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CmoCh01G019050 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G019050
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCalcium-binding EF-hand
Genome locationCmo_Chr01:13696731..13697015
RNA-Seq ExpressionCmoCh01G019050
SyntenyCmoCh01G019050
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064377.1 Calcium-binding EF-hand [Cucumis melo var. makuwa]7.7e-3782.42Show/hide
Query:  FRSGICDYKRCPVPFTKEQLREIFLRHDNDGDGRLSRLELKAAFESLGSNWSRFRARQCLKAADSNGDGYVTLDELDGLLDYAVRCEYAII
        F +G+ DYKRCPVPF+++QLR+IFL+HD DGDGRLSRLELK+AF+SLGSNWSRFRARQ LKAAD++GDGYVTLDELDGLLDYAVR EYAII
Subjt:  FRSGICDYKRCPVPFTKEQLREIFLRHDNDGDGRLSRLELKAAFESLGSNWSRFRARQCLKAADSNGDGYVTLDELDGLLDYAVRCEYAII

KAF3961271.1 hypothetical protein CMV_014096 [Castanea mollissima]6.1e-1855.42Show/hide
Query:  YKRCPVPFTKEQLREIFLRHDNDGDGRLSRLELKAAFESLGSNWSRFRARQCLKAADSNGDGYVTLDELDGLLDYAVRCEYAI
        +KR  VPFT++QL  IF  HD DGDG+LSR ELK AF+ LGS W  +R  Q L+ AD+N DGY+T DEL  L++YA+ C Y +
Subjt:  YKRCPVPFTKEQLREIFLRHDNDGDGRLSRLELKAAFESLGSNWSRFRARQCLKAADSNGDGYVTLDELDGLLDYAVRCEYAI

KAG6591371.1 putative calcium-binding protein CML10, partial [Cucurbita argyrosperma subsp. sororia]2.4e-3884.62Show/hide
Query:  FRSGICDYKRCPVPFTKEQLREIFLRHDNDGDGRLSRLELKAAFESLGSNWSRFRARQCLKAADSNGDGYVTLDELDGLLDYAVRCEYAII
        FR+G+ DYKRCPVPF++EQLR+IFL+HD DGDGRLSRLELK+AF+SLGSNWSRFRARQ LKAADS+GDGYVTLDELD LLDY+VRCEYAII
Subjt:  FRSGICDYKRCPVPFTKEQLREIFLRHDNDGDGRLSRLELKAAFESLGSNWSRFRARQCLKAADSNGDGYVTLDELDGLLDYAVRCEYAII

KAG6608480.1 putative calcium-binding protein CML10, partial [Cucurbita argyrosperma subsp. sororia]7.4e-48100Show/hide
Query:  MGFFRSGICDYKRCPVPFTKEQLREIFLRHDNDGDGRLSRLELKAAFESLGSNWSRFRARQCLKAADSNGDGYVTLDELDGLLDYAVRCEYAII
        MGFFRSGICDYKRCPVPFTKEQLREIFLRHDNDGDGRLSRLELKAAFESLGSNWSRFRARQCLKAADSNGDGYVTLDELDGLLDYAVRCEYAII
Subjt:  MGFFRSGICDYKRCPVPFTKEQLREIFLRHDNDGDGRLSRLELKAAFESLGSNWSRFRARQCLKAADSNGDGYVTLDELDGLLDYAVRCEYAII

KGN55186.1 hypothetical protein Csa_012423 [Cucumis sativus]1.2e-3783.52Show/hide
Query:  FRSGICDYKRCPVPFTKEQLREIFLRHDNDGDGRLSRLELKAAFESLGSNWSRFRARQCLKAADSNGDGYVTLDELDGLLDYAVRCEYAII
        F +G+ DYKRCPVPF+++QLR+IFL+HD DGDGRLSRLELK+AFESLGSNWSRFRARQ LKAAD++GDGYVTLDELD LLDYAVRCEYAII
Subjt:  FRSGICDYKRCPVPFTKEQLREIFLRHDNDGDGRLSRLELKAAFESLGSNWSRFRARQCLKAADSNGDGYVTLDELDGLLDYAVRCEYAII

TrEMBL top hitse value%identityAlignment
A0A0A0L4V0 Uncharacterized protein5.8e-3883.52Show/hide
Query:  FRSGICDYKRCPVPFTKEQLREIFLRHDNDGDGRLSRLELKAAFESLGSNWSRFRARQCLKAADSNGDGYVTLDELDGLLDYAVRCEYAII
        F +G+ DYKRCPVPF+++QLR+IFL+HD DGDGRLSRLELK+AFESLGSNWSRFRARQ LKAAD++GDGYVTLDELD LLDYAVRCEYAII
Subjt:  FRSGICDYKRCPVPFTKEQLREIFLRHDNDGDGRLSRLELKAAFESLGSNWSRFRARQCLKAADSNGDGYVTLDELDGLLDYAVRCEYAII

A0A2P6Q0G3 Putative EF-hand domain pair protein5.6e-1753.66Show/hide
Query:  KRCPVPFTKEQLREIFLRHDNDGDGRLSRLELKAAFESLGSNWSRFRARQCLKAADSNGDGYVTLDELDGLLDYAVRCEYAI
        K  P+P++KEQ+RE+F   D DGDG+LS+ ELKAAF  LGS WS FRAR+ L+  DSN DG ++ +E + L++YA+ C Y I
Subjt:  KRCPVPFTKEQLREIFLRHDNDGDGRLSRLELKAAFESLGSNWSRFRARQCLKAADSNGDGYVTLDELDGLLDYAVRCEYAI

A0A5A7V5B0 Putative Calcium-binding EF-hand family protein7.3e-1753.01Show/hide
Query:  YKRCPVPFTKEQLREIFLRHDNDGDGRLSRLELKAAFESLGSNWSRFRARQCLKAADSNGDGYVTLDELDGLLDYAVRCEYAI
        YKR  VPF++EQL  +F  HD DGDG L++ ELK AFE LGS +S FR  + L+AAD+NGDG +++DE+  L+ YA   +Y I
Subjt:  YKRCPVPFTKEQLREIFLRHDNDGDGRLSRLELKAAFESLGSNWSRFRARQCLKAADSNGDGYVTLDELDGLLDYAVRCEYAI

A0A5A7VBH2 Calcium-binding EF-hand3.7e-3782.42Show/hide
Query:  FRSGICDYKRCPVPFTKEQLREIFLRHDNDGDGRLSRLELKAAFESLGSNWSRFRARQCLKAADSNGDGYVTLDELDGLLDYAVRCEYAII
        F +G+ DYKRCPVPF+++QLR+IFL+HD DGDGRLSRLELK+AF+SLGSNWSRFRARQ LKAAD++GDGYVTLDELDGLLDYAVR EYAII
Subjt:  FRSGICDYKRCPVPFTKEQLREIFLRHDNDGDGRLSRLELKAAFESLGSNWSRFRARQCLKAADSNGDGYVTLDELDGLLDYAVRCEYAII

A0A7N2KRS3 Uncharacterized protein2.5e-1754.22Show/hide
Query:  YKRCPVPFTKEQLREIFLRHDNDGDGRLSRLELKAAFESLGSNWSRFRARQCLKAADSNGDGYVTLDELDGLLDYAVRCEYAI
        +KR  VPF ++QL  IF  HD DGDG+LSR ELK AF+ LGS W  +R  Q L+ AD+N DGY+T DEL  L++YA+ C Y +
Subjt:  YKRCPVPFTKEQLREIFLRHDNDGDGRLSRLELKAAFESLGSNWSRFRARQCLKAADSNGDGYVTLDELDGLLDYAVRCEYAI

SwissProt top hitse value%identityAlignment
Q6L4D4 Probable calcium-binding protein CML151.1e-0638.71Show/hide
Query:  PFTKEQLREIFLRHDNDGDGRLSRLELKAAFESLGSNWSRFRARQCLKAADSNGDGYVTLDE
        P  +++   +F + D +GDGR+SR EL A F S+G   +     + ++ ADS+GDGY++L E
Subjt:  PFTKEQLREIFLRHDNDGDGRLSRLELKAAFESLGSNWSRFRARQCLKAADSNGDGYVTLDE

Q8L3R2 Probable calcium-binding protein CML413.3e-0635.38Show/hide
Query:  TKEQLREIFLRHDNDGDGRLSRLELKAAFESLGSNWSRFRARQCLKAADSNGDGYVTLDELDGLL
        +KE+LR++F   D+DGDG++S  EL+  F S+G   S   A++ +   D++ DG +  ++  GL+
Subjt:  TKEQLREIFLRHDNDGDGRLSRLELKAAFESLGSNWSRFRARQCLKAADSNGDGYVTLDELDGLL

Q8RZB5 Probable calcium-binding protein CML109.2e-0941.18Show/hide
Query:  PVPFTKEQLREIFLRHDNDGDGRLSRLELKAAFESLGSNWSRFRARQCLKAADSNGDGYVTLDELDGL
        P P  +E++  +F + D +GDGR+SR EL A FESLG   +     + +  AD++GDG+++LDE   L
Subjt:  PVPFTKEQLREIFLRHDNDGDGRLSRLELKAAFESLGSNWSRFRARQCLKAADSNGDGYVTLDELDGL

Q9FZ75 Probable calcium-binding protein CML155.6e-0646.77Show/hide
Query:  QLREIFLRHDNDGDGRLSRLELKAAFESLGSNWSRFRARQCLKAADSNGDGYVTLDELDGLL
        QL++IF R D D DG L+ LEL A   SLG   S  +    L + DSNG+G+V  DEL G +
Subjt:  QLREIFLRHDNDGDGRLSRLELKAAFESLGSNWSRFRARQCLKAADSNGDGYVTLDELDGLL

Q9LE22 Probable calcium-binding protein CML278.6e-0735.48Show/hide
Query:  EQLREIFLRHDNDGDGRLSRLELKAAFESLGSNWSRFRARQCLKAADSNGDGYVTLDELDGL
        E+L+++F + D++GDG++S LEL   F+++G++++     + L+  D++ DGY+ LDE   L
Subjt:  EQLREIFLRHDNDGDGRLSRLELKAAFESLGSNWSRFRARQCLKAADSNGDGYVTLDELDGL

Arabidopsis top hitse value%identityAlignment
AT1G18210.1 Calcium-binding EF-hand family protein6.1e-0835.48Show/hide
Query:  EQLREIFLRHDNDGDGRLSRLELKAAFESLGSNWSRFRARQCLKAADSNGDGYVTLDELDGL
        E+L+++F + D++GDG++S LEL   F+++G++++     + L+  D++ DGY+ LDE   L
Subjt:  EQLREIFLRHDNDGDGRLSRLELKAAFESLGSNWSRFRARQCLKAADSNGDGYVTLDELDGL

AT1G18210.2 Calcium-binding EF-hand family protein6.1e-0835.48Show/hide
Query:  EQLREIFLRHDNDGDGRLSRLELKAAFESLGSNWSRFRARQCLKAADSNGDGYVTLDELDGL
        E+L+++F + D++GDG++S LEL   F+++G++++     + L+  D++ DGY+ LDE   L
Subjt:  EQLREIFLRHDNDGDGRLSRLELKAAFESLGSNWSRFRARQCLKAADSNGDGYVTLDELDGL

AT1G18530.1 EF hand calcium-binding protein family4.0e-0746.77Show/hide
Query:  QLREIFLRHDNDGDGRLSRLELKAAFESLGSNWSRFRARQCLKAADSNGDGYVTLDELDGLL
        QL++IF R D D DG L+ LEL A   SLG   S  +    L + DSNG+G+V  DEL G +
Subjt:  QLREIFLRHDNDGDGRLSRLELKAAFESLGSNWSRFRARQCLKAADSNGDGYVTLDELDGLL

AT2G43290.1 Calcium-binding EF-hand family protein2.9e-0536.07Show/hide
Query:  QLREIFLRHDNDGDGRLSRLELKAAFESLGSNWSRFRARQCLKAADSNGDGYVTLDELDGL
        +L+ +F   D +GDGR+++ EL  + E+LG         Q +   D+NGDG V +DE + L
Subjt:  QLREIFLRHDNDGDGRLSRLELKAAFESLGSNWSRFRARQCLKAADSNGDGYVTLDELDGL

AT3G50770.1 calmodulin-like 412.3e-0735.38Show/hide
Query:  TKEQLREIFLRHDNDGDGRLSRLELKAAFESLGSNWSRFRARQCLKAADSNGDGYVTLDELDGLL
        +KE+LR++F   D+DGDG++S  EL+  F S+G   S   A++ +   D++ DG +  ++  GL+
Subjt:  TKEQLREIFLRHDNDGDGRLSRLELKAAFESLGSNWSRFRARQCLKAADSNGDGYVTLDELDGLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTCTTCCGCAGCGGCATCTGCGACTACAAGCGATGTCCAGTTCCTTTCACCAAAGAGCAGCTTCGCGAGATTTTCCTCAGGCACGACAACGACGGCGACGGCCG
ACTCTCCCGCCTGGAACTCAAAGCCGCCTTCGAGTCCTTAGGATCCAATTGGAGCCGTTTCAGAGCTCGCCAGTGTCTCAAAGCCGCCGATTCCAACGGCGATGGCTACG
TTACTCTTGATGAACTGGATGGCCTTCTTGATTACGCTGTAAGATGCGAATACGCTATAATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTTCTTCCGCAGCGGCATCTGCGACTACAAGCGATGTCCAGTTCCTTTCACCAAAGAGCAGCTTCGCGAGATTTTCCTCAGGCACGACAACGACGGCGACGGCCG
ACTCTCCCGCCTGGAACTCAAAGCCGCCTTCGAGTCCTTAGGATCCAATTGGAGCCGTTTCAGAGCTCGCCAGTGTCTCAAAGCCGCCGATTCCAACGGCGATGGCTACG
TTACTCTTGATGAACTGGATGGCCTTCTTGATTACGCTGTAAGATGCGAATACGCTATAATTTGA
Protein sequenceShow/hide protein sequence
MGFFRSGICDYKRCPVPFTKEQLREIFLRHDNDGDGRLSRLELKAAFESLGSNWSRFRARQCLKAADSNGDGYVTLDELDGLLDYAVRCEYAII