; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh01G020290 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G020290
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptiongibberellin-regulated protein 1-like
Genome locationCmo_Chr01:14246135..14247088
RNA-Seq ExpressionCmoCh01G020290
SyntenyCmoCh01G020290
Gene Ontology termsGO:0009740 - gibberellic acid mediated signaling pathway (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR003854 - Gibberellin regulated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608594.1 Snakin-2, partial [Cucurbita argyrosperma subsp. sororia]9.6e-5297.17Show/hide
Query:  MAISGLSKALVTCVLMSLLVVHLVAADEEVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPNLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHG
        MAISGLSKAL+TCVLMSLLVVHLVAADE+VNSIHGVAAHPANIQSIDCGGACASRCKLSSRP+LCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHG
Subjt:  MAISGLSKALVTCVLMSLLVVHLVAADEEVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPNLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHG

Query:  GRRKCP
        GRRKCP
Subjt:  GRRKCP

XP_022139249.1 gibberellin-regulated protein 11-like [Momordica charantia]1.1e-3473.58Show/hide
Query:  MAISGLSKALVTCVLMSLLVVHLVAADEEVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPNLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHG
        MA S LSK L+TCV MSLLV+  V A E+VN   G  A P  IQ+IDCGGACA RCKLSSRPNLCKRACGTCCARC+CVPPGTSGGY+ CPCYA +TT G
Subjt:  MAISGLSKALVTCVLMSLLVVHLVAADEEVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPNLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHG

Query:  GRRKCP
        GR KCP
Subjt:  GRRKCP

XP_022940222.1 gibberellin-regulated protein 1-like [Cucurbita moschata]3.9e-53100Show/hide
Query:  MAISGLSKALVTCVLMSLLVVHLVAADEEVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPNLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHG
        MAISGLSKALVTCVLMSLLVVHLVAADEEVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPNLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHG
Subjt:  MAISGLSKALVTCVLMSLLVVHLVAADEEVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPNLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHG

Query:  GRRKCP
        GRRKCP
Subjt:  GRRKCP

XP_022982305.1 gibberellin-regulated protein 1-like [Cucurbita maxima]4.8e-5195.28Show/hide
Query:  MAISGLSKALVTCVLMSLLVVHLVAADEEVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPNLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHG
        MAISGLSKALVTCVLMSLLVVHLV ADE+VNSIHGVAAHPAN+QSIDCGGACASRCKLSSRP+LCKRACGTCCARCNCVPPGTSGGYETCPCYAS+TTHG
Subjt:  MAISGLSKALVTCVLMSLLVVHLVAADEEVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPNLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHG

Query:  GRRKCP
        GRRKCP
Subjt:  GRRKCP

XP_023525231.1 snakin-2-like [Cucurbita pepo subsp. pepo]1.1e-5094.34Show/hide
Query:  MAISGLSKALVTCVLMSLLVVHLVAADEEVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPNLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHG
        MAISGLSKAL+TCVLMSLLVVHLV AD++VNSIHGVAAHPANIQSIDCGGACASRCKLSSRP+LCKRACGTCCARCNCVPPGTSGGYETCPCYAS+TTHG
Subjt:  MAISGLSKALVTCVLMSLLVVHLVAADEEVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPNLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHG

Query:  GRRKCP
        GRRKCP
Subjt:  GRRKCP

TrEMBL top hitse value%identityAlignment
A0A0A0LDK8 Uncharacterized protein7.7e-3170.59Show/hide
Query:  LSKALVTCVLMSLLVVHLVAADEEVNSIHGVAA-HPANIQSIDCGGACASRCKLSSRPNLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHGGRRK
        L K +V  +  SLLV+  V AD+++  + GVAA  P   Q+IDCGGACASRCKLSSRPNLC RACGTCCARC+CVPPGTSG YE CPCYA+LTTHGGRRK
Subjt:  LSKALVTCVLMSLLVVHLVAADEEVNSIHGVAA-HPANIQSIDCGGACASRCKLSSRPNLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHGGRRK

Query:  CP
        CP
Subjt:  CP

A0A5D3E7E4 Gibberellin-regulated protein 11-like1.3e-3070.3Show/hide
Query:  LSKALVTCVLMSLLVVHLVAADEEVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPNLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHGGRRKC
        + K +   V MSLLV+  V AD+    + GVAA P   Q+I+CGGACASRCKLSSRPNLCKRACGTCCARC+CVPPGTSG Y  CPCYA LTTHGGRRKC
Subjt:  LSKALVTCVLMSLLVVHLVAADEEVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPNLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHGGRRKC

Query:  P
        P
Subjt:  P

A0A6J1CCE1 gibberellin-regulated protein 11-like5.2e-3573.58Show/hide
Query:  MAISGLSKALVTCVLMSLLVVHLVAADEEVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPNLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHG
        MA S LSK L+TCV MSLLV+  V A E+VN   G  A P  IQ+IDCGGACA RCKLSSRPNLCKRACGTCCARC+CVPPGTSGGY+ CPCYA +TT G
Subjt:  MAISGLSKALVTCVLMSLLVVHLVAADEEVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPNLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHG

Query:  GRRKCP
        GR KCP
Subjt:  GRRKCP

A0A6J1FJ01 gibberellin-regulated protein 1-like1.9e-53100Show/hide
Query:  MAISGLSKALVTCVLMSLLVVHLVAADEEVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPNLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHG
        MAISGLSKALVTCVLMSLLVVHLVAADEEVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPNLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHG
Subjt:  MAISGLSKALVTCVLMSLLVVHLVAADEEVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPNLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHG

Query:  GRRKCP
        GRRKCP
Subjt:  GRRKCP

A0A6J1J2A8 gibberellin-regulated protein 1-like2.3e-5195.28Show/hide
Query:  MAISGLSKALVTCVLMSLLVVHLVAADEEVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPNLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHG
        MAISGLSKALVTCVLMSLLVVHLV ADE+VNSIHGVAAHPAN+QSIDCGGACASRCKLSSRP+LCKRACGTCCARCNCVPPGTSGGYETCPCYAS+TTHG
Subjt:  MAISGLSKALVTCVLMSLLVVHLVAADEEVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPNLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHG

Query:  GRRKCP
        GRRKCP
Subjt:  GRRKCP

SwissProt top hitse value%identityAlignment
F4IQJ4 Gibberellin-regulated protein 117.2e-2658.59Show/hide
Query:  KALVTCVLMSLLVVHLVAADEEVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPNLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHGGRRKCP
        + L+  +L+SLLV+  V AD   ++         +   IDC   C  RC LSSRPNLC RACGTCCARCNCV PGTSG Y+ CPCY SLTTHGGRRKCP
Subjt:  KALVTCVLMSLLVVHLVAADEEVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPNLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHGGRRKCP

P46687 Gibberellin-regulated protein 32.4e-2152.58Show/hide
Query:  VLMSLLVVHLVAADEEVNSIHGVAAHPA----NIQSIDCGGACASRCKLSSRPNLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHGGRRKCP
        +  S LV+ L+        +H  AA  +     +  IDCGG C  RC  SSRPNLC RAC +CC RCNCVPPGT+G +  CPCYAS+TT GGR KCP
Subjt:  VLMSLLVVHLVAADEEVNSIHGVAAHPA----NIQSIDCGGACASRCKLSSRPNLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHGGRRKCP

P46688 Gibberellin-regulated protein 21.4e-2153.76Show/hide
Query:  VLMSLLVVHLVAADEEVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPNLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHGGRRKCP
        +++ L++V L   +  V++  G A     +  IDCGG C  RC  SSR  LC RAC +CC+RCNCVPPGTSG    CPCYAS+TTHGGR KCP
Subjt:  VLMSLLVVHLVAADEEVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPNLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHGGRRKCP

P46689 Gibberellin-regulated protein 14.5e-2862.75Show/hide
Query:  LSKALVTCVLMSLLVVHLVAAD-EEVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPNLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHGGRRK
        +SKAL+  +L+SLLV+ LV AD E     +G A      + IDCG AC +RC+LS RP LC RACGTCC RCNCVPPGT G Y+ C CYASLTTHGGRRK
Subjt:  LSKALVTCVLMSLLVVHLVAAD-EEVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPNLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHGGRRK

Query:  CP
        CP
Subjt:  CP

Q93X17 Snakin-22.4e-2962.5Show/hide
Query:  LSKALVTCVLMSLLV---VHLVAADEEVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPNLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHGGR
        +SKAL   +L+SLL+   V  +  D+  ++    AA+  + + IDCGGACA+RC+LSSRP LC RACGTCCARCNCVPPGTSG  ETCPCYASLTTHG +
Subjt:  LSKALVTCVLMSLLV---VHLVAADEEVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPNLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHGGR

Query:  RKCP
        RKCP
Subjt:  RKCP

Arabidopsis top hitse value%identityAlignment
AT1G75750.1 GAST1 protein homolog 13.2e-2962.75Show/hide
Query:  LSKALVTCVLMSLLVVHLVAAD-EEVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPNLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHGGRRK
        +SKAL+  +L+SLLV+ LV AD E     +G A      + IDCG AC +RC+LS RP LC RACGTCC RCNCVPPGT G Y+ C CYASLTTHGGRRK
Subjt:  LSKALVTCVLMSLLVVHLVAAD-EEVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPNLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHGGRRK

Query:  CP
        CP
Subjt:  CP

AT1G75750.2 GAST1 protein homolog 11.3e-3063.37Show/hide
Query:  LSKALVTCVLMSLLVVHLVAADEEVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPNLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHGGRRKC
        +SKAL+  +L+SLLV+ LV ADE     +G A      + IDCG AC +RC+LS RP LC RACGTCC RCNCVPPGT G Y+ C CYASLTTHGGRRKC
Subjt:  LSKALVTCVLMSLLVVHLVAADEEVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPNLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHGGRRKC

Query:  P
        P
Subjt:  P

AT2G18420.1 Gibberellin-regulated family protein5.1e-2758.59Show/hide
Query:  KALVTCVLMSLLVVHLVAADEEVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPNLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHGGRRKCP
        + L+  +L+SLLV+  V AD   ++         +   IDC   C  RC LSSRPNLC RACGTCCARCNCV PGTSG Y+ CPCY SLTTHGGRRKCP
Subjt:  KALVTCVLMSLLVVHLVAADEEVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPNLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHGGRRKCP

AT4G09600.1 GAST1 protein homolog 31.7e-2252.58Show/hide
Query:  VLMSLLVVHLVAADEEVNSIHGVAAHPA----NIQSIDCGGACASRCKLSSRPNLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHGGRRKCP
        +  S LV+ L+        +H  AA  +     +  IDCGG C  RC  SSRPNLC RAC +CC RCNCVPPGT+G +  CPCYAS+TT GGR KCP
Subjt:  VLMSLLVVHLVAADEEVNSIHGVAAHPA----NIQSIDCGGACASRCKLSSRPNLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHGGRRKCP

AT4G09610.1 GAST1 protein homolog 21.0e-2253.76Show/hide
Query:  VLMSLLVVHLVAADEEVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPNLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHGGRRKCP
        +++ L++V L   +  V++  G A     +  IDCGG C  RC  SSR  LC RAC +CC+RCNCVPPGTSG    CPCYAS+TTHGGR KCP
Subjt:  VLMSLLVVHLVAADEEVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPNLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHGGRRKCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATCTCTGGTCTTTCCAAGGCTTTGGTCACCTGTGTTCTCATGTCCCTTCTCGTCGTTCATTTGGTTGCAGCTGATGAAGAGGTGAACTCAATTCATGGCGTTGC
GGCTCATCCTGCTAATATACAAAGCATTGATTGTGGGGGAGCTTGTGCGTCCAGGTGCAAATTATCTTCAAGGCCAAATCTTTGCAAGAGGGCATGCGGGACGTGCTGTG
CGCGTTGCAACTGCGTGCCGCCGGGCACTTCCGGCGGCTACGAAACCTGCCCGTGCTACGCCAGCTTGACCACTCACGGCGGCCGGAGAAAGTGTCCCTAA
mRNA sequenceShow/hide mRNA sequence
CCACTCTCCACCACCTTTTTTCATCTATAAATATGAACCATTTCCTTTCTCATTCATATCACGTACAACAAACATTTTAACAATCCTCTGCTTCGTCTCCCATGGCCATC
TCTGGTCTTTCCAAGGCTTTGGTCACCTGTGTTCTCATGTCCCTTCTCGTCGTTCATTTGGTTGCAGCTGATGAAGAGGTGAACTCAATTCATGGCGTTGCGGCTCATCC
TGCTAATATACAAAGCATTGATTGTGGGGGAGCTTGTGCGTCCAGGTGCAAATTATCTTCAAGGCCAAATCTTTGCAAGAGGGCATGCGGGACGTGCTGTGCGCGTTGCA
ACTGCGTGCCGCCGGGCACTTCCGGCGGCTACGAAACCTGCCCGTGCTACGCCAGCTTGACCACTCACGGCGGCCGGAGAAAGTGTCCCTAAATAAAGAATTATTCAAAG
TTCTCTGCATATATTATTTGTGCATGCAACGTGTCTGCTACTTAAATCGAATCAGGGTTATGTTGGAGTTTGATTAATGATTATGAGTTTCAAGCGTGTTTGAAATATGA
AATTAATGTAAAATAAAGGGAATCTGTGAAAACCAGATTCTTGTGTCTCTGTCTCTTTTGTTTGTTTGGCCTATTACATGAATATAAGAGGTATGAATTATTTTGTACGT
TTCTTGGACTTGGAAGAAAAGTGGGTCTGTTTTTAATTCTGTGTTAAAGCTAAAATTAATGGATCAACTGCTTTCTGAGCCGACCA
Protein sequenceShow/hide protein sequence
MAISGLSKALVTCVLMSLLVVHLVAADEEVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPNLCKRACGTCCARCNCVPPGTSGGYETCPCYASLTTHGGRRKCP