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CmoCh01G019130 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G019130
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionIntraflagellar transport protein
Genome locationCmo_Chr01:13723539..13723997
RNA-Seq ExpressionCmoCh01G019130
SyntenyCmoCh01G019130
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608487.1 hypothetical protein SDJN03_01829, partial [Cucurbita argyrosperma subsp. sororia]4.0e-7598.68Show/hide
Query:  MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAFLESPISPTPQDRSSGVSSSTQYDARIADEAYKAGCAALAV
        MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAFLESPISPTPQDRSSG SSSTQYDARIADEAYKAGCAALAV
Subjt:  MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAFLESPISPTPQDRSSGVSSSTQYDARIADEAYKAGCAALAV

Query:  GKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSKQLQIRSSNCHEISED
        GKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTS+QLQIRSSNCHEISED
Subjt:  GKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSKQLQIRSSNCHEISED

KAG7037814.1 hypothetical protein SDJN02_01445, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-6698.54Show/hide
Query:  MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAFLESPISPTPQDRSSGVSSSTQYDARIADEAYKAGCAALAV
        MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAFLESPISPTPQDRSSG SSSTQYDARIADEAYKAGCAALAV
Subjt:  MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAFLESPISPTPQDRSSGVSSSTQYDARIADEAYKAGCAALAV

Query:  GKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSK
        GKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTS+
Subjt:  GKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSK

XP_008452533.1 PREDICTED: uncharacterized protein LOC103493531 [Cucumis melo]1.2e-5274.34Show/hide
Query:  MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAFLESPISPTPQDRSSGVSSSTQYDARIADEAYKAGCAALAV
        M QR+WHK+ +G+E+++S GGI  WNVFDNVKTTTKTPEAL+AEIN AI+NLEY R+ A+LESPIS  P+D     +S +QYD RIAD AYKAGC AL +
Subjt:  MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAFLESPISPTPQDRSSGVSSSTQYDARIADEAYKAGCAALAV

Query:  GKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSKQLQIRSSNCHEISED
        GKLDEALHSLNVSLSKCPPEKSSAVAK+QSLISLTS+Q+QIRSSNC EISED
Subjt:  GKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSKQLQIRSSNCHEISED

XP_022940904.1 uncharacterized protein LOC111446352 [Cucurbita moschata]4.7e-76100Show/hide
Query:  MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAFLESPISPTPQDRSSGVSSSTQYDARIADEAYKAGCAALAV
        MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAFLESPISPTPQDRSSGVSSSTQYDARIADEAYKAGCAALAV
Subjt:  MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAFLESPISPTPQDRSSGVSSSTQYDARIADEAYKAGCAALAV

Query:  GKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSKQLQIRSSNCHEISED
        GKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSKQLQIRSSNCHEISED
Subjt:  GKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSKQLQIRSSNCHEISED

XP_038899466.1 uncharacterized protein LOC120086752 [Benincasa hispida]2.3e-5479.08Show/hide
Query:  MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAFLESPISP-TPQDRSSGVSSSTQYDARIADEAYKAGCAALA
        MPQRDWHKN K  ENM+SG GIAAWNVFDNVKTTTKTPEAL+AEIN AI+N EYAR+TA L+SPISP   +D  S  S  TQY  R+AD +YKAGCAA  
Subjt:  MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAFLESPISP-TPQDRSSGVSSSTQYDARIADEAYKAGCAALA

Query:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSKQLQIRSSNCHEISED
        VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTS QLQIRSSN  EISED
Subjt:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSKQLQIRSSNCHEISED

TrEMBL top hitse value%identityAlignment
A0A0A0L090 Uncharacterized protein6.0e-5375.16Show/hide
Query:  MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAFLESPISP-TPQDRSSGVSSSTQYDARIADEAYKAGCAALA
        MPQR+ HK+ + +E+++S GGIAAWNVFD+VKTTTKTPEAL+ EI  AI+NLEYAR+TA+LESPISP  P+D     +S +QYD R+AD AYKAGC AL 
Subjt:  MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAFLESPISP-TPQDRSSGVSSSTQYDARIADEAYKAGCAALA

Query:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSKQLQIRSSNCHEISED
        VGKLDEALHSLNVSLSKCPPEKSSAVAK+QSLISLTS+QLQIRSSNC EISED
Subjt:  VGKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSKQLQIRSSNCHEISED

A0A1S3BU07 uncharacterized protein LOC1034935316.0e-5374.34Show/hide
Query:  MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAFLESPISPTPQDRSSGVSSSTQYDARIADEAYKAGCAALAV
        M QR+WHK+ +G+E+++S GGI  WNVFDNVKTTTKTPEAL+AEIN AI+NLEY R+ A+LESPIS  P+D     +S +QYD RIAD AYKAGC AL +
Subjt:  MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAFLESPISPTPQDRSSGVSSSTQYDARIADEAYKAGCAALAV

Query:  GKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSKQLQIRSSNCHEISED
        GKLDEALHSLNVSLSKCPPEKSSAVAK+QSLISLTS+Q+QIRSSNC EISED
Subjt:  GKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSKQLQIRSSNCHEISED

A0A5A7VF87 Uncharacterized protein6.0e-5374.34Show/hide
Query:  MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAFLESPISPTPQDRSSGVSSSTQYDARIADEAYKAGCAALAV
        M QR+WHK+ +G+E+++S GGI  WNVFDNVKTTTKTPEAL+AEIN AI+NLEY R+ A+LESPIS  P+D     +S +QYD RIAD AYKAGC AL +
Subjt:  MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAFLESPISPTPQDRSSGVSSSTQYDARIADEAYKAGCAALAV

Query:  GKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSKQLQIRSSNCHEISED
        GKLDEALHSLNVSLSKCPPEKSSAVAK+QSLISLTS+Q+QIRSSNC EISED
Subjt:  GKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSKQLQIRSSNCHEISED

A0A6J1BP49 uncharacterized protein LOC1110261682.1e-5074.34Show/hide
Query:  MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAFLESPISPTPQDRSSGVSSSTQYDARIADEAYKAGCAALAV
        MP RD  KNPK +EN+ S GGI AWN FDNV  TTKTPEAL+AEIN AI+ +EYAR+TA LES   P  QD  SG S   QYDAR+ADEAYKAGCAALAV
Subjt:  MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAFLESPISPTPQDRSSGVSSSTQYDARIADEAYKAGCAALAV

Query:  GKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSKQLQIRSSNCHEISED
        GKLD+ALHSLNVSLSKCPPEK+SAVAKL SLI+LTS+QL  RSSNC EISED
Subjt:  GKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSKQLQIRSSNCHEISED

A0A6J1FLM9 uncharacterized protein LOC1114463522.3e-76100Show/hide
Query:  MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAFLESPISPTPQDRSSGVSSSTQYDARIADEAYKAGCAALAV
        MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAFLESPISPTPQDRSSGVSSSTQYDARIADEAYKAGCAALAV
Subjt:  MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAFLESPISPTPQDRSSGVSSSTQYDARIADEAYKAGCAALAV

Query:  GKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSKQLQIRSSNCHEISED
        GKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSKQLQIRSSNCHEISED
Subjt:  GKLDEALHSLNVSLSKCPPEKSSAVAKLQSLISLTSKQLQIRSSNCHEISED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCAACGAGATTGGCATAAGAATCCGAAAGGAAAAGAGAATATGAGTTCTGGAGGAGGAATCGCCGCTTGGAATGTGTTTGACAATGTGAAGACCACAACGAAGAC
GCCTGAAGCTCTAATCGCGGAGATCAATACTGCAATTGCAAATCTCGAATATGCTCGATCAACCGCCTTCTTAGAATCTCCAATTTCTCCCACTCCACAAGATAGGAGCT
CTGGTGTGAGCTCAAGTACTCAGTATGATGCACGAATTGCAGATGAAGCGTACAAGGCAGGGTGTGCGGCATTGGCTGTTGGTAAACTCGATGAGGCTCTTCATTCGTTG
AATGTCTCTCTTTCGAAATGCCCGCCTGAGAAATCCTCTGCTGTTGCTAAGCTTCAGTCTCTCATCTCTTTGACGTCTAAGCAACTTCAGATCAGATCTTCCAATTGTCA
TGAAATTTCAGAAGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCAACGAGATTGGCATAAGAATCCGAAAGGAAAAGAGAATATGAGTTCTGGAGGAGGAATCGCCGCTTGGAATGTGTTTGACAATGTGAAGACCACAACGAAGAC
GCCTGAAGCTCTAATCGCGGAGATCAATACTGCAATTGCAAATCTCGAATATGCTCGATCAACCGCCTTCTTAGAATCTCCAATTTCTCCCACTCCACAAGATAGGAGCT
CTGGTGTGAGCTCAAGTACTCAGTATGATGCACGAATTGCAGATGAAGCGTACAAGGCAGGGTGTGCGGCATTGGCTGTTGGTAAACTCGATGAGGCTCTTCATTCGTTG
AATGTCTCTCTTTCGAAATGCCCGCCTGAGAAATCCTCTGCTGTTGCTAAGCTTCAGTCTCTCATCTCTTTGACGTCTAAGCAACTTCAGATCAGATCTTCCAATTGTCA
TGAAATTTCAGAAGATTGA
Protein sequenceShow/hide protein sequence
MPQRDWHKNPKGKENMSSGGGIAAWNVFDNVKTTTKTPEALIAEINTAIANLEYARSTAFLESPISPTPQDRSSGVSSSTQYDARIADEAYKAGCAALAVGKLDEALHSL
NVSLSKCPPEKSSAVAKLQSLISLTSKQLQIRSSNCHEISED