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CmoCh01G019450 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G019450
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptiontRNA-processing ribonuclease BN
Genome locationCmo_Chr01:13850210..13852988
RNA-Seq ExpressionCmoCh01G019450
SyntenyCmoCh01G019450
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051699.1 uncharacterized protein E6C27_scaffold60G00840 [Cucumis melo var. makuwa]7.8e-0881.58Show/hide
Query:  AHFIERLMFQMRGLPTTPDLLEKSGALFAMMITFKSCG
        AHF+E LMFQMRGLPT+P+LLEKSGALFAMMITF+  G
Subjt:  AHFIERLMFQMRGLPTTPDLLEKSGALFAMMITFKSCG
TYK31605.1 TRNA-processing ribonuclease BN [Cucumis melo var. makuwa]7.8e-0881.58Show/hide
Query:  AHFIERLMFQMRGLPTTPDLLEKSGALFAMMITFKSCG
        AHF+E LMFQMRGLPT+P+LLEKSGALFAMMITF+  G
Subjt:  AHFIERLMFQMRGLPTTPDLLEKSGALFAMMITFKSCG
XP_008466634.1 PREDICTED: uncharacterized protein LOC103503989 [Cucumis melo]7.8e-0881.58Show/hide
Query:  AHFIERLMFQMRGLPTTPDLLEKSGALFAMMITFKSCG
        AHF+E LMFQMRGLPT+P+LLEKSGALFAMMITF+  G
Subjt:  AHFIERLMFQMRGLPTTPDLLEKSGALFAMMITFKSCG
XP_022138611.1 uncharacterized protein LOC111009450 [Momordica charantia]2.0e-0881.58Show/hide
Query:  AHFIERLMFQMRGLPTTPDLLEKSGALFAMMITFKSCG
        AHF+ERL+FQMRGLPTTP+LLEKSGALFAMM+TF+  G
Subjt:  AHFIERLMFQMRGLPTTPDLLEKSGALFAMMITFKSCG
XP_038905249.1 uncharacterized protein LOC120091332 [Benincasa hispida]1.8e-0989.47Show/hide
Query:  AHFIERLMFQMRGLPTTPDLLEKSGALFAMMITFKSCG
        AHF+ERLMFQMRGLPTTPDLLEKSGALFAMMITF+  G
Subjt:  AHFIERLMFQMRGLPTTPDLLEKSGALFAMMITFKSCG
TrEMBL top hitse value%identityAlignment
A0A1S3CRR4 uncharacterized protein LOC1035039893.8e-0881.58Show/hide
Query:  AHFIERLMFQMRGLPTTPDLLEKSGALFAMMITFKSCG
        AHF+E LMFQMRGLPT+P+LLEKSGALFAMMITF+  G
Subjt:  AHFIERLMFQMRGLPTTPDLLEKSGALFAMMITFKSCG
A0A2N9FQF7 Uncharacterized protein5.4e-0771.05Show/hide
Query:  AHFIERLMFQMRGLPTTPDLLEKSGALFAMMITFKSCG
        AHFIERLMF ++GLPT+P+LLE+SGALFAM++TF+  G
Subjt:  AHFIERLMFQMRGLPTTPDLLEKSGALFAMMITFKSCG
A0A5A7UDY4 Uncharacterized protein3.8e-0881.58Show/hide
Query:  AHFIERLMFQMRGLPTTPDLLEKSGALFAMMITFKSCG
        AHF+E LMFQMRGLPT+P+LLEKSGALFAMMITF+  G
Subjt:  AHFIERLMFQMRGLPTTPDLLEKSGALFAMMITFKSCG
A0A5D3E8K1 tRNA-processing ribonuclease BN3.8e-0881.58Show/hide
Query:  AHFIERLMFQMRGLPTTPDLLEKSGALFAMMITFKSCG
        AHF+E LMFQMRGLPT+P+LLEKSGALFAMMITF+  G
Subjt:  AHFIERLMFQMRGLPTTPDLLEKSGALFAMMITFKSCG
A0A6J1CA74 uncharacterized protein LOC1110094509.9e-0981.58Show/hide
Query:  AHFIERLMFQMRGLPTTPDLLEKSGALFAMMITFKSCG
        AHF+ERL+FQMRGLPTTP+LLEKSGALFAMM+TF+  G
Subjt:  AHFIERLMFQMRGLPTTPDLLEKSGALFAMMITFKSCG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTCGCAATCCGTCTGTCGTAGGGCTTCTCTCGACATTGGTCGGATTACGGGATGGTCGTGCTCGCTTTCGTCAACTGGAGTTAGTATTGGTTGTGAGATTTTTGA
TATAATGTTTGGCTGGGGATGTGTGGAAGAGGAAGAGAGGGGCGTTGATAATTTACCACTTGACAAAGCGCATTTTATAGAGAGGCTGATGTTCCAAATGAGAGGGCTTC
CCACCACTCCAGACTTGTTGGAAAAAAGTGGAGCTCTTTTTGCTATGATGATAACCTTTAAGTCCTGTGGG
mRNA sequenceShow/hide mRNA sequence
GGGAGTTTGAGGACAAGTTGCTCTGCTCTAAAGCCCTAAAAATATGGAGTCGCAATCCGTCTGTCGTAGGGCTTCTCTCGACATTGGTCGGATTACGGGATGGTCGTGCT
CGCTTTCGTCAACTGGAGTTAGTATTGGTTGTGAGATTTTTGATATAATGTTTGGCTGGGGATGTGTGGAAGAGGAAGAGAGGGGCGTTGATAATTTACCACTTGACAAA
GCGCATTTTATAGAGAGGCTGATGTTCCAAATGAGAGGGCTTCCCACCACTCCAGACTTGTTGGAAAAAAGTGGAGCTCTTTTTGCTATGATGATAACCTTTAAGTCCTG
TGGG
Protein sequenceShow/hide protein sequence
MESQSVCRRASLDIGRITGWSCSLSSTGVSIGCEIFDIMFGWGCVEEEERGVDNLPLDKAHFIERLMFQMRGLPTTPDLLEKSGALFAMMITFKSCG