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CmoCh01G019870 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G019870
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description50S ribosomal protein L31
Genome locationCmo_Chr01:14049622..14050109
RNA-Seq ExpressionCmoCh01G019870
SyntenyCmoCh01G019870
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608549.1 50S ribosomal protein L31, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.8e-6999.25Show/hide
Query:  MALNLTNSFLQRPFSPAIAPPKNKELGARRYRAVVTCRKKDIHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK
        MALNLTNSFLQRPFSPAIAPPKNKELGARRYR VVTCRKKDIHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK
Subjt:  MALNLTNSFLQRPFSPAIAPPKNKELGARRYRAVVTCRKKDIHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK

Query:  KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
        KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
Subjt:  KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK

XP_022936208.1 50S ribosomal protein L31, chloroplastic-like [Cucurbita moschata]2.5e-6593.23Show/hide
Query:  MALNLTNSFLQRPFSPAIAPPKNKELGARRYRAVVTCRKKDIHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK
        MALNLTNSFLQRP SP +APPK KE GAR +RAVVTCRKKD+HPQF+EDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK
Subjt:  MALNLTNSFLQRPFSPAIAPPKNKELGARRYRAVVTCRKKDIHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK

Query:  KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
        KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
Subjt:  KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK

XP_022940973.1 50S ribosomal protein L31, chloroplastic-like [Cucurbita moschata]7.5e-70100Show/hide
Query:  MALNLTNSFLQRPFSPAIAPPKNKELGARRYRAVVTCRKKDIHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK
        MALNLTNSFLQRPFSPAIAPPKNKELGARRYRAVVTCRKKDIHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK
Subjt:  MALNLTNSFLQRPFSPAIAPPKNKELGARRYRAVVTCRKKDIHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK

Query:  KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
        KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
Subjt:  KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK

XP_022981730.1 50S ribosomal protein L31, chloroplastic-like [Cucurbita maxima]3.1e-6897.74Show/hide
Query:  MALNLTNSFLQRPFSPAIAPPKNKELGARRYRAVVTCRKKDIHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK
        MALNLTNSFLQR FSPAIAPPKNKELGARRYR VVTCRKKD+HPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK
Subjt:  MALNLTNSFLQRPFSPAIAPPKNKELGARRYRAVVTCRKKDIHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK

Query:  KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
        KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
Subjt:  KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK

XP_023523361.1 50S ribosomal protein L31, chloroplastic-like [Cucurbita pepo subsp. pepo]2.8e-6999.25Show/hide
Query:  MALNLTNSFLQRPFSPAIAPPKNKELGARRYRAVVTCRKKDIHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK
        MALNLTNSFLQRPFSPAIAPPKNKELGARRYR VVTCRKKDIHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK
Subjt:  MALNLTNSFLQRPFSPAIAPPKNKELGARRYRAVVTCRKKDIHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK

Query:  KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
        KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
Subjt:  KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK

TrEMBL top hitse value%identityAlignment
A0A0A0LDC9 50S ribosomal protein L311.8e-6190.37Show/hide
Query:  MALNLTNSF--LQRPFSPAIAPPKNKELGARRYRAVVTCRKKDIHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
        MALNLTNSF  LQRP SPA+APPK KE GAR YR VVTCRKKD+HPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
Subjt:  MALNLTNSF--LQRPFSPAIAPPKNKELGARRYRAVVTCRKKDIHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF

Query:  RKKFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
        RKKFGELSQLMEIPVLKGEI+LP+KRKS  KGKKK
Subjt:  RKKFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK

A0A6J1FCM8 50S ribosomal protein L311.2e-6593.23Show/hide
Query:  MALNLTNSFLQRPFSPAIAPPKNKELGARRYRAVVTCRKKDIHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK
        MALNLTNSFLQRP SP +APPK KE GAR +RAVVTCRKKD+HPQF+EDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK
Subjt:  MALNLTNSFLQRPFSPAIAPPKNKELGARRYRAVVTCRKKDIHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK

Query:  KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
        KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
Subjt:  KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK

A0A6J1FQS6 50S ribosomal protein L313.6e-70100Show/hide
Query:  MALNLTNSFLQRPFSPAIAPPKNKELGARRYRAVVTCRKKDIHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK
        MALNLTNSFLQRPFSPAIAPPKNKELGARRYRAVVTCRKKDIHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK
Subjt:  MALNLTNSFLQRPFSPAIAPPKNKELGARRYRAVVTCRKKDIHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK

Query:  KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
        KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
Subjt:  KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK

A0A6J1IKY2 50S ribosomal protein L311.6e-6592.48Show/hide
Query:  MALNLTNSFLQRPFSPAIAPPKNKELGARRYRAVVTCRKKDIHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK
        MALNLTNSFLQRP SP +APPK KE GAR +RAVVTCRKKD+HPQF+EDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK
Subjt:  MALNLTNSFLQRPFSPAIAPPKNKELGARRYRAVVTCRKKDIHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK

Query:  KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
        KFGELSQLMEIPVLKGEI+LPTKRKSGGKGKKK
Subjt:  KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK

A0A6J1J0F9 50S ribosomal protein L31, chloroplastic1.5e-6897.74Show/hide
Query:  MALNLTNSFLQRPFSPAIAPPKNKELGARRYRAVVTCRKKDIHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK
        MALNLTNSFLQR FSPAIAPPKNKELGARRYR VVTCRKKD+HPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK
Subjt:  MALNLTNSFLQRPFSPAIAPPKNKELGARRYRAVVTCRKKDIHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRK

Query:  KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
        KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
Subjt:  KFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK

SwissProt top hitse value%identityAlignment
P82249 50S ribosomal protein L31, chloroplastic9.6e-4467.41Show/hide
Query:  MALNLTNSFLQR-PFSP-AIAPPKNKELGARRYRAVVTCRKKDIHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF
        M L L+N FL + P +P  +  PK     +   R   +CRK DIHP+F EDAKVYCNGELVMTTGGTQK+Y+V+VWSGNHPFYLG+RSALL+DADQVEKF
Subjt:  MALNLTNSFLQR-PFSP-AIAPPKNKELGARRYRAVVTCRKKDIHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKF

Query:  RKKFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
        RKK+GEL+Q+MEIPVLKGEI+LP K+KS  K KKK
Subjt:  RKKFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK

Q31L35 50S ribosomal protein L312.0e-1760.29Show/hide
Query:  KKDIHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDAD-QVEKFRKKFGEL
        K DIHPQ+Y +AKVYCNGE VMT G TQ E  VDVWSGNHPFY G++   ++D + +VE+F +K+G L
Subjt:  KKDIHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDAD-QVEKFRKKFGEL

Q5N0T7 50S ribosomal protein L312.0e-1760.29Show/hide
Query:  KKDIHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDAD-QVEKFRKKFGEL
        K DIHPQ+Y +AKVYCNGE VMT G TQ E  VDVWSGNHPFY G++   ++D + +VE+F +K+G L
Subjt:  KKDIHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDAD-QVEKFRKKFGEL

Q7V9Y9 50S ribosomal protein L312.0e-1760Show/hide
Query:  KKDIHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFG
        KKDIHP +Y DAKV CNGE+VMTTG TQ E  VDVWSGNHPF+ G++  L  +  +V++F +K+G
Subjt:  KKDIHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFG

Q9FWS4 50S ribosomal protein L31, chloroplastic3.5e-4664.58Show/hide
Query:  MALNLTNSFLQ--------RPFSPAIAPPKNKELGARRYRAVV---TCRKKDIHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALL
        MA++L NSFLQ        +   P +A  K  +   RR    V   TCRKK++HP+F+EDAKVYCNGELVMTTGGT+KEY VDVWSGNHPFYLG+RSAL+
Subjt:  MALNLTNSFLQ--------RPFSPAIAPPKNKELGARRYRAVV---TCRKKDIHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALL

Query:  VDADQVEKFRKKFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
        VDADQVEKFRK+F  LS++MEIPVLKGEI++PTK+  G KGKKK
Subjt:  VDADQVEKFRKKFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK

Arabidopsis top hitse value%identityAlignment
AT1G75350.1 Ribosomal protein L312.5e-4764.58Show/hide
Query:  MALNLTNSFLQ--------RPFSPAIAPPKNKELGARRYRAVV---TCRKKDIHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALL
        MA++L NSFLQ        +   P +A  K  +   RR    V   TCRKK++HP+F+EDAKVYCNGELVMTTGGT+KEY VDVWSGNHPFYLG+RSAL+
Subjt:  MALNLTNSFLQ--------RPFSPAIAPPKNKELGARRYRAVV---TCRKKDIHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALL

Query:  VDADQVEKFRKKFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK
        VDADQVEKFRK+F  LS++MEIPVLKGEI++PTK+  G KGKKK
Subjt:  VDADQVEKFRKKFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCTCAACCTAACAAATTCCTTCCTTCAACGGCCATTTTCTCCGGCTATCGCACCGCCGAAGAACAAGGAGTTGGGAGCGAGACGTTACCGGGCGGTGGTGACCTG
CCGGAAAAAGGATATTCATCCCCAATTCTACGAGGATGCGAAGGTTTATTGCAACGGAGAACTGGTGATGACGACCGGTGGGACTCAGAAAGAGTACTCCGTGGATGTGT
GGTCGGGAAATCACCCGTTCTATTTGGGCAGCCGCTCCGCTCTGCTAGTCGACGCTGATCAGGTGGAGAAATTCCGCAAGAAATTTGGAGAGCTGTCGCAATTGATGGAG
ATTCCTGTCCTTAAAGGTGAAATCGTTCTGCCCACAAAACGCAAATCCGGCGGCAAAGGGAAGAAGAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGCTCAACCTAACAAATTCCTTCCTTCAACGGCCATTTTCTCCGGCTATCGCACCGCCGAAGAACAAGGAGTTGGGAGCGAGACGTTACCGGGCGGTGGTGACCTG
CCGGAAAAAGGATATTCATCCCCAATTCTACGAGGATGCGAAGGTTTATTGCAACGGAGAACTGGTGATGACGACCGGTGGGACTCAGAAAGAGTACTCCGTGGATGTGT
GGTCGGGAAATCACCCGTTCTATTTGGGCAGCCGCTCCGCTCTGCTAGTCGACGCTGATCAGGTGGAGAAATTCCGCAAGAAATTTGGAGAGCTGTCGCAATTGATGGAG
ATTCCTGTCCTTAAAGGTGAAATCGTTCTGCCCACAAAACGCAAATCCGGCGGCAAAGGGAAGAAGAAGTAG
Protein sequenceShow/hide protein sequence
MALNLTNSFLQRPFSPAIAPPKNKELGARRYRAVVTCRKKDIHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLME
IPVLKGEIVLPTKRKSGGKGKKK