q42463 Protein DCL, chloroplastic | 1.3e-28 | 44.92 | Show/hide |
Query: WKNQEEEILSDIDPIISLTKEILHSNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYI
W + E++IL D P++ + ILHS +Y G+RL+ + ++ ++ RLL +HP + KIG G++ I V HP F +SRCLF++R DG +DFSY KC++ I
Subjt: WKNQEEEILSDIDPIISLTKEILHSNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYI
Query: RNKYPLYAERFIREHFKR
R YPLYA+ FI HF++
Subjt: RNKYPLYAERFIREHFKR
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| Q5D869 DNA-directed RNA polymerase V subunit 1 | 3.3e-24 | 41.38 | Show/hide |
Query: NQEEEILSDIDPIISLTKEILHSNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRN
++E+E+LSD++P++ ++I+H + Y DG+ ++ +D+ V++++L HP E K+G G++ I VD+H F SRC FV+ TDG DFSY+K L Y+
Subjt: NQEEEILSDIDPIISLTKEILHSNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRN
Query: KYPLYAERFIREHFKR
KYP AE FI ++F +
Subjt: KYPLYAERFIREHFKR
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| Q9C642 Protein DCL homolog, chloroplastic | 4.4e-29 | 46.49 | Show/hide |
Query: EEEILSDIDPIISLTKEILHSNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKY
E++IL P++ + ILHS +Y + +RL+ E E+ +++ LL +HP E KIGCG++ IMV HP F SRC+F++R DG +DFSY KC++ I+ KY
Subjt: EEEILSDIDPIISLTKEILHSNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKY
Query: PLYAERFIREHFKR
PLYA+ FI HF++
Subjt: PLYAERFIREHFKR
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| Q9LQ02 DNA-directed RNA polymerase IV subunit 1 | 5.2e-06 | 32.5 | Show/hide |
Query: WKNQEEEILSDIDPIISLTKEILHSNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYI
WKN I+ + K ILHS Y E L DE + V +L HP++ +KIG G++ I V + + S C V+R DG + DFSY KC+
Subjt: WKNQEEEILSDIDPIISLTKEILHSNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYI
Query: RNKYPLYAERFIREHFKRGS
+ P + ++ K G+
Subjt: RNKYPLYAERFIREHFKRGS
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G45230.1 Protein of unknown function (DUF3223) | 3.1e-30 | 46.49 | Show/hide |
Query: EEEILSDIDPIISLTKEILHSNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKY
E++IL P++ + ILHS +Y + +RL+ E E+ +++ LL +HP E KIGCG++ IMV HP F SRC+F++R DG +DFSY KC++ I+ KY
Subjt: EEEILSDIDPIISLTKEILHSNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKY
Query: PLYAERFIREHFKR
PLYA+ FI HF++
Subjt: PLYAERFIREHFKR
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| AT1G45230.2 Protein of unknown function (DUF3223) | 7.0e-30 | 46.49 | Show/hide |
Query: EEEILSDIDPIISLTKEILHSNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKY
E++IL P++ + ILHS +Y + +RL+ E E+ +++ LL +HP E KIGCG++ IMV HP F SRC+F++R DG +DFSY KC++ I+ KY
Subjt: EEEILSDIDPIISLTKEILHSNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKY
Query: PLYAERFIREHFKR
PLYA+ FI HF++
Subjt: PLYAERFIREHFKR
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| AT1G63020.1 nuclear RNA polymerase D1A | 3.7e-07 | 32.5 | Show/hide |
Query: WKNQEEEILSDIDPIISLTKEILHSNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYI
WKN I+ + K ILHS Y E L DE + V +L HP++ +KIG G++ I V + + S C V+R DG + DFSY KC+
Subjt: WKNQEEEILSDIDPIISLTKEILHSNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYI
Query: RNKYPLYAERFIREHFKRGS
+ P + ++ K G+
Subjt: RNKYPLYAERFIREHFKRGS
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| AT2G40030.1 nuclear RNA polymerase D1B | 2.3e-25 | 41.38 | Show/hide |
Query: NQEEEILSDIDPIISLTKEILHSNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRN
++E+E+LSD++P++ ++I+H + Y DG+ ++ +D+ V++++L HP E K+G G++ I VD+H F SRC FV+ TDG DFSY+K L Y+
Subjt: NQEEEILSDIDPIISLTKEILHSNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRN
Query: KYPLYAERFIREHFKR
KYP AE FI ++F +
Subjt: KYPLYAERFIREHFKR
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| AT3G46630.1 Protein of unknown function (DUF3223) | 4.5e-61 | 58.74 | Show/hide |
Query: MVASLLLRGHPLIRLGLRNR----GLCA-GIVQVTRRSCCTAV--PASTPPGGGLSSAENT-TSVLSATDPPKYQRW--NEPGYRKWKNQEEEILSDIDP
M + LLLR PL+R G N G+ A GI+ RR C+ P +S E + + ++ T P W +P YRKWKN E EIL DI+P
Subjt: MVASLLLRGHPLIRLGLRNR----GLCA-GIVQVTRRSCCTAV--PASTPPGGGLSSAENT-TSVLSATDPPKYQRW--NEPGYRKWKNQEEEILSDIDP
Query: IISLTKEILHSNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYAERFIRE
I L KEILHS+RY+DGERL FEDEKIV+++LL +HP+++DKIGCGL+ IMVDRHPQFRHSRCLFV+RTDGGWIDFSYQKCLRAY+R+KYP +AERFIRE
Subjt: IISLTKEILHSNRYVDGERLTFEDEKIVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCLFVIRTDGGWIDFSYQKCLRAYIRNKYPLYAERFIRE
Query: HFKRGS
HFKR S
Subjt: HFKRGS
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