; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh01G020320 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G020320
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionTransmembrane protein
Genome locationCmo_Chr01:14257452..14257799
RNA-Seq ExpressionCmoCh01G020320
SyntenyCmoCh01G020320
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063287.1 hypothetical protein E6C27_scaffold205G001100 [Cucumis melo var. makuwa]1.3e-4182.46Show/hide
Query:  MSWAEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQSQEMALDFKLFLLALPFLLIFIANSLLVSGSVASTAMRTKNRSAQEAEKTSPWGA
        MSW  EER PEWKYGW ER +ASMS PPMPLLAFLGVV+LLLSLQSQ+M LDFKL LLALPFL+IF ANS+ VSG+V S AMRTK+RSAQEAE+TSPWGA
Subjt:  MSWAEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQSQEMALDFKLFLLALPFLLIFIANSLLVSGSVASTAMRTKNRSAQEAEKTSPWGA

Query:  AVLLFLLLILLWNR
        AVLLFLLLILLWNR
Subjt:  AVLLFLLLILLWNR

KAG6608597.1 hypothetical protein SDJN03_01939, partial [Cucurbita argyrosperma subsp. sororia]2.8e-4994.78Show/hide
Query:  MSWAEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQSQEMALDFKLFLLALPFLLIFIANSLLVSGSVASTAMRTKNRSAQEAEKTSPWGA
        MSWAEEERV EWKYGWAERT+ASMS PPMPLLAFLGVVLLLLSLQSQ+MA DFKLFLLALPFLLIFIANSLLV+GSVASTAMRTKNRSAQEAEKTSPWGA
Subjt:  MSWAEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQSQEMALDFKLFLLALPFLLIFIANSLLVSGSVASTAMRTKNRSAQEAEKTSPWGA

Query:  AVLLFLLLILLWNRR
        AVLLFLLLILLWNRR
Subjt:  AVLLFLLLILLWNRR

KAG7037914.1 hypothetical protein SDJN02_01545, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-5299.13Show/hide
Query:  MSWAEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQSQEMALDFKLFLLALPFLLIFIANSLLVSGSVASTAMRTKNRSAQEAEKTSPWGA
        MSWAEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQSQEMA DFKLFLLALPFLLIFIANSLLVSGSVASTAMRTKNRSAQEAEKTSPWGA
Subjt:  MSWAEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQSQEMALDFKLFLLALPFLLIFIANSLLVSGSVASTAMRTKNRSAQEAEKTSPWGA

Query:  AVLLFLLLILLWNRR
        AVLLFLLLILLWNRR
Subjt:  AVLLFLLLILLWNRR

KGN60038.1 hypothetical protein Csa_001668 [Cucumis sativus]2.8e-4180.7Show/hide
Query:  MSWAEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQSQEMALDFKLFLLALPFLLIFIANSLLVSGSVASTAMRTKNRSAQEAEKTSPWGA
        MSW  EER PEWKYGW ER ++SMS PPMPLLAFLGVV+LLLSLQSQ+M LDFKL LLALPFL+IF+ANS+ VSG+V S +MRTK+RSAQEAE+TSPWGA
Subjt:  MSWAEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQSQEMALDFKLFLLALPFLLIFIANSLLVSGSVASTAMRTKNRSAQEAEKTSPWGA

Query:  AVLLFLLLILLWNR
        AVLLFLLLILLWNR
Subjt:  AVLLFLLLILLWNR

XP_022940699.1 uncharacterized protein LOC111446211 [Cucurbita moschata]7.2e-53100Show/hide
Query:  MSWAEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQSQEMALDFKLFLLALPFLLIFIANSLLVSGSVASTAMRTKNRSAQEAEKTSPWGA
        MSWAEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQSQEMALDFKLFLLALPFLLIFIANSLLVSGSVASTAMRTKNRSAQEAEKTSPWGA
Subjt:  MSWAEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQSQEMALDFKLFLLALPFLLIFIANSLLVSGSVASTAMRTKNRSAQEAEKTSPWGA

Query:  AVLLFLLLILLWNRR
        AVLLFLLLILLWNRR
Subjt:  AVLLFLLLILLWNRR

TrEMBL top hitse value%identityAlignment
A0A0A0LE80 Uncharacterized protein1.4e-4180.7Show/hide
Query:  MSWAEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQSQEMALDFKLFLLALPFLLIFIANSLLVSGSVASTAMRTKNRSAQEAEKTSPWGA
        MSW  EER PEWKYGW ER ++SMS PPMPLLAFLGVV+LLLSLQSQ+M LDFKL LLALPFL+IF+ANS+ VSG+V S +MRTK+RSAQEAE+TSPWGA
Subjt:  MSWAEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQSQEMALDFKLFLLALPFLLIFIANSLLVSGSVASTAMRTKNRSAQEAEKTSPWGA

Query:  AVLLFLLLILLWNR
        AVLLFLLLILLWNR
Subjt:  AVLLFLLLILLWNR

A0A2P5F7W0 Transmembrane protein1.3e-1547.11Show/hide
Query:  MSW-AEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQS--------QEMALDFKLFLLALPFLLIFIANSLLVSGSVASTAMRTKNRSAQE
        M W   E     WK GW ERT+AS+S PP+PL+A +G+V++LLS+ S        Q+  + FKLFLL LP LLIF+ANS+   GSV   + RTK   A  
Subjt:  MSW-AEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQS--------QEMALDFKLFLLALPFLLIFIANSLLVSGSVASTAMRTKNRSAQE

Query:  AE-KTSPWGAAVLLFLLLILL
        ++   SPWG A+LL LL++L+
Subjt:  AE-KTSPWGAAVLLFLLLILL

A0A5A7V8G0 Uncharacterized protein6.2e-4282.46Show/hide
Query:  MSWAEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQSQEMALDFKLFLLALPFLLIFIANSLLVSGSVASTAMRTKNRSAQEAEKTSPWGA
        MSW  EER PEWKYGW ER +ASMS PPMPLLAFLGVV+LLLSLQSQ+M LDFKL LLALPFL+IF ANS+ VSG+V S AMRTK+RSAQEAE+TSPWGA
Subjt:  MSWAEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQSQEMALDFKLFLLALPFLLIFIANSLLVSGSVASTAMRTKNRSAQEAEKTSPWGA

Query:  AVLLFLLLILLWNR
        AVLLFLLLILLWNR
Subjt:  AVLLFLLLILLWNR

A0A5D3E6P1 Uncharacterized protein1.8e-4181.58Show/hide
Query:  MSWAEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQSQEMALDFKLFLLALPFLLIFIANSLLVSGSVASTAMRTKNRSAQEAEKTSPWGA
        MSW  EER PEWKYGW ER +ASMS PPMPLLAFLGVV+LLLSLQSQ+M LDFKL LLALPF +IF ANS+ VSG+V S AMRTK+RSAQEAE+TSPWGA
Subjt:  MSWAEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQSQEMALDFKLFLLALPFLLIFIANSLLVSGSVASTAMRTKNRSAQEAEKTSPWGA

Query:  AVLLFLLLILLWNR
        AVLLFLLLILLWNR
Subjt:  AVLLFLLLILLWNR

A0A6J1FL09 uncharacterized protein LOC1114462113.5e-53100Show/hide
Query:  MSWAEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQSQEMALDFKLFLLALPFLLIFIANSLLVSGSVASTAMRTKNRSAQEAEKTSPWGA
        MSWAEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQSQEMALDFKLFLLALPFLLIFIANSLLVSGSVASTAMRTKNRSAQEAEKTSPWGA
Subjt:  MSWAEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQSQEMALDFKLFLLALPFLLIFIANSLLVSGSVASTAMRTKNRSAQEAEKTSPWGA

Query:  AVLLFLLLILLWNRR
        AVLLFLLLILLWNRR
Subjt:  AVLLFLLLILLWNRR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G42146.1 unknown protein2.8e-1035.77Show/hide
Query:  MSW-AEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQS--------QEMALDFKLFLLALPFLLIFIANSLLVSGSV---ASTAMRTKNRS
        M W  +E R   WK GW E T+ + S PP+ LLA L ++ LLL L S        ++ A + KLF+L LP L +F+  SL     +   +S ++R     
Subjt:  MSW-AEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQS--------QEMALDFKLFLLALPFLLIFIANSLLVSGSV---ASTAMRTKNRS

Query:  AQEAEKTSPWGAAVLLFLLLILL
        +   E   PWG  ++L LLL+L+
Subjt:  AQEAEKTSPWGAAVLLFLLLILL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTGGGCAGAGGAAGAAAGAGTTCCAGAGTGGAAGTATGGATGGGCAGAGAGAACAATCGCTTCCATGTCTCCCCCGCCTATGCCTCTTCTCGCCTTCCTCGGCGT
CGTCCTTCTTTTGCTTTCGTTGCAGTCCCAGGAGATGGCACTCGACTTCAAGCTCTTCCTACTAGCTTTGCCATTTTTGCTCATCTTTATTGCAAATTCCCTTCTTGTGT
CTGGTTCGGTTGCGTCGACTGCCATGAGAACCAAGAACAGGTCAGCTCAGGAGGCCGAAAAGACCTCACCTTGGGGCGCAGCGGTGTTGCTGTTTCTGCTGCTGATATTG
CTGTGGAACCGCCGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTGGGCAGAGGAAGAAAGAGTTCCAGAGTGGAAGTATGGATGGGCAGAGAGAACAATCGCTTCCATGTCTCCCCCGCCTATGCCTCTTCTCGCCTTCCTCGGCGT
CGTCCTTCTTTTGCTTTCGTTGCAGTCCCAGGAGATGGCACTCGACTTCAAGCTCTTCCTACTAGCTTTGCCATTTTTGCTCATCTTTATTGCAAATTCCCTTCTTGTGT
CTGGTTCGGTTGCGTCGACTGCCATGAGAACCAAGAACAGGTCAGCTCAGGAGGCCGAAAAGACCTCACCTTGGGGCGCAGCGGTGTTGCTGTTTCTGCTGCTGATATTG
CTGTGGAACCGCCGTTAA
Protein sequenceShow/hide protein sequence
MSWAEEERVPEWKYGWAERTIASMSPPPMPLLAFLGVVLLLLSLQSQEMALDFKLFLLALPFLLIFIANSLLVSGSVASTAMRTKNRSAQEAEKTSPWGAAVLLFLLLIL
LWNRR