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CmoCh01G020220 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G020220
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionauxin-responsive protein SAUR50-like
Genome locationCmo_Chr01:14218591..14218908
RNA-Seq ExpressionCmoCh01G020220
SyntenyCmoCh01G020220
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608586.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]1.1e-5299.05Show/hide
Query:  MAIRKSTKMPQTAVLKQMLKRCSSLGKKQQQYDEQGLPLDVPKGHFVVYVGENRSRHIVPITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSL
        M IRKSTKMPQTAVLKQMLKRCSSLGKKQQQYDEQGLPLDVPKGHFVVYVGENRSRHIVPITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSL
Subjt:  MAIRKSTKMPQTAVLKQMLKRCSSLGKKQQQYDEQGLPLDVPKGHFVVYVGENRSRHIVPITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSL

Query:  TSTLR
        TSTLR
Subjt:  TSTLR

XP_010104433.1 auxin-responsive protein SAUR50 [Morus notabilis]6.8e-4281.9Show/hide
Query:  MAIRKSTKMPQTAVLKQMLKRCSSLGKKQQQYDEQGLPLDVPKGHFVVYVGENRSRHIVPITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSL
        MAIRKS ++PQTAVLKQ+LKRCSSLGKKQQ YDEQGLPLDVPKGHFVVYVGENRSR+IVPI++L  P+FQ LLQQA +EFGFDHDMGLTIPC+E  F SL
Subjt:  MAIRKSTKMPQTAVLKQMLKRCSSLGKKQQQYDEQGLPLDVPKGHFVVYVGENRSRHIVPITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSL

Query:  TSTLR
        TS LR
Subjt:  TSTLR

XP_022937029.1 auxin-responsive protein SAUR50-like [Cucurbita moschata]6.2e-4388.12Show/hide
Query:  TKMPQTAVLKQMLKRCSSLGKKQQQY--DEQGLPLDVPKGHFVVYVGENRSRHIVPITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSLTSTL
        TKMPQTAVLKQM+KRCSS+G+KQ Q+  D  GLPLDVPKGHFVVYVGENRSR+IVPIT+LNHPQFQILLQQAADEFGFDHDMGLTIPCDEH FQSLTSTL
Subjt:  TKMPQTAVLKQMLKRCSSLGKKQQQY--DEQGLPLDVPKGHFVVYVGENRSRHIVPITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSLTSTL

Query:  R
        R
Subjt:  R

XP_022941161.1 auxin-responsive protein SAUR50-like [Cucurbita moschata]3.9e-53100Show/hide
Query:  MAIRKSTKMPQTAVLKQMLKRCSSLGKKQQQYDEQGLPLDVPKGHFVVYVGENRSRHIVPITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSL
        MAIRKSTKMPQTAVLKQMLKRCSSLGKKQQQYDEQGLPLDVPKGHFVVYVGENRSRHIVPITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSL
Subjt:  MAIRKSTKMPQTAVLKQMLKRCSSLGKKQQQYDEQGLPLDVPKGHFVVYVGENRSRHIVPITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSL

Query:  TSTLR
        TSTLR
Subjt:  TSTLR

XP_023535895.1 auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo]2.3e-4287.13Show/hide
Query:  TKMPQTAVLKQMLKRCSSLGKKQQQY--DEQGLPLDVPKGHFVVYVGENRSRHIVPITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSLTSTL
        TKMPQTAVLKQM+KRCSS+G+KQ  +  D  GLPLDVPKGHFVVYVGENRSR+IVPIT+LNHPQFQILLQQAADEFGFDHDMGLTIPCDEH FQSLTSTL
Subjt:  TKMPQTAVLKQMLKRCSSLGKKQQQY--DEQGLPLDVPKGHFVVYVGENRSRHIVPITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSLTSTL

Query:  R
        R
Subjt:  R

TrEMBL top hitse value%identityAlignment
A0A6J1F9Z6 auxin-responsive protein SAUR50-like3.0e-4388.12Show/hide
Query:  TKMPQTAVLKQMLKRCSSLGKKQQQY--DEQGLPLDVPKGHFVVYVGENRSRHIVPITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSLTSTL
        TKMPQTAVLKQM+KRCSS+G+KQ Q+  D  GLPLDVPKGHFVVYVGENRSR+IVPIT+LNHPQFQILLQQAADEFGFDHDMGLTIPCDEH FQSLTSTL
Subjt:  TKMPQTAVLKQMLKRCSSLGKKQQQY--DEQGLPLDVPKGHFVVYVGENRSRHIVPITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSLTSTL

Query:  R
        R
Subjt:  R

A0A6J1FKC5 auxin-responsive protein SAUR50-like1.9e-53100Show/hide
Query:  MAIRKSTKMPQTAVLKQMLKRCSSLGKKQQQYDEQGLPLDVPKGHFVVYVGENRSRHIVPITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSL
        MAIRKSTKMPQTAVLKQMLKRCSSLGKKQQQYDEQGLPLDVPKGHFVVYVGENRSRHIVPITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSL
Subjt:  MAIRKSTKMPQTAVLKQMLKRCSSLGKKQQQYDEQGLPLDVPKGHFVVYVGENRSRHIVPITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSL

Query:  TSTLR
        TSTLR
Subjt:  TSTLR

A0A6J1IE85 auxin-responsive protein SAUR50-like3.0e-4388.12Show/hide
Query:  TKMPQTAVLKQMLKRCSSLGKKQQQY--DEQGLPLDVPKGHFVVYVGENRSRHIVPITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSLTSTL
        TKMPQTAVLKQM+KRCSS+G+KQ Q+  D  GLPLDVPKGHFVVYVGENRSR+IVPIT+LNHPQFQILLQQAADEFGFDHDMGLTIPCDEH FQSLTSTL
Subjt:  TKMPQTAVLKQMLKRCSSLGKKQQQY--DEQGLPLDVPKGHFVVYVGENRSRHIVPITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSLTSTL

Query:  R
        R
Subjt:  R

A0A6J1J0M7 auxin-responsive protein SAUR50-like1.9e-53100Show/hide
Query:  MAIRKSTKMPQTAVLKQMLKRCSSLGKKQQQYDEQGLPLDVPKGHFVVYVGENRSRHIVPITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSL
        MAIRKSTKMPQTAVLKQMLKRCSSLGKKQQQYDEQGLPLDVPKGHFVVYVGENRSRHIVPITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSL
Subjt:  MAIRKSTKMPQTAVLKQMLKRCSSLGKKQQQYDEQGLPLDVPKGHFVVYVGENRSRHIVPITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSL

Query:  TSTLR
        TSTLR
Subjt:  TSTLR

W9RZ83 Uncharacterized protein3.3e-4281.9Show/hide
Query:  MAIRKSTKMPQTAVLKQMLKRCSSLGKKQQQYDEQGLPLDVPKGHFVVYVGENRSRHIVPITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSL
        MAIRKS ++PQTAVLKQ+LKRCSSLGKKQQ YDEQGLPLDVPKGHFVVYVGENRSR+IVPI++L  P+FQ LLQQA +EFGFDHDMGLTIPC+E  F SL
Subjt:  MAIRKSTKMPQTAVLKQMLKRCSSLGKKQQQYDEQGLPLDVPKGHFVVYVGENRSRHIVPITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSL

Query:  TSTLR
        TS LR
Subjt:  TSTLR

SwissProt top hitse value%identityAlignment
O65695 Auxin-responsive protein SAUR503.1e-3772.12Show/hide
Query:  IRKSTKMPQTAVLKQMLKRCSSLGKKQ-QQYDEQGLPLDVPKGHFVVYVGENRSRHIVPITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSLT
        ++K++K+ QTA+LKQ+LKRCSSLGKK    YDE  LPLDVPKGHF VYVGENRSR+IVPI++L HP+FQ LLQ+A +EFGFDHDMGLTIPCDE  FQ+LT
Subjt:  IRKSTKMPQTAVLKQMLKRCSSLGKKQ-QQYDEQGLPLDVPKGHFVVYVGENRSRHIVPITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSLT

Query:  STLR
        S +R
Subjt:  STLR

P0DKL1 Auxin-responsive protein SAUR504.9e-2757.84Show/hide
Query:  IRKSTKMPQTAVLKQMLKRCSSLGKKQQQYDEQGLPLDVPKGHFVVYVGENRSRHIVPITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSLTS
        IRKS K  Q   +K+++K+CSS GK     D+ GLP DVPKGHFVVYVGE R+R+IVPI+ L+HP FQ LLQ++ +EFGF+HDMG+ IPC E  F S  S
Subjt:  IRKSTKMPQTAVLKQMLKRCSSLGKKQQQYDEQGLPLDVPKGHFVVYVGENRSRHIVPITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSLTS

Query:  TL
         +
Subjt:  TL

P32295 Indole-3-acetic acid-induced protein ARG72.7e-1759.7Show/hide
Query:  LDVPKGHFVVYVGENRSRHIVPITYLNHPQFQILLQQAADEFGFDHDM-GLTIPCDEHFFQSLTSTL
        LD PKG+  VYVGEN  R ++P+++LN P FQ LL QA +EFG+DH M GLTIPC E  FQ +TS L
Subjt:  LDVPKGHFVVYVGENRSRHIVPITYLNHPQFQILLQQAADEFGFDHDM-GLTIPCDEHFFQSLTSTL

P33081 Auxin-induced protein 15A1.0e-1659.09Show/hide
Query:  DVPKGHFVVYVGENRSRHIVPITYLNHPQFQILLQQAADEFGFDHDM-GLTIPCDEHFFQSLTSTL
        D PKG+  VYVGE   R ++P++YLN P FQ LL QA +EFG+DH M GLTIPC E  FQ +TS L
Subjt:  DVPKGHFVVYVGENRSRHIVPITYLNHPQFQILLQQAADEFGFDHDM-GLTIPCDEHFFQSLTSTL

Q9SL45 Protein SMALL AUXIN UP-REGULATED RNA 106.9e-2959.82Show/hide
Query:  MAIRKSTK--MPQTAVLKQMLKRCSSLGKKQQ-----QYDEQGLPLDVPKGHFVVYVGENRSRHIVPITYLNHPQFQILLQQAADEFGFDHDMGLTIPCD
        MAI++S+K    Q A +KQ++KRCSSL K +         E  LP DVPKGHF VYVG NRSR+IVPI++L+H +FQ LL+ A +EFGFDHDMGLTIPCD
Subjt:  MAIRKSTK--MPQTAVLKQMLKRCSSLGKKQQ-----QYDEQGLPLDVPKGHFVVYVGENRSRHIVPITYLNHPQFQILLQQAADEFGFDHDMGLTIPCD

Query:  EHFFQSLTSTLR
        E FF+SL S  R
Subjt:  EHFFQSLTSTLR

Arabidopsis top hitse value%identityAlignment
AT1G75580.1 SAUR-like auxin-responsive protein family2.9e-3868.52Show/hide
Query:  MAIRKSTKMPQTAVLKQMLKRCSSLGKKQQQY---DEQGLPLDVPKGHFVVYVGENRSRHIVPITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFF
        MA++K+ K+ QTA++KQ+LKRCSSLGKKQ      DE G PL+VPKGHFVVYVGENR R++VPI++L  P+FQ+LLQQA +EFGFDHDMGLTIPC+E  F
Subjt:  MAIRKSTKMPQTAVLKQMLKRCSSLGKKQQQY---DEQGLPLDVPKGHFVVYVGENRSRHIVPITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFF

Query:  QSLTSTLR
        +SLTS LR
Subjt:  QSLTSTLR

AT2G16580.1 SAUR-like auxin-responsive protein family6.0e-3668.57Show/hide
Query:  IRKSTKMPQTAVLKQMLKRCSSLGKKQ--QQYDEQGLPLDVPKGHFVVYVGENRSRHIVPITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSL
        ++KSTK+ QTA+L+Q+LKRCSSLGKK     Y+E  LPLDVPKGHF VYVG NRSR+IVPI++L +  FQ LL++A +EFGFDHDMGLTIPCDE FFQ L
Subjt:  IRKSTKMPQTAVLKQMLKRCSSLGKKQ--QQYDEQGLPLDVPKGHFVVYVGENRSRHIVPITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSL

Query:  TSTLR
        TS +R
Subjt:  TSTLR

AT2G21220.1 SAUR-like auxin-responsive protein family3.2e-3769.23Show/hide
Query:  MAIRKSTKMPQTAVLKQMLKRCSSLGKKQQQYDEQGLPLDVPKGHFVVYVGENRSRHIVPITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSL
        MA+++S+K+ QTA+LKQ+LKRCSSL  K Q YDE GLP+DVPKGHF VYVGE RSR+IVPI++L HP+F+ LLQQA +EFGF+HDMGLTIPC+E  F+SL
Subjt:  MAIRKSTKMPQTAVLKQMLKRCSSLGKKQQQYDEQGLPLDVPKGHFVVYVGENRSRHIVPITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSL

Query:  TSTL
        TS +
Subjt:  TSTL

AT4G34760.1 SAUR-like auxin-responsive protein family2.2e-3872.12Show/hide
Query:  IRKSTKMPQTAVLKQMLKRCSSLGKKQ-QQYDEQGLPLDVPKGHFVVYVGENRSRHIVPITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSLT
        ++K++K+ QTA+LKQ+LKRCSSLGKK    YDE  LPLDVPKGHF VYVGENRSR+IVPI++L HP+FQ LLQ+A +EFGFDHDMGLTIPCDE  FQ+LT
Subjt:  IRKSTKMPQTAVLKQMLKRCSSLGKKQ-QQYDEQGLPLDVPKGHFVVYVGENRSRHIVPITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSLT

Query:  STLR
        S +R
Subjt:  STLR

AT4G38860.1 SAUR-like auxin-responsive protein family1.1e-3771.7Show/hide
Query:  MAIRKSTKMPQTAVLKQMLKRCSSLGKKQQQYDEQGLPLDVPKGHFVVYVGENRSRHIVPITYLNHPQFQILLQQAADEFGFDHDM-GLTIPCDEHFFQS
        MA+++S+K+ QTA+LKQ+LKRCSSLGKK Q YDE+GLPLDVPKGHF VYVGE R+R+IVPI++L HP+F ILLQQA +EFGF HDM GLTIPC+E  F S
Subjt:  MAIRKSTKMPQTAVLKQMLKRCSSLGKKQQQYDEQGLPLDVPKGHFVVYVGENRSRHIVPITYLNHPQFQILLQQAADEFGFDHDM-GLTIPCDEHFFQS

Query:  LTSTLR
        LTS +R
Subjt:  LTSTLR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATCAGAAAGTCCACCAAAATGCCACAGACCGCAGTGCTGAAGCAGATGCTGAAGCGCTGCTCTAGCTTGGGGAAGAAGCAGCAGCAGTACGACGAACAGGGCCT
CCCTTTGGACGTCCCCAAGGGCCATTTCGTGGTGTACGTAGGAGAAAATCGAAGCAGACACATTGTCCCCATCACATATTTGAATCACCCACAGTTCCAAATCTTGCTCC
AGCAAGCAGCTGATGAATTTGGGTTCGATCATGACATGGGCCTCACCATTCCCTGCGATGAGCACTTCTTTCAGTCCCTAACTTCCACCCTTCGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCATCAGAAAGTCCACCAAAATGCCACAGACCGCAGTGCTGAAGCAGATGCTGAAGCGCTGCTCTAGCTTGGGGAAGAAGCAGCAGCAGTACGACGAACAGGGCCT
CCCTTTGGACGTCCCCAAGGGCCATTTCGTGGTGTACGTAGGAGAAAATCGAAGCAGACACATTGTCCCCATCACATATTTGAATCACCCACAGTTCCAAATCTTGCTCC
AGCAAGCAGCTGATGAATTTGGGTTCGATCATGACATGGGCCTCACCATTCCCTGCGATGAGCACTTCTTTCAGTCCCTAACTTCCACCCTTCGATGA
Protein sequenceShow/hide protein sequence
MAIRKSTKMPQTAVLKQMLKRCSSLGKKQQQYDEQGLPLDVPKGHFVVYVGENRSRHIVPITYLNHPQFQILLQQAADEFGFDHDMGLTIPCDEHFFQSLTSTLR