; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh01G020490 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh01G020490
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionLYR motif-containing protein 2
Genome locationCmo_Chr01:14331056..14334185
RNA-Seq ExpressionCmoCh01G020490
SyntenyCmoCh01G020490
Gene Ontology termsNA
InterPro domainsIPR008011 - Complex 1 LYR protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608613.1 hypothetical protein SDJN03_01955, partial [Cucurbita argyrosperma subsp. sororia]8.4e-3298.73Show/hide
Query:  MVLSLDLQEFILRARVLKLYRHALRTAQKAPVHAREELRHTIRQEMENNRGCNERQKVRFLLSEGIERLKRLEEMLDMQ
        MVLSLDLQEFILRARVLKLYRHALRTAQKAPVHAREELRHTIRQEMENNRGCNER+KVRFLLSEGIERLKRLEEMLDMQ
Subjt:  MVLSLDLQEFILRARVLKLYRHALRTAQKAPVHAREELRHTIRQEMENNRGCNERQKVRFLLSEGIERLKRLEEMLDMQ
KAG7037930.1 hypothetical protein SDJN02_01562, partial [Cucurbita argyrosperma subsp. argyrosperma]8.4e-3298.73Show/hide
Query:  MVLSLDLQEFILRARVLKLYRHALRTAQKAPVHAREELRHTIRQEMENNRGCNERQKVRFLLSEGIERLKRLEEMLDMQ
        MVLSLDLQEFILRARVLKLYRHALRTAQKAPVHAREELRHTIRQEMENNRGCNER+KVRFLLSEGIERLKRLEEMLDMQ
Subjt:  MVLSLDLQEFILRARVLKLYRHALRTAQKAPVHAREELRHTIRQEMENNRGCNERQKVRFLLSEGIERLKRLEEMLDMQ
XP_022941069.1 uncharacterized protein LOC111446466 [Cucurbita moschata]9.0e-34100Show/hide
Query:  MVLSLDLQEFILRARVLKLYRHALRTAQKAPVHAREELRHTIRQEMENNRGCNERQKVRFLLSEGIERLKRLEEMLDMQGN
        MVLSLDLQEFILRARVLKLYRHALRTAQKAPVHAREELRHTIRQEMENNRGCNERQKVRFLLSEGIERLKRLEEMLDMQGN
Subjt:  MVLSLDLQEFILRARVLKLYRHALRTAQKAPVHAREELRHTIRQEMENNRGCNERQKVRFLLSEGIERLKRLEEMLDMQGN
XP_022981971.1 uncharacterized protein LOC111480962 [Cucurbita maxima]2.7e-3095.06Show/hide
Query:  MVLSLDLQEFILRARVLKLYRHALRTAQKAPVHAREELRHTIRQEMENNRGCNERQKVRFLLSEGIERLKRLEEMLDMQGN
        MVLSLDLQEFILRARVLKLYR ALR AQKAPVHAREELR  IRQEMENNRGCNERQKVRFLLSEGIERLKRLEEMLDMQGN
Subjt:  MVLSLDLQEFILRARVLKLYRHALRTAQKAPVHAREELRHTIRQEMENNRGCNERQKVRFLLSEGIERLKRLEEMLDMQGN
XP_023524988.1 uncharacterized protein LOC111788747 [Cucurbita pepo subsp. pepo]2.9e-3297.53Show/hide
Query:  MVLSLDLQEFILRARVLKLYRHALRTAQKAPVHAREELRHTIRQEMENNRGCNERQKVRFLLSEGIERLKRLEEMLDMQGN
        MVL LDLQEFILRARVLKLYR ALRTAQKAPVHAREELRHTIRQEMENNRGCNERQKVRFLLSEGIERLKRLEEMLDMQGN
Subjt:  MVLSLDLQEFILRARVLKLYRHALRTAQKAPVHAREELRHTIRQEMENNRGCNERQKVRFLLSEGIERLKRLEEMLDMQGN
TrEMBL top hitse value%identityAlignment
A0A6J1CHJ1 uncharacterized protein LOC1110112181.0e-2783.95Show/hide
Query:  MVLSLDLQEFILRARVLKLYRHALRTAQKAPVHAREELRHTIRQEMENNRGCNERQKVRFLLSEGIERLKRLEEMLDMQGN
        MV+SLDL EFILRARVLKL+R ALRTA+KAPVHAREELRHTIRQEMENNR CN++QKVR+L+SEGIE LKRL+EMLDMQG+
Subjt:  MVLSLDLQEFILRARVLKLYRHALRTAQKAPVHAREELRHTIRQEMENNRGCNERQKVRFLLSEGIERLKRLEEMLDMQGN
A0A6J1F8N3 uncharacterized protein LOC1114433215.0e-3090.12Show/hide
Query:  MVLSLDLQEFILRARVLKLYRHALRTAQKAPVHAREELRHTIRQEMENNRGCNERQKVRFLLSEGIERLKRLEEMLDMQGN
        MVL+LDLQEFILRARVLKLYR ALRT +KAPVHAREELRHTIRQEMENNRGC++RQKVRFLLSEGIERLKRL+EMLDMQG+
Subjt:  MVLSLDLQEFILRARVLKLYRHALRTAQKAPVHAREELRHTIRQEMENNRGCNERQKVRFLLSEGIERLKRLEEMLDMQGN
A0A6J1FM54 uncharacterized protein LOC1114464664.4e-34100Show/hide
Query:  MVLSLDLQEFILRARVLKLYRHALRTAQKAPVHAREELRHTIRQEMENNRGCNERQKVRFLLSEGIERLKRLEEMLDMQGN
        MVLSLDLQEFILRARVLKLYRHALRTAQKAPVHAREELRHTIRQEMENNRGCNERQKVRFLLSEGIERLKRLEEMLDMQGN
Subjt:  MVLSLDLQEFILRARVLKLYRHALRTAQKAPVHAREELRHTIRQEMENNRGCNERQKVRFLLSEGIERLKRLEEMLDMQGN
A0A6J1IFA5 uncharacterized protein LOC1114764182.1e-2886.42Show/hide
Query:  MVLSLDLQEFILRARVLKLYRHALRTAQKAPVHAREELRHTIRQEMENNRGCNERQKVRFLLSEGIERLKRLEEMLDMQGN
        MVL+LDLQEFILRARVLKLYR ALRT +KAPVHAREELRHTIRQEMENNR C++RQK+RFLLSEG ERLKRL+EMLDMQG+
Subjt:  MVLSLDLQEFILRARVLKLYRHALRTAQKAPVHAREELRHTIRQEMENNRGCNERQKVRFLLSEGIERLKRLEEMLDMQGN
A0A6J1IY12 uncharacterized protein LOC1114809621.3e-3095.06Show/hide
Query:  MVLSLDLQEFILRARVLKLYRHALRTAQKAPVHAREELRHTIRQEMENNRGCNERQKVRFLLSEGIERLKRLEEMLDMQGN
        MVLSLDLQEFILRARVLKLYR ALR AQKAPVHAREELR  IRQEMENNRGCNERQKVRFLLSEGIERLKRLEEMLDMQGN
Subjt:  MVLSLDLQEFILRARVLKLYRHALRTAQKAPVHAREELRHTIRQEMENNRGCNERQKVRFLLSEGIERLKRLEEMLDMQGN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G76065.1 LYR family of Fe/S cluster biogenesis protein6.2e-2567.5Show/hide
Query:  VLSLDLQEFILRARVLKLYRHALRTAQKAPVHAREELRHTIRQEMENNRGCNERQKVRFLLSEGIERLKRLEEMLDMQGN
        ++ LDLQ FILRARVLKLYR AL+ A +APVH R EL+ T+RQEME NR CN++QK+R+L+SEG+ER+K L+EMLDMQG+
Subjt:  VLSLDLQEFILRARVLKLYRHALRTAQKAPVHAREELRHTIRQEMENNRGCNERQKVRFLLSEGIERLKRLEEMLDMQGN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCTCTCCCTCGATTTACAGGAATTTATTCTCCGTGCAAGAGTGTTGAAACTGTACAGGCATGCTTTAAGAACTGCTCAAAAAGCTCCTGTCCACGCTCGA
GAGGAACTGAGGCATACAATCAGACAAGAAATGGAGAACAACCGCGGCTGCAATGAGAGACAGAAAGTAAGGTTTCTGCTGAGTGAAGGAATAGAGAGATTGAAG
CGTTTAGAGGAGATGTTGGATATGCAGGGTAACTAA
mRNA sequenceShow/hide mRNA sequence
TAACGTCAGATTGAACCAGAAATGGAATTCACTTCAGTTTGATCCACAGTGGGCTTGACGAACTGGTAGTAGCACCATCTATTTGTCCTCTAGGAGGAGAATTCG
CCATGGTTCTCTCCCTCGATTTACAGGAATTTATTCTCCGTGCAAGAGTGTTGAAACTGTACAGGCATGCTTTAAGAACTGCTCAAAAAGCTCCTGTCCACGCTC
GAGAGGAACTGAGGCATACAATCAGACAAGAAATGGAGAACAACCGCGGCTGCAATGAGAGACAGAAAGTAAGGTTTCTGCTGAGTGAAGGAATAGAGAGATTGA
AGCGTTTAGAGGAGATGTTGGATATGCAGGGTAACTAATGAAGATTGTCATCACCGGCATTATTCAGTAATCTTTTCAAATCTCTGTTACTTCAGTATGATATTG
AGACTCAAACTTGAATGCTGGCTTGATGAAACGATTGGATTCTGAAAACAATAATTGAATTCCTTGCAAAATTTCAATAACAAAAACAGATCTTTTAATTCCAAA
ACCTGGTCTACATTTTAGTAGAGAACAAAACAAAGAAGCTTAAGAAGAGGTTCAAGAGAACCAAACAGCCCCTTGTAATTTGTCCCCTCCTAATTTGAAGTATCT
AATCTAGGAACCTTTTGCCTTCTAATACTGTTGTAGACAGCTCTCCCAGCCCACGCAAGTGGCAGCCTCAGGCCAATTCACATAGGATCTTAACAAAATCAAAGC
AATGACCCAGCCATACAAACTGCTGGGTGATAGTTATAGTTATCAAATGGGGCTTTAACTTCTTGTGTCGGTCGACACTTTGCCAACGTAACTACAGCTTCGAGT
ATAAAAGAAGCCAGTTACTCTAAAGGGGCCGTGAGGCAAAACCTCTCTCGACCATCTTATCCACCAATTCCTCATGCTTCTTCAACTGTCCTGCCTTTCTTAGCT
GCTGCAGAACCATCTCATAGATAGGCATGCTGGGCTTTAAGCATTTCTCCTCAATCATTTCCCTGAAAAACTTGTAGGCATTGTTCCAATGCCCCATCCCACAAT
ATAACGATATCAGTACTTGGTAAGTATTCAAATTAGGCTCAACTTCTTCTTCTTCCATCTCCTTCTTCAACTTGAAAATCATATCAGCAGATTTTGATTCTGCAA
ACATCCGCATCAAGATATTGTACGTCACTGTATTTGGCTTACAACCCAGATCCTTCATCTTAGCAAACATCCTATGAACACCATTTACATCATGCGACTTCACGA
TACACCTAAATATGGGATTAAAGGTCGACGCATTCGGGGTACAGCCTTTCTTAGCCATAGAGTTGAGGACCTTTGTAGCCTCTCCAAGATTATCATCCTTACAAT
GAGTCTCAATAAGAAAGTTATAAGTAATTATGTCAGCAGCACAACCCAATCTCTTCATTTGATTGTACACTTGCAAAACCTTCTCTGTTCTACCAGCCTTCACGT
GGACTCTTATAAGATTGTTGAATGTAACTGAGTTGGGATTGCAACCAGCATCAATCATCTCAGAGAAAACATCATGGGCACGAGTAATTTGGCCACATCTACACA
ATGCATCAATCACAATGCTGTAAGTATAAACATTAGGGCTAATACCTGCCATCTTCATCTCTTTAAACACCCTCTCGGCCTCTGAGATATCACCGGCTCGACACC
AGCCATGGACCAGAATGCTGATAACAATTGTGAAAGCAATCTTGTCAGGATTGCAGCCGTAGTCCTCCATGCGATTAAACGCATGAACCGCCTCCGCCGCCAATC
CAGCCCTCACATACCGCCGGACAAGAATCGAGAAGGTCAATCATCTCGTTGTAGGGCTGTGCAGAGTGCTCGAACGTCTCGCTTGCCGTCGCCCAATTGAAGAAC
GCGAGGGCTTGGAGGAAGGGGATGCCATGGCGGACGCCACCAGATTTCTCGATGACGTAACGAACGACGCCCGGAGAGACGGCATGGACAGGTGAGATTTGGGAT
AGTTCGTTGGAGAGAGCAGAAATGGTGAAGTTAGGGCTTGGTGGAGTGGGATCGGGACTGGGATTTCTTCGATAGTATTCCTTAATTAGGGAATGGAATTTATCG
GCGGCCTGAATTTCTTCCGGTAAGAGGACAGGCTTTGAGGCTTTCGGAGTAGTATTGCTCGCGTCCTCGTCTTGAAGTTGAGACTCGGAAATTGAAGTGGAAGAT
GAAAATAAACGGTGATTCTGTAAGAACGGCGAGAGAGAAGACAGAAAGGGTGGAAGATTTGGCTTCGATTTGAACAGAGCCATTACTGGATTCTTCTCCGTTGAG
GTTTCAGTTCGCTCCGGCTGCACAGACACTCGGCTTGGCGTTGGGTTTTTGCAGGGTTTTGCAGCGAACCTTCAACCTCACAACTCACAGATCTACCGTAAAATT
GATTGCCCTAATTTCTAAATTTCTAAAAAAATTCTCCTTCTGTTTAAAAATAAATATTTCAAATTTGCTCAAGTTTTACTGCAAACAACAATTTCATTTAATTCC
TCATGTGAAGATCTGTGAGAAAATATTTTCATATATATTTTTTTAAAAATGAT
Protein sequenceShow/hide protein sequence
MVLSLDLQEFILRARVLKLYRHALRTAQKAPVHAREELRHTIRQEMENNRGCNERQKVRFLLSEGIERLKRLEEMLDMQGN