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CmoCh01G019180 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G019180
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr01:13738705..13738998
RNA-Seq ExpressionCmoCh01G019180
SyntenyCmoCh01G019180
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064365.1 hypothetical protein E6C27_scaffold255G00660 [Cucumis melo var. makuwa]9.8e-1151.35Show/hide
Query:  INLISAAAAAAVLLVLASIFNNNIPHTQGLRLLPMEQ---------------EHPAV-HLNSRPQSF-HPSPIAATDVDVHGGDFRPTTPGHSPGAGHGL
        I LIS  AA   +L+L+S F  NI HTQ  RLLP+E                E  AV  L S P +F H +  A  DV+V GGDFRPTT GHSPGAGH +
Subjt:  INLISAAAAAAVLLVLASIFNNNIPHTQGLRLLPMEQ---------------EHPAV-HLNSRPQSF-HPSPIAATDVDVHGGDFRPTTPGHSPGAGHGL

Query:  APDSHVDSKIH
        AP SH+DSKIH
Subjt:  APDSHVDSKIH

KAG6591363.1 Precursor of CEP5, partial [Cucurbita argyrosperma subsp. sororia]7.5e-1153.61Show/hide
Query:  LVLASIFNNNIPHTQGLRLLPMEQEHPAV--------------HLNSRPQSFH--PSPIAATDVDVHGGDFRPTTPGHSPGAGHGLAPDSHVDSKIH
        L+L+SI   NI HT G RLLP+  EHP V               L SRP +F    S     D +V GGDFRPTTPGHSPG GH LAP SHVDSKIH
Subjt:  LVLASIFNNNIPHTQGLRLLPMEQEHPAV--------------HLNSRPQSFH--PSPIAATDVDVHGGDFRPTTPGHSPGAGHGLAPDSHVDSKIH

KAG6608491.1 hypothetical protein SDJN03_01833, partial [Cucurbita argyrosperma subsp. sororia]1.8e-4498.97Show/hide
Query:  MAGINLISAAAAAAVLLVLASIFNNNIPHTQGLRLLPMEQEHPAVHLNSRPQSFHPSPIAATDVDVHGGDFRPTTPGHSPGAGHGLAPDSHVDSKIH
        MAGINLIS AAAAAVLLVLASIFNNNIPHTQGLRLLPMEQEHPAVHLNSRPQSFHPSPIAATDVDVHGGDFRPTTPGHSPGAGHGLAPDSHVDSKIH
Subjt:  MAGINLISAAAAAAVLLVLASIFNNNIPHTQGLRLLPMEQEHPAVHLNSRPQSFHPSPIAATDVDVHGGDFRPTTPGHSPGAGHGLAPDSHVDSKIH

KGN55172.1 hypothetical protein Csa_012400 [Cucumis sativus]5.9e-0842.59Show/hide
Query:  INLISAAAAAAVLLVLASIFN-----NNIPHTQGLRLLPMEQE-HPAVH-------LNSRPQSFHPSPIAAT-DVDVHGGDFRPTTPGHSPGAGHGLAPD
        I LIS   A   +L+L+S F+       +P T+ L  + + ++ HP +        L S P +F       T + +V GGDFRPTTPGHSPGAGH +AP 
Subjt:  INLISAAAAAAVLLVLASIFN-----NNIPHTQGLRLLPMEQE-HPAVH-------LNSRPQSFHPSPIAAT-DVDVHGGDFRPTTPGHSPGAGHGLAPD

Query:  SHVDSKIH
        SH+DSKIH
Subjt:  SHVDSKIH

TYK20222.1 hypothetical protein E5676_scaffold134G003590 [Cucumis melo var. makuwa]4.0e-1253.15Show/hide
Query:  INLISAAAAAAVLLVLASIFNNNIPHTQGLRLLPMEQ---------------EHPAV-HLNSRPQSF-HPSPIAATDVDVHGGDFRPTTPGHSPGAGHGL
        I LIS  AA   +L+L+S F  NI HTQ  RLLPME                E  AV  L S P +F H +  A  DV+V GGDFRPTTPGHSPGAGH +
Subjt:  INLISAAAAAAVLLVLASIFNNNIPHTQGLRLLPMEQ---------------EHPAV-HLNSRPQSF-HPSPIAATDVDVHGGDFRPTTPGHSPGAGHGL

Query:  APDSHVDSKIH
        AP SH+DSKIH
Subjt:  APDSHVDSKIH

TrEMBL top hitse value%identityAlignment
A0A0A0L3I5 Uncharacterized protein2.9e-0842.59Show/hide
Query:  INLISAAAAAAVLLVLASIFN-----NNIPHTQGLRLLPMEQE-HPAVH-------LNSRPQSFHPSPIAAT-DVDVHGGDFRPTTPGHSPGAGHGLAPD
        I LIS   A   +L+L+S F+       +P T+ L  + + ++ HP +        L S P +F       T + +V GGDFRPTTPGHSPGAGH +AP 
Subjt:  INLISAAAAAAVLLVLASIFN-----NNIPHTQGLRLLPMEQE-HPAVH-------LNSRPQSFHPSPIAAT-DVDVHGGDFRPTTPGHSPGAGHGLAPD

Query:  SHVDSKIH
        SH+DSKIH
Subjt:  SHVDSKIH

A0A5A7VEP2 Uncharacterized protein4.7e-1151.35Show/hide
Query:  INLISAAAAAAVLLVLASIFNNNIPHTQGLRLLPMEQ---------------EHPAV-HLNSRPQSF-HPSPIAATDVDVHGGDFRPTTPGHSPGAGHGL
        I LIS  AA   +L+L+S F  NI HTQ  RLLP+E                E  AV  L S P +F H +  A  DV+V GGDFRPTT GHSPGAGH +
Subjt:  INLISAAAAAAVLLVLASIFNNNIPHTQGLRLLPMEQ---------------EHPAV-HLNSRPQSF-HPSPIAATDVDVHGGDFRPTTPGHSPGAGHGL

Query:  APDSHVDSKIH
        AP SH+DSKIH
Subjt:  APDSHVDSKIH

A0A5D3D9H8 Uncharacterized protein1.9e-1253.15Show/hide
Query:  INLISAAAAAAVLLVLASIFNNNIPHTQGLRLLPMEQ---------------EHPAV-HLNSRPQSF-HPSPIAATDVDVHGGDFRPTTPGHSPGAGHGL
        I LIS  AA   +L+L+S F  NI HTQ  RLLPME                E  AV  L S P +F H +  A  DV+V GGDFRPTTPGHSPGAGH +
Subjt:  INLISAAAAAAVLLVLASIFNNNIPHTQGLRLLPMEQ---------------EHPAV-HLNSRPQSF-HPSPIAATDVDVHGGDFRPTTPGHSPGAGHGL

Query:  APDSHVDSKIH
        AP SH+DSKIH
Subjt:  APDSHVDSKIH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGGAATCAATCTCATCTCCGCCGCCGCCGCCGCCGCCGTCCTCCTGGTTTTAGCTTCTATCTTCAATAATAACATTCCACACACCCAAGGACTAAGGTTGCTGCC
AATGGAGCAGGAGCATCCAGCCGTCCATCTCAATTCGAGGCCACAGTCATTTCACCCCTCTCCCATTGCTGCTACAGACGTGGACGTGCATGGCGGCGACTTCCGTCCCA
CCACACCCGGCCACAGCCCCGGCGCCGGTCACGGCCTTGCGCCGGACAGCCACGTGGATTCCAAAATCCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCGGAATCAATCTCATCTCCGCCGCCGCCGCCGCCGCCGTCCTCCTGGTTTTAGCTTCTATCTTCAATAATAACATTCCACACACCCAAGGACTAAGGTTGCTGCC
AATGGAGCAGGAGCATCCAGCCGTCCATCTCAATTCGAGGCCACAGTCATTTCACCCCTCTCCCATTGCTGCTACAGACGTGGACGTGCATGGCGGCGACTTCCGTCCCA
CCACACCCGGCCACAGCCCCGGCGCCGGTCACGGCCTTGCGCCGGACAGCCACGTGGATTCCAAAATCCATTAG
Protein sequenceShow/hide protein sequence
MAGINLISAAAAAAVLLVLASIFNNNIPHTQGLRLLPMEQEHPAVHLNSRPQSFHPSPIAATDVDVHGGDFRPTTPGHSPGAGHGLAPDSHVDSKIH