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CmoCh01G020370 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G020370
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionthaumatin-like protein 1
Genome locationCmo_Chr01:14276057..14277043
RNA-Seq ExpressionCmoCh01G020370
SyntenyCmoCh01G020370
Gene Ontology termsGO:0006952 - defense response (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608601.1 Thaumatin-like protein 1, partial [Cucurbita argyrosperma subsp. sororia]4.6e-22100Show/hide
Query:  QKSTETHNTNTPVINGGNGTMVYEGAAFDLSSASRTTLRHILGVVVATVAVLQMWQLF
        QKSTETHNTNTPVINGGNGTMVYEGAAFDLSSASRTTLRHILGVVVATVAVLQMWQLF
Subjt:  QKSTETHNTNTPVINGGNGTMVYEGAAFDLSSASRTTLRHILGVVVATVAVLQMWQLF

KAG7037919.1 hypothetical protein SDJN02_01550 [Cucurbita argyrosperma subsp. argyrosperma]4.6e-22100Show/hide
Query:  QKSTETHNTNTPVINGGNGTMVYEGAAFDLSSASRTTLRHILGVVVATVAVLQMWQLF
        QKSTETHNTNTPVINGGNGTMVYEGAAFDLSSASRTTLRHILGVVVATVAVLQMWQLF
Subjt:  QKSTETHNTNTPVINGGNGTMVYEGAAFDLSSASRTTLRHILGVVVATVAVLQMWQLF

XP_022940684.1 thaumatin-like protein 1 [Cucurbita moschata]4.6e-22100Show/hide
Query:  QKSTETHNTNTPVINGGNGTMVYEGAAFDLSSASRTTLRHILGVVVATVAVLQMWQLF
        QKSTETHNTNTPVINGGNGTMVYEGAAFDLSSASRTTLRHILGVVVATVAVLQMWQLF
Subjt:  QKSTETHNTNTPVINGGNGTMVYEGAAFDLSSASRTTLRHILGVVVATVAVLQMWQLF

XP_022981306.1 thaumatin-like protein 1 [Cucurbita maxima]1.7e-2198.28Show/hide
Query:  QKSTETHNTNTPVINGGNGTMVYEGAAFDLSSASRTTLRHILGVVVATVAVLQMWQLF
        QKSTETHNTNTPVINGGNGTMVYEGAAFDLSSASRTTLRHILGVVVA VAVLQMWQLF
Subjt:  QKSTETHNTNTPVINGGNGTMVYEGAAFDLSSASRTTLRHILGVVVATVAVLQMWQLF

XP_023523956.1 thaumatin-like protein 1 [Cucurbita pepo subsp. pepo]7.3e-2093.44Show/hide
Query:  QKSTETHNTNTPVI---NGGNGTMVYEGAAFDLSSASRTTLRHILGVVVATVAVLQMWQLF
        QKSTETHN NTPVI   NGGNGTMVYEGAAFDLSSASRTTLRHILGVVVATVAVLQMWQLF
Subjt:  QKSTETHNTNTPVI---NGGNGTMVYEGAAFDLSSASRTTLRHILGVVVATVAVLQMWQLF

TrEMBL top hitse value%identityAlignment
A0A0A0LE84 Uncharacterized protein4.0e-1681.03Show/hide
Query:  QKSTETHNTNTPVINGGNGTMVYEGAAFDLSSASRTTLRHILGVVVATVAVLQMWQLF
        QKST+ HNTNTP INGGNGTMVYEGAA+D S ASRTTLR ILGVVVATV +LQ+ QLF
Subjt:  QKSTETHNTNTPVINGGNGTMVYEGAAFDLSSASRTTLRHILGVVVATVAVLQMWQLF

A0A1S3CRC9 thaumatin-like protein 11.8e-1681.03Show/hide
Query:  QKSTETHNTNTPVINGGNGTMVYEGAAFDLSSASRTTLRHILGVVVATVAVLQMWQLF
        QKST+ HNTNTP  NGGNGTMVYEGA +DLS ASRT+LRHILGVVVATVA+LQ+ QLF
Subjt:  QKSTETHNTNTPVINGGNGTMVYEGAAFDLSSASRTTLRHILGVVVATVAVLQMWQLF

A0A5A7V4W4 Thaumatin-like protein 11.8e-1681.03Show/hide
Query:  QKSTETHNTNTPVINGGNGTMVYEGAAFDLSSASRTTLRHILGVVVATVAVLQMWQLF
        QKST+ HNTNTP  NGGNGTMVYEGA +DLS ASRT+LRHILGVVVATVA+LQ+ QLF
Subjt:  QKSTETHNTNTPVINGGNGTMVYEGAAFDLSSASRTTLRHILGVVVATVAVLQMWQLF

A0A6J1FKZ2 thaumatin-like protein 12.2e-22100Show/hide
Query:  QKSTETHNTNTPVINGGNGTMVYEGAAFDLSSASRTTLRHILGVVVATVAVLQMWQLF
        QKSTETHNTNTPVINGGNGTMVYEGAAFDLSSASRTTLRHILGVVVATVAVLQMWQLF
Subjt:  QKSTETHNTNTPVINGGNGTMVYEGAAFDLSSASRTTLRHILGVVVATVAVLQMWQLF

A0A6J1IW67 thaumatin-like protein 18.4e-2298.28Show/hide
Query:  QKSTETHNTNTPVINGGNGTMVYEGAAFDLSSASRTTLRHILGVVVATVAVLQMWQLF
        QKSTETHNTNTPVINGGNGTMVYEGAAFDLSSASRTTLRHILGVVVA VAVLQMWQLF
Subjt:  QKSTETHNTNTPVINGGNGTMVYEGAAFDLSSASRTTLRHILGVVVATVAVLQMWQLF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCTCGGTGGATCATGGGACGGCTACGCCACCAACGGCCTTGCCGGGAAATCGGCGAGTCGTCAGAAATCAACGGAAACTCACAACACAAACACGCCAGTGATCAA
TGGCGGCAATGGCACAATGGTTTACGAAGGGGCTGCGTTTGATCTAAGCAGCGCGTCGAGAACAACGCTCCGCCATATTCTAGGCGTAGTTGTTGCCACGGTGGCAGTCC
TTCAAATGTGGCAACTGTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCTCGGTGGATCATGGGACGGCTACGCCACCAACGGCCTTGCCGGGAAATCGGCGAGTCGTCAGAAATCAACGGAAACTCACAACACAAACACGCCAGTGATCAA
TGGCGGCAATGGCACAATGGTTTACGAAGGGGCTGCGTTTGATCTAAGCAGCGCGTCGAGAACAACGCTCCGCCATATTCTAGGCGTAGTTGTTGCCACGGTGGCAGTCC
TTCAAATGTGGCAACTGTTTTGACCGACCGATCCTCGCTATATGTCATAGGTAGTAGTAGTAGCAGACCCATTACCTTTTACAGAACTTTTCAGCCCATTTTTGCCTAGA
AGGAATCGTGTCACGTGTGGAGCCCACCACGGTTTTCAGTTTCGTTCGTTAAAAGGCATGATGGGCCAAGTGTGTGGGCCGGGCCCATATTTAGGGGACCCAAATGATGT
GGATGCGAGTCATGAATGAAAAGGCTCATCCGCATACGTTAAATGAGGGAAGCCGCCAACCAATCCACCACCACCTTCAATGGCGAAAGCTGACATAGAAGAAGATTTTT
AATATTTTTTAGGAATTCTTTCCAAGGATTATTTTACTTCAATTCTTTATAATTAGATGAAGAAGAAACAAAATAATGATATTTGGAGGATTCATTTATTTGTAATGGGG
AACAATTCAATATTGTTAAATTTAATTCTTCTCCTCATGATTAAATTGTTTGATTACATCTGTATCACATTATAATAGTGTGCTATAAAAGAAATGAATCCTATATAACA
G
Protein sequenceShow/hide protein sequence
MSLGGSWDGYATNGLAGKSASRQKSTETHNTNTPVINGGNGTMVYEGAAFDLSSASRTTLRHILGVVVATVAVLQMWQLF