; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh01G020450 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G020450
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionribonuclease P protein subunit p25-like protein
Genome locationCmo_Chr01:14319916..14323597
RNA-Seq ExpressionCmoCh01G020450
SyntenyCmoCh01G020450
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR002775 - DNA/RNA-binding protein Alba-like
IPR036882 - Alba-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608609.1 Ribonuclease P protein subunit p25-like protein, partial [Cucurbita argyrosperma subsp. sororia]8.1e-13797.72Show/hide
Query:  MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLE
        MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLE
Subjt:  MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLE

Query:  TTRHVSMIVITLSKKELNTSSVGYQPPLPAELVKT---YDYEGEGSPHDQGPGRGRERDRNGRGRARGRGPPGNGYVTNEYDDGDWDRNRGGNVRGRGRG
        TTRHVSMIVITLSKKELNTSSVGYQPPLPAELVKT   YDYEGEGSPHDQGPGRGRER RNGRGRARGRGPPGNGYVTNEYDDGDWDRNRGGNVRGRGRG
Subjt:  TTRHVSMIVITLSKKELNTSSVGYQPPLPAELVKT---YDYEGEGSPHDQGPGRGRERDRNGRGRARGRGPPGNGYVTNEYDDGDWDRNRGGNVRGRGRG

Query:  RSGGNFRDRGRGGYNGPQYDFQQDGGYNQDLPAQGRGRGRGRGGFRGRGRGFRTNGGPIQAAA
        RSGGNFR RGRGGYNGPQYD QQDGGYNQDLPAQGRGRGRGRGGFRGRGRGFRTNGGPIQAAA
Subjt:  RSGGNFRDRGRGGYNGPQYDFQQDGGYNQDLPAQGRGRGRGRGGFRGRGRGFRTNGGPIQAAA

XP_022941062.1 ribonuclease P protein subunit p25-like protein [Cucurbita moschata]9.3e-141100Show/hide
Query:  MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLE
        MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLE
Subjt:  MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLE

Query:  TTRHVSMIVITLSKKELNTSSVGYQPPLPAELVKTYDYEGEGSPHDQGPGRGRERDRNGRGRARGRGPPGNGYVTNEYDDGDWDRNRGGNVRGRGRGRSG
        TTRHVSMIVITLSKKELNTSSVGYQPPLPAELVKTYDYEGEGSPHDQGPGRGRERDRNGRGRARGRGPPGNGYVTNEYDDGDWDRNRGGNVRGRGRGRSG
Subjt:  TTRHVSMIVITLSKKELNTSSVGYQPPLPAELVKTYDYEGEGSPHDQGPGRGRERDRNGRGRARGRGPPGNGYVTNEYDDGDWDRNRGGNVRGRGRGRSG

Query:  GNFRDRGRGGYNGPQYDFQQDGGYNQDLPAQGRGRGRGRGGFRGRGRGFRTNGGPIQAAA
        GNFRDRGRGGYNGPQYDFQQDGGYNQDLPAQGRGRGRGRGGFRGRGRGFRTNGGPIQAAA
Subjt:  GNFRDRGRGGYNGPQYDFQQDGGYNQDLPAQGRGRGRGRGGFRGRGRGFRTNGGPIQAAA

XP_022982024.1 ribonuclease P protein subunit p25-like protein [Cucurbita maxima]2.0e-13596.96Show/hide
Query:  MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLE
        MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLE
Subjt:  MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLE

Query:  TTRHVSMIVITLSKKELNTSSVGYQPPLPAELVKT---YDYEGEGSPHDQGPGRGRERDRNGRGRARGRGPPGNGYVTNEYDDGDWDRNRGGNVRGRGRG
        TTRHVSMIVITLSKKELNTSSVGYQPPLPAELVKT   YDYEGEGSPHD GPGRGRER RNGRGRARGRGPPGNGYVTNEYDDGDWDRNRGGNVRGRGRG
Subjt:  TTRHVSMIVITLSKKELNTSSVGYQPPLPAELVKT---YDYEGEGSPHDQGPGRGRERDRNGRGRARGRGPPGNGYVTNEYDDGDWDRNRGGNVRGRGRG

Query:  RSGGNFRDRGRGGYNGPQYDFQQDGGYNQDLPAQGRGRGRGRGGFRGRGRGFRTNGGPIQAAA
        RSGGNFR RGRGGYNGPQYD QQDGGYNQDLPAQGRGRGRGRGGFRGRGRGFRT+GGPIQAAA
Subjt:  RSGGNFRDRGRGGYNGPQYDFQQDGGYNQDLPAQGRGRGRGRGGFRGRGRGFRTNGGPIQAAA

XP_023525730.1 ribonuclease P protein subunit p25-like protein [Cucurbita pepo subsp. pepo]8.1e-13797.72Show/hide
Query:  MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLE
        MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLE
Subjt:  MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLE

Query:  TTRHVSMIVITLSKKELNTSSVGYQPPLPAELVKT---YDYEGEGSPHDQGPGRGRERDRNGRGRARGRGPPGNGYVTNEYDDGDWDRNRGGNVRGRGRG
        TTRHVSMIVITLSKKELNTSSVGYQPPLPAELVKT   YDYEGEGSPHDQGPGRGRER RNGRGRARGRGPPGNGYVTNEYDDGDWDRNRGGNVRGRGRG
Subjt:  TTRHVSMIVITLSKKELNTSSVGYQPPLPAELVKT---YDYEGEGSPHDQGPGRGRERDRNGRGRARGRGPPGNGYVTNEYDDGDWDRNRGGNVRGRGRG

Query:  RSGGNFRDRGRGGYNGPQYDFQQDGGYNQDLPAQGRGRGRGRGGFRGRGRGFRTNGGPIQAAA
        RSGGNFR RGRGGYNGPQYD QQDGGYNQDLPAQGRGRGRGRGGFRGRGRGFRTNGGPIQAAA
Subjt:  RSGGNFRDRGRGGYNGPQYDFQQDGGYNQDLPAQGRGRGRGRGGFRGRGRGFRTNGGPIQAAA

XP_038900199.1 ribonuclease P protein subunit p25-like protein isoform X1 [Benincasa hispida]2.7e-13294.68Show/hide
Query:  MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLE
        MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLE
Subjt:  MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLE

Query:  TTRHVSMIVITLSKKELNTSSVGYQPPLPAELVKT---YDYEGEGSPHDQGPGRGRERDRNGRGRARGRGPPGNGYVTNEYDDGDWDRNRGGNVRGRGRG
        TTRHVSMIVITLSKKELN SSVGYQPPLPAELVKT   YDYEGEGSPHDQGPGRGR R RNGRGR+RGRGPPGNG+V NEYDDGDWDRNRGGN RGRGRG
Subjt:  TTRHVSMIVITLSKKELNTSSVGYQPPLPAELVKT---YDYEGEGSPHDQGPGRGRERDRNGRGRARGRGPPGNGYVTNEYDDGDWDRNRGGNVRGRGRG

Query:  RSGGNFRDRGRGGYNGPQYDFQQDGGYNQDLPAQGRGRGRGRGGFRGRGRGFRTNGGPIQAAA
        RSGGNFR RGRGGYNGPQ+D QQDGGYNQDLPAQGRGRGRGRGG+RGRGRGFRTNGGPIQAAA
Subjt:  RSGGNFRDRGRGGYNGPQYDFQQDGGYNQDLPAQGRGRGRGRGGFRGRGRGFRTNGGPIQAAA

TrEMBL top hitse value%identityAlignment
A0A0A0LJ75 Alba domain-containing protein3.2e-13194.32Show/hide
Query:  MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLE
        MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLE
Subjt:  MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLE

Query:  TTRHVSMIVITLSKKELNTSSVGYQPPLPAELVKT---YDYEGEGSPHDQGPGRGRERDRNGRGRARGRGPPGNGYVTNEYDDGDWDRNRGGNVRGRGRG
        TTRHVSMIVITLSKKELN SSVGYQPPLPAELVKT   YDYEGEGSPHDQGPGRGR R RNGRGR+RGRGPPGNG+V NEYDDGDWDRNRGGN RGRGRG
Subjt:  TTRHVSMIVITLSKKELNTSSVGYQPPLPAELVKT---YDYEGEGSPHDQGPGRGRERDRNGRGRARGRGPPGNGYVTNEYDDGDWDRNRGGNVRGRGRG

Query:  RSGGNFRDRGRGGYNGPQYDFQQDGGYNQD-LPAQGRGRGRGRGGFRGRGRGFRTNGGPIQAAA
        RSGGNFR RGRGGYNGPQ+D QQDGGYNQD LPAQGRGRGRGRGG+RGRGRGFRTNGGPIQAAA
Subjt:  RSGGNFRDRGRGGYNGPQYDFQQDGGYNQD-LPAQGRGRGRGRGGFRGRGRGFRTNGGPIQAAA

A0A6J1FSH3 ribonuclease P protein subunit p25-like protein4.5e-141100Show/hide
Query:  MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLE
        MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLE
Subjt:  MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLE

Query:  TTRHVSMIVITLSKKELNTSSVGYQPPLPAELVKTYDYEGEGSPHDQGPGRGRERDRNGRGRARGRGPPGNGYVTNEYDDGDWDRNRGGNVRGRGRGRSG
        TTRHVSMIVITLSKKELNTSSVGYQPPLPAELVKTYDYEGEGSPHDQGPGRGRERDRNGRGRARGRGPPGNGYVTNEYDDGDWDRNRGGNVRGRGRGRSG
Subjt:  TTRHVSMIVITLSKKELNTSSVGYQPPLPAELVKTYDYEGEGSPHDQGPGRGRERDRNGRGRARGRGPPGNGYVTNEYDDGDWDRNRGGNVRGRGRGRSG

Query:  GNFRDRGRGGYNGPQYDFQQDGGYNQDLPAQGRGRGRGRGGFRGRGRGFRTNGGPIQAAA
        GNFRDRGRGGYNGPQYDFQQDGGYNQDLPAQGRGRGRGRGGFRGRGRGFRTNGGPIQAAA
Subjt:  GNFRDRGRGGYNGPQYDFQQDGGYNQDLPAQGRGRGRGRGGFRGRGRGFRTNGGPIQAAA

A0A6J1IFA1 ribonuclease P protein subunit p25-like protein isoform X16.1e-13093.16Show/hide
Query:  MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLE
        MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLE
Subjt:  MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLE

Query:  TTRHVSMIVITLSKKELNTSSVGYQPPLPAELVKT---YDYEGEGSPHDQGPGRGRERDRNGRGRARGRGPPGNGYVTNEYDDGDWDRNRGGNVRGRGRG
        TTRHVSMIVITLSKKELNTSSVGYQPPLPAELVKT   YDYEGEGSPHDQGPGRGR R R+GRGR+RGRGPPGNG+V NEYDDGDWDRNRGGN RGR RG
Subjt:  TTRHVSMIVITLSKKELNTSSVGYQPPLPAELVKT---YDYEGEGSPHDQGPGRGRERDRNGRGRARGRGPPGNGYVTNEYDDGDWDRNRGGNVRGRGRG

Query:  RSGGNFRDRGRGGYNGPQYDFQQDGGYNQDLPAQGRGRGRGRGGFRGRGRGFRTNGGPIQAAA
        R GGNFR RGRGGYNGPQ+D QQDGGYNQD P QGRGRGRGRGG+RGRGRGFRTNGGPIQAAA
Subjt:  RSGGNFRDRGRGGYNGPQYDFQQDGGYNQDLPAQGRGRGRGRGGFRGRGRGFRTNGGPIQAAA

A0A6J1ILQ2 ribonuclease P protein subunit p25-like protein isoform X26.1e-13093.16Show/hide
Query:  MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLE
        MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLE
Subjt:  MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLE

Query:  TTRHVSMIVITLSKKELNTSSVGYQPPLPAELVKT---YDYEGEGSPHDQGPGRGRERDRNGRGRARGRGPPGNGYVTNEYDDGDWDRNRGGNVRGRGRG
        TTRHVSMIVITLSKKELNTSSVGYQPPLPAELVKT   YDYEGEGSPHDQGPGRGR R R+GRGR+RGRGPPGNG+V NEYDDGDWDRNRGGN RGR RG
Subjt:  TTRHVSMIVITLSKKELNTSSVGYQPPLPAELVKT---YDYEGEGSPHDQGPGRGRERDRNGRGRARGRGPPGNGYVTNEYDDGDWDRNRGGNVRGRGRG

Query:  RSGGNFRDRGRGGYNGPQYDFQQDGGYNQDLPAQGRGRGRGRGGFRGRGRGFRTNGGPIQAAA
        R GGNFR RGRGGYNGPQ+D QQDGGYNQD P QGRGRGRGRGG+RGRGRGFRTNGGPIQAAA
Subjt:  RSGGNFRDRGRGGYNGPQYDFQQDGGYNQDLPAQGRGRGRGRGGFRGRGRGFRTNGGPIQAAA

A0A6J1J1F5 ribonuclease P protein subunit p25-like protein9.7e-13696.96Show/hide
Query:  MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLE
        MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLE
Subjt:  MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLE

Query:  TTRHVSMIVITLSKKELNTSSVGYQPPLPAELVKT---YDYEGEGSPHDQGPGRGRERDRNGRGRARGRGPPGNGYVTNEYDDGDWDRNRGGNVRGRGRG
        TTRHVSMIVITLSKKELNTSSVGYQPPLPAELVKT   YDYEGEGSPHD GPGRGRER RNGRGRARGRGPPGNGYVTNEYDDGDWDRNRGGNVRGRGRG
Subjt:  TTRHVSMIVITLSKKELNTSSVGYQPPLPAELVKT---YDYEGEGSPHDQGPGRGRERDRNGRGRARGRGPPGNGYVTNEYDDGDWDRNRGGNVRGRGRG

Query:  RSGGNFRDRGRGGYNGPQYDFQQDGGYNQDLPAQGRGRGRGRGGFRGRGRGFRTNGGPIQAAA
        RSGGNFR RGRGGYNGPQYD QQDGGYNQDLPAQGRGRGRGRGGFRGRGRGFRT+GGPIQAAA
Subjt:  RSGGNFRDRGRGGYNGPQYDFQQDGGYNQDLPAQGRGRGRGRGGFRGRGRGFRTNGGPIQAAA

SwissProt top hitse value%identityAlignment
Q2KIR4 Ribonuclease P protein subunit p25-like protein4.5e-1331.85Show/hide
Query:  PRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPL--EEGLLPLETTRHVSM
        P  + P D  E+R+ +  ++RN +  A+  L+   +  +VF   GRA  K V+  E++KRR+ GL+Q T +      D+W P   + GL PL    HV  
Subjt:  PRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPL--EEGLLPLETTRHVSM

Query:  IVITLSKKELNTSSVGYQPPLPAELVKTYDYEGEGSPHDQGPGRGRERDRNGRGRAR
        + + LS+  L+ +  GYQPP              G+P D GP          R RAR
Subjt:  IVITLSKKELNTSSVGYQPPLPAELVKTYDYEGEGSPHDQGPGRGRERDRNGRGRAR

Q5PPN2 Ribonuclease P protein subunit p251.0e-1233.33Show/hide
Query:  IRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLP----------LETTRHVSMIVI
        +R+    ++RN + +A   + +  +  IVF   GRA  KTVT  E++KRR+ GLHQ T +    + + W+ L  G  P          L   ++V  + I
Subjt:  IRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLP----------LETTRHVSMIVI

Query:  TLSKKELNTSSVGYQPP
         LSK  L+   +GYQPP
Subjt:  TLSKKELNTSSVGYQPP

Q8N5L8 Ribonuclease P protein subunit p25-like protein3.7e-1535.83Show/hide
Query:  PRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPL--EEGLLPLETTRHVSM
        P  + P D  E+R+    ++RN +  A+  L+   +  +VF   GRA  K V+  E++KRR+ GLHQ T +      D+W P   + GL PL   RHV  
Subjt:  PRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPL--EEGLLPLETTRHVSM

Query:  IVITLSKKELNTSSVGYQPP
        + + LS+  L+ +  GYQPP
Subjt:  IVITLSKKELNTSSVGYQPP

Q91WE3 Ribonuclease P protein subunit p251.0e-1233.33Show/hide
Query:  IRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLP----------LETTRHVSMIVI
        +R+    ++RN + +A   + +  +  IVF   GRA  KTVT  E++KRR+ GLHQ T +    + + W+ L  G  P          L   ++V  + I
Subjt:  IRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLP----------LETTRHVSMIVI

Query:  TLSKKELNTSSVGYQPP
         LSK  L+   +GYQPP
Subjt:  TLSKKELNTSSVGYQPP

Q99JH1 Ribonuclease P protein subunit p25-like protein1.3e-1534.56Show/hide
Query:  MDRYHR-------VEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPL-
        M++Y R          P  + P D  E+R+    ++RN +  A+  L+   +  +VF   GRA  K V+  E++KRR+ GLHQ T +      D+W P  
Subjt:  MDRYHR-------VEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPL-

Query:  -EEGLLPLETTRHVSMIVITLSKKELNTSSVGYQPP
         + GL PL   RHV  + + LS+  L+ S  GYQPP
Subjt:  -EEGLLPLETTRHVSMIVITLSKKELNTSSVGYQPP

Arabidopsis top hitse value%identityAlignment
AT1G20220.1 Alba DNA/RNA-binding protein3.7e-7961.44Show/hide
Query:  MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLE
        MD+Y RVEKP+A+TPI ENEIRITS GR RNYITYAM LLQE  SNE++FKAMGRAINK+VTIVELIKRRI GLHQ TSIGSTDITDTWEP EEGL  +E
Subjt:  MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLE

Query:  TTRHVSMIVITLSKKELNTSSVGYQPPLPAELVK---TYDYEG-EGSPHDQG-----PGRGRERDRNGRGR----------ARGRGPPGNGYVTNEYDDG
        TTRHVSMI ITLSK++LNTSSVGYQ P+P E+VK     DYEG +GSP  +G      GRGR R R GRG            RGRG  GNGYV NEYDDG
Subjt:  TTRHVSMIVITLSKKELNTSSVGYQPPLPAELVK---TYDYEG-EGSPHDQG-----PGRGRERDRNGRGR----------ARGRGPPGNGYVTNEYDDG

Query:  DWDRNRGGN--------------------VRGRGRGRSGGNFRDRGRGGYNG---PQYDFQQDG---GYN----------QDLPAQGRGRGRGRGGFRGR
           R RGG                      RGRGRGR GG    RGRGGYNG   P Y+ QQDG   GYN             P QGRGRGRGRGG RGR
Subjt:  DWDRNRGGN--------------------VRGRGRGRSGGNFRDRGRGGYNG---PQYDFQQDG---GYN----------QDLPAQGRGRGRGRGGFRGR

Query:  GRG----FRTNGGPIQAAA
        G G     R+NG PIQAAA
Subjt:  GRG----FRTNGGPIQAAA

AT1G76010.1 Alba DNA/RNA-binding protein7.2e-8370.19Show/hide
Query:  MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLE
        MD+Y RV KP+A+TPID NEIRITSQGR RNYITYAMTLLQ+KGS E+VFKAMGRAINKTVTIVELIKRRI  LHQNTSIGSTDITDTWEP EEGLLPLE
Subjt:  MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLE

Query:  TTRHVSMIVITLSKKELNTSSVGYQPPLPAELVK---TYDYEG-EGSPHDQGPGRGRERDRNGRGRARGRGPPGNGYVTNEYDDGDWDRNRG-GNVRGRG
        TTRHVSMI ITLSK ELNTSSVGYQ P+P ELVK     DYEG EGSP  +G GRGR     GRGR RGRG  GN YV  E++DG W+R +  G  RGRG
Subjt:  TTRHVSMIVITLSKKELNTSSVGYQPPLPAELVK---TYDYEG-EGSPHDQGPGRGRERDRNGRGRARGRGPPGNGYVTNEYDDGDWDRNRG-GNVRGRG

Query:  RGRSGGNFRDRGRGGYNGP--QYDFQQDGGYNQDLPAQGRG---RG------RGRGGFRG-RGRG
        RGRS    R RGRGGYNGP  +YD  QDGGY  D P + RG   RG      +GRGG+ G +GRG
Subjt:  RGRSGGNFRDRGRGGYNGP--QYDFQQDGGYNQDLPAQGRG---RG------RGRGGFRG-RGRG

AT3G07030.1 Alba DNA/RNA-binding protein4.3e-3542.81Show/hide
Query:  MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLE
        MDRY RV KP+ E+PI+ENEIRITS+G +RNYI+YA +LLQEK   +IV KAMG+AI+KTV I E++K +I GLHQ+ +I S  ITD WEP EEGL P+E
Subjt:  MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLE

Query:  TTRHVSMIVITLSKKELNTSSVGYQPPLPAELVK----------------TYDYEGE-------GSPHDQGPGRGRERDRNGRGRARGRGPPGNGYVTNE
         TRHVSMI ITLS  ELN  S GYQ P  ++  K                 Y  EGE       G   D    +G  +++  +G  +         +   
Subjt:  TTRHVSMIVITLSKKELNTSSVGYQPPLPAELVK----------------TYDYEGE-------GSPHDQGPGRGRERDRNGRGRARGRGPPGNGYVTNE

Query:  YDDGDWDRNRGGNVRGRGRGRSGGNFRDRGRGGYNGPQYDFQQDGGYNQDL-PAQGRGRGRGRGGFRGRGRGFRTNGG
         +  D        V GRG G  GG  RD G GG     Y  +++ GY +      G GR  G GG R  G G   N G
Subjt:  YDDGDWDRNRGGNVRGRGRGRSGGNFRDRGRGGYNGPQYDFQQDGGYNQDL-PAQGRGRGRGRGGFRGRGRGFRTNGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCGGTACCACAGAGTTGAGAAGCCAAGGGCTGAGACTCCAATTGACGAGAATGAGATTCGGATTACAAGCCAGGGAAGGATGCGCAACTATATCACATATGCCAT
GACCCTACTTCAGGAAAAGGGTTCCAATGAAATTGTTTTCAAGGCTATGGGAAGGGCTATAAACAAGACTGTGACCATCGTGGAACTAATCAAGAGGCGAATTGTAGGTC
TTCATCAGAATACCTCAATTGGCTCCACGGACATCACTGATACATGGGAGCCCTTGGAGGAAGGCCTTCTTCCATTGGAAACAACAAGGCATGTCTCGATGATTGTGATA
ACACTTTCAAAGAAAGAATTAAATACATCTTCTGTGGGGTACCAGCCTCCACTTCCTGCTGAGCTGGTGAAAACTTACGACTACGAGGGAGAAGGTTCACCTCATGATCA
GGGTCCAGGACGAGGTAGAGAACGGGACCGTAATGGCAGAGGAAGAGCCCGGGGTAGAGGACCCCCAGGCAATGGCTATGTGACAAATGAATATGATGATGGAGATTGGG
ACCGTAATAGGGGCGGAAATGTAAGAGGGAGGGGTCGAGGGAGGAGTGGTGGTAATTTCCGTGACCGTGGAAGAGGAGGATACAATGGTCCTCAGTATGATTTCCAGCAA
GATGGAGGATACAACCAAGACTTACCAGCTCAAGGCCGTGGGCGTGGACGTGGAAGGGGTGGTTTTCGTGGAAGGGGCCGTGGTTTCAGGACTAATGGAGGACCGATCCA
AGCTGCCGCATGA
mRNA sequenceShow/hide mRNA sequence
AAGTAGTCGGTTAGGGTAGTTTTCGCAATAGTGCCGCTACTATATAAAGGGCGAAACACCAGTGCTGGCGATTTAGGGCGTAACAGAAGAAACAAGCCGTAGAAGAGGGC
TCTCGTTTGTGGAGCGGATAATCCTACTTTCAATCGCTGTAGTCCTCAGATCGAACCTCATAGCTTCAAGTATGCTTCATTTTGCTTGTGTTTGGAGACGACTTTCATCG
CCCTCTGCACTTTCTCTTTCGTTTTCTGTATTTTACTTCTCTTTCTGATGGATCGGTACCACAGAGTTGAGAAGCCAAGGGCTGAGACTCCAATTGACGAGAATGAGATT
CGGATTACAAGCCAGGGAAGGATGCGCAACTATATCACATATGCCATGACCCTACTTCAGGAAAAGGGTTCCAATGAAATTGTTTTCAAGGCTATGGGAAGGGCTATAAA
CAAGACTGTGACCATCGTGGAACTAATCAAGAGGCGAATTGTAGGTCTTCATCAGAATACCTCAATTGGCTCCACGGACATCACTGATACATGGGAGCCCTTGGAGGAAG
GCCTTCTTCCATTGGAAACAACAAGGCATGTCTCGATGATTGTGATAACACTTTCAAAGAAAGAATTAAATACATCTTCTGTGGGGTACCAGCCTCCACTTCCTGCTGAG
CTGGTGAAAACTTACGACTACGAGGGAGAAGGTTCACCTCATGATCAGGGTCCAGGACGAGGTAGAGAACGGGACCGTAATGGCAGAGGAAGAGCCCGGGGTAGAGGACC
CCCAGGCAATGGCTATGTGACAAATGAATATGATGATGGAGATTGGGACCGTAATAGGGGCGGAAATGTAAGAGGGAGGGGTCGAGGGAGGAGTGGTGGTAATTTCCGTG
ACCGTGGAAGAGGAGGATACAATGGTCCTCAGTATGATTTCCAGCAAGATGGAGGATACAACCAAGACTTACCAGCTCAAGGCCGTGGGCGTGGACGTGGAAGGGGTGGT
TTTCGTGGAAGGGGCCGTGGTTTCAGGACTAATGGAGGACCGATCCAAGCTGCCGCATGAGGTGGTTAAAGGTTAAAATCTTAATTATATGCAATATTATCATTAGGATT
CTCTCTTCTTTTAGTTGGTAGTTGCAAGGGACAACTATATTATAACAGAGTAGGAATTTGACTTCTTTTATTTTTGGCCTTTGGATTGGTAGTTAGATGGAAGAAGTGTT
TGAAAGAGCCGCCATGTGAGGGTGGCGACTCGTTTTCTTGTAGACTTAGGTGAGCTGCTGCTTTGACGTTTGTATTTTAGTATTTTTAAAAAAAGAAACTCTTGGCCGCC
GGACACACTGTATCATTCTTTTATTTGAGTTCTTAGGATATTCTTGTCTTTCGCCTCTCTCCTCCTCTCCTTTTCGTTACTTGGTCACATTTTGAGTTCTCTGTTACAGT
TTCTTTTTTCACCTCTGATAATATCCCGACCACGGCCACAAATGTCGTTCGCTGTTTTTTAATGTATTAATTTCAATGCACTCGTTTCTATCAATTTCTAAGTCTACTCT
GTTTTTTAATGTAATTAAATAAATATTGTTTTTTTAATAAAAGAAATGTTT
Protein sequenceShow/hide protein sequence
MDRYHRVEKPRAETPIDENEIRITSQGRMRNYITYAMTLLQEKGSNEIVFKAMGRAINKTVTIVELIKRRIVGLHQNTSIGSTDITDTWEPLEEGLLPLETTRHVSMIVI
TLSKKELNTSSVGYQPPLPAELVKTYDYEGEGSPHDQGPGRGRERDRNGRGRARGRGPPGNGYVTNEYDDGDWDRNRGGNVRGRGRGRSGGNFRDRGRGGYNGPQYDFQQ
DGGYNQDLPAQGRGRGRGRGGFRGRGRGFRTNGGPIQAAA