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CmoCh01G019980 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G019980
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionThioredoxin
Genome locationCmo_Chr01:14111135..14112186
RNA-Seq ExpressionCmoCh01G019980
SyntenyCmoCh01G019980
Gene Ontology termsGO:0006662 - glycerol ether metabolic process (biological process)
GO:0015035 - protein disulfide oxidoreductase activity (molecular function)
InterPro domainsIPR013766 - Thioredoxin domain
IPR017937 - Thioredoxin, conserved site
IPR036249 - Thioredoxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608561.1 Thioredoxin H1, partial [Cucurbita argyrosperma subsp. sororia]5.0e-5799.12Show/hide
Query:  SIMAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTATWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVG
        SIMAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTA WCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVG
Subjt:  SIMAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTATWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVG

Query:  ARKDQLQKIVLQNA
        ARKDQLQKIVLQNA
Subjt:  ARKDQLQKIVLQNA

KAG7037881.1 Thioredoxin H1 [Cucurbita argyrosperma subsp. argyrosperma]5.5e-5699.11Show/hide
Query:  MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTATWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR
        MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTA WCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR
Subjt:  MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTATWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR

Query:  KDQLQKIVLQNA
        KDQLQKIVLQNA
Subjt:  KDQLQKIVLQNA

XP_022941032.1 thioredoxin H1-like [Cucurbita moschata]1.7e-60100Show/hide
Query:  METIGSIMAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTATWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVV
        METIGSIMAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTATWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVV
Subjt:  METIGSIMAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTATWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVV

Query:  DRFVGARKDQLQKIVLQNA
        DRFVGARKDQLQKIVLQNA
Subjt:  DRFVGARKDQLQKIVLQNA

XP_022982430.1 thioredoxin H1-like [Cucurbita maxima]2.3e-5496.43Show/hide
Query:  MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTATWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR
        MAGKGEVIAC TVGSWKQQLLKGKQSNKLIVVDFTA WCGPCRAMAPVFAELAKK+SNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR
Subjt:  MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTATWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR

Query:  KDQLQKIVLQNA
        KDQLQKIVLQ+A
Subjt:  KDQLQKIVLQNA

XP_023525273.1 thioredoxin H1-like [Cucurbita pepo subsp. pepo]3.6e-5597.32Show/hide
Query:  MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTATWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR
        MAGKGEVIAC TVGSWKQQ+LKGKQSNKLIVVDFTA WCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR
Subjt:  MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTATWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR

Query:  KDQLQKIVLQNA
        KDQLQKIVLQNA
Subjt:  KDQLQKIVLQNA

TrEMBL top hitse value%identityAlignment
A0A5A7V9W3 Thioredoxin1.2e-4582.14Show/hide
Query:  MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTATWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR
        MA K +VI C TV SWKQQLLKGKQS+KLIVVDFTA WCGPCRA+APVF ELA+KMSNVIFLKVDVD+L  VAAEWGVSALPCFMFLKNG VVDRFVGAR
Subjt:  MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTATWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR

Query:  KDQLQKIVLQNA
        KD L+K+VL +A
Subjt:  KDQLQKIVLQNA

A0A6J1DWZ0 thioredoxin H1-like1.3e-4784.82Show/hide
Query:  MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTATWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR
        M  K EVIAC TVGSWKQQLLKGKQSNKLIVVDFTA WCGPCRAMAP+FAELA KMS+VIFLKVDVDEL  VAAEWGVSALPCF+FLKNG +VDRFVGAR
Subjt:  MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTATWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR

Query:  KDQLQKIVLQNA
        +D LQKI+LQ+A
Subjt:  KDQLQKIVLQNA

A0A6J1FL98 thioredoxin H1-like8.0e-61100Show/hide
Query:  METIGSIMAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTATWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVV
        METIGSIMAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTATWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVV
Subjt:  METIGSIMAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTATWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVV

Query:  DRFVGARKDQLQKIVLQNA
        DRFVGARKDQLQKIVLQNA
Subjt:  DRFVGARKDQLQKIVLQNA

A0A6J1IM69 thioredoxin H-type-like6.6e-4785.71Show/hide
Query:  MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTATWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR
        MA    VI C TVGSWKQQLLKGKQSNKLIVVDFTA WCGPCRA+AP FAELAKKMSNVIFLKVDVD+L  VAAEWGV ALPCFMFLKNGKVV RFVGAR
Subjt:  MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTATWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR

Query:  KDQLQKIVLQNA
        KD LQKIVLQ+A
Subjt:  KDQLQKIVLQNA

A0A6J1IZB4 thioredoxin H1-like1.1e-5496.43Show/hide
Query:  MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTATWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR
        MAGKGEVIAC TVGSWKQQLLKGKQSNKLIVVDFTA WCGPCRAMAPVFAELAKK+SNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR
Subjt:  MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTATWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR

Query:  KDQLQKIVLQNA
        KDQLQKIVLQ+A
Subjt:  KDQLQKIVLQNA

SwissProt top hitse value%identityAlignment
P29448 Thioredoxin H11.9e-3558.33Show/hide
Query:  KGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTATWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQ
        +G+VIAC TV +W +QL K  +S  L+VVDFTA+WCGPCR +AP FA+LAKK+ NV+FLKVD DEL +VA++W + A+P FMFLK GK++D+ VGA+KD+
Subjt:  KGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTATWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQ

Query:  LQKIVLQN
        LQ  + ++
Subjt:  LQKIVLQN

P29449 Thioredoxin H-type 11.4e-3355.96Show/hide
Query:  KGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTATWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQ
        +G+V  C  V  W +   KG ++ KL+VVDFTA+WCGPCR +AP+ A++AKKM +VIFLKVDVDEL  V+AEW V A+P F+F+K+GK VDR VGA+K++
Subjt:  KGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTATWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQ

Query:  LQKIVLQNA
        LQ+ ++++A
Subjt:  LQKIVLQNA

Q07090 Thioredoxin H-type 21.8e-3358.56Show/hide
Query:  MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTATWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR
        MA +G+VI   TV +W + L KG    KLIVVDFTA+WCGPC+ +A  +AELAKKM  V FLKVDVDEL +VA +W V A+P FMFLK GK+VD+ VGA+
Subjt:  MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTATWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR

Query:  KDQLQKIVLQN
        KD+LQ+ + ++
Subjt:  KDQLQKIVLQN

Q39241 Thioredoxin H54.0e-3354.95Show/hide
Query:  MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTATWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR
        MAG+GEVIAC T+  W +++    +S KLIV+DFTA+WC PCR +APVFAE+AKK +NV+F K+DVDEL AVA E+ V A+P F+F+K G ++DR VGA 
Subjt:  MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTATWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR

Query:  KDQLQKIVLQN
        KD++ + ++++
Subjt:  KDQLQKIVLQN

Q43636 Thioredoxin H-type9.5e-3560Show/hide
Query:  AGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTATWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARK
        A +G+VI C TV +W +QL KG  +  LIVVDFTA+WCGPCR +AP  AELAKK+ NV FLKVDVDEL  VA EW V ++P FMFLK GK++D+ VGA+K
Subjt:  AGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTATWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARK

Query:  DQLQKIVLQN
        D+LQ+ + ++
Subjt:  DQLQKIVLQN

Arabidopsis top hitse value%identityAlignment
AT1G19730.1 Thioredoxin superfamily protein4.5e-3257.66Show/hide
Query:  AGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTATWCGPCRAMAPVFAELAKK-MSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR
        A +G+VI C T   W  QL K K+SNKLIV+DFTA+WC PCR +AP+F +LAKK MS+ IF KVDVDEL +VA E+GV A+P F+F+K G+VVD+ VGA 
Subjt:  AGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTATWCGPCRAMAPVFAELAKK-MSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR

Query:  KDQLQKIVLQN
        K+ LQ  ++++
Subjt:  KDQLQKIVLQN

AT1G45145.1 thioredoxin H-type 52.8e-3454.95Show/hide
Query:  MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTATWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR
        MAG+GEVIAC T+  W +++    +S KLIV+DFTA+WC PCR +APVFAE+AKK +NV+F K+DVDEL AVA E+ V A+P F+F+K G ++DR VGA 
Subjt:  MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTATWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR

Query:  KDQLQKIVLQN
        KD++ + ++++
Subjt:  KDQLQKIVLQN

AT3G17880.1 tetraticopeptide domain-containing thioredoxin2.0e-2442.59Show/hide
Query:  GEVIACRTVGSWKQQLLKGKQSNKLIVVDFTATWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQL
        GEVI+  +    + +    K++++L+++ FTATWCGPCR M+P+++ LA + S V+FLKVD+D+   VAA W +S++P F F+++GK VD+ VGA K  L
Subjt:  GEVIACRTVGSWKQQLLKGKQSNKLIVVDFTATWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQL

Query:  QKIVLQNA
        ++ + Q++
Subjt:  QKIVLQNA

AT3G51030.1 thioredoxin H-type 11.4e-3658.33Show/hide
Query:  KGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTATWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQ
        +G+VIAC TV +W +QL K  +S  L+VVDFTA+WCGPCR +AP FA+LAKK+ NV+FLKVD DEL +VA++W + A+P FMFLK GK++D+ VGA+KD+
Subjt:  KGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTATWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQ

Query:  LQKIVLQN
        LQ  + ++
Subjt:  LQKIVLQN

AT5G42980.1 thioredoxin 31.5e-3056.73Show/hide
Query:  MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTATWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR
        MA +GEVIAC TV  W ++L    +S KLIV+DFTATWC PCR +APVFA+LAKK  +V+F KVDVDEL  VA E+ V A+P F+F+K G++ +  VGA 
Subjt:  MAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTATWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGAR

Query:  KDQL
        K+++
Subjt:  KDQL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGACGATCGGATCGATAATGGCGGGAAAGGGCGAAGTGATTGCGTGCCGTACCGTTGGATCATGGAAGCAGCAGCTCCTCAAAGGAAAACAATCCAATAAACTGAT
TGTTGTGGACTTCACTGCCACATGGTGCGGTCCGTGCCGTGCCATGGCTCCAGTTTTTGCAGAGTTGGCTAAGAAGATGAGTAATGTCATATTCTTGAAAGTCGATGTTG
ATGAATTGATGGCTGTTGCGGCGGAATGGGGAGTGAGTGCACTCCCTTGCTTCATGTTCTTGAAGAATGGGAAGGTGGTGGACAGGTTTGTAGGCGCAAGAAAAGATCAG
TTGCAGAAGATTGTATTACAGAATGCCTAA
mRNA sequenceShow/hide mRNA sequence
GTTGTATTTGATCTGTCGAAACGCACTCCCATCGTCGAGCGTTGGAAGGAAATTTGTTCAGATTCTTGAAGATGAGAAAGCGGAGCGCTCGTAGGCTTCCGGATGGTACG
ATATGCGCCGCAAATGGGGTTTTGCTGTTTGCACGTTCAATTCCTTGTCTTCTTTTTCTACTACTACTACTACTACTATAAATGGAGACGATCGGATCGATAATGGCGGG
AAAGGGCGAAGTGATTGCGTGCCGTACCGTTGGATCATGGAAGCAGCAGCTCCTCAAAGGAAAACAATCCAATAAACTGATTGTTGTGGACTTCACTGCCACATGGTGCG
GTCCGTGCCGTGCCATGGCTCCAGTTTTTGCAGAGTTGGCTAAGAAGATGAGTAATGTCATATTCTTGAAAGTCGATGTTGATGAATTGATGGCTGTTGCGGCGGAATGG
GGAGTGAGTGCACTCCCTTGCTTCATGTTCTTGAAGAATGGGAAGGTGGTGGACAGGTTTGTAGGCGCAAGAAAAGATCAGTTGCAGAAGATTGTATTACAGAATGCCTA
ATGGAAACTCTACGTTGGGGAGATTCCCTCATCCGTTCTTTGGATTTCATTGGAAGAGACAAAATTTTATGCAACTTTTGTGAGTTGCTATTAGTTGATGCTTTTAGTTT
GAACAATTTTTTTCTTGTTGTGTTGGATTGTTTTTCAATCAGTTTACTATTACGAGGCTATGTAATCAATGAACATCTATTCTTTTGTTGAATAAAAATGAGTTGCTGAA
TACATC
Protein sequenceShow/hide protein sequence
METIGSIMAGKGEVIACRTVGSWKQQLLKGKQSNKLIVVDFTATWCGPCRAMAPVFAELAKKMSNVIFLKVDVDELMAVAAEWGVSALPCFMFLKNGKVVDRFVGARKDQ
LQKIVLQNA