; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh02G000360 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G000360
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationCmo_Chr02:207147..207956
RNA-Seq ExpressionCmoCh02G000360
SyntenyCmoCh02G000360
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570576.1 hypothetical protein SDJN03_29491, partial [Cucurbita argyrosperma subsp. sororia]3.1e-14797.38Show/hide
Query:  AASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE
        AASSMALSSPSLAGQAVKLSP +AS++LGESRVTMRKT GRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE
Subjt:  AASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE

Query:  VIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLG
        VIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLG
Subjt:  VIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLG

Query:  LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK
        LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW++ATNFVPGK
Subjt:  LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK

XP_008456347.1 PREDICTED: chlorophyll a-b binding protein of LHCII type 1 [Cucumis melo]3.1e-14797.38Show/hide
Query:  AASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE
        AASSMALSSPSLAGQAVKLSP  AS+LLGE R+TMRKTAG+PKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE
Subjt:  AASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE

Query:  VIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLG
        VIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLG
Subjt:  VIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLG

Query:  LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK
        LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Subjt:  LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK

XP_022947180.1 chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita moschata]4.2e-152100Show/hide
Query:  MAAASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRE
        MAAASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRE
Subjt:  MAAASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRE

Query:  LEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDP
        LEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDP
Subjt:  LEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDP

Query:  LGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK
        LGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK
Subjt:  LGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK

XP_022986017.1 chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita maxima]8.1e-14897.75Show/hide
Query:  AASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE
        AASSMALSSPSLAGQAVKLSP +ASN+LGESRVTMRKT GRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE
Subjt:  AASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE

Query:  VIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLG
        VIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLG
Subjt:  VIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLG

Query:  LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK
        LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW++ATNFVPGK
Subjt:  LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK

XP_023534012.1 chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita pepo subsp. pepo]9.3e-15299.63Show/hide
Query:  MAAASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRE
        MAAASSMALSSPSLAGQAVKLSPAAASNLLGE+RVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRE
Subjt:  MAAASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRE

Query:  LEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDP
        LEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDP
Subjt:  LEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDP

Query:  LGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK
        LGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK
Subjt:  LGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK

TrEMBL top hitse value%identityAlignment
A0A5D3DVR3 Chlorophyll a-b binding protein, chloroplastic1.5e-14797.38Show/hide
Query:  AASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE
        AASSMALSSPSLAGQAVKLSP  AS+LLGE R+TMRKTAG+PKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE
Subjt:  AASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE

Query:  VIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLG
        VIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLG
Subjt:  VIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLG

Query:  LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK
        LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Subjt:  LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK

A0A6J1FVQ6 Chlorophyll a-b binding protein, chloroplastic1.5e-14797.38Show/hide
Query:  AASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE
        AASSMALSSPSLAGQAVKLSP +AS++LGESRVTMRKT GRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE
Subjt:  AASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE

Query:  VIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLG
        VIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLG
Subjt:  VIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLG

Query:  LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK
        LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW++ATNFVPGK
Subjt:  LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK

A0A6J1G646 Chlorophyll a-b binding protein, chloroplastic2.0e-152100Show/hide
Query:  MAAASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRE
        MAAASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRE
Subjt:  MAAASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRE

Query:  LEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDP
        LEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDP
Subjt:  LEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDP

Query:  LGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK
        LGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK
Subjt:  LGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK

A0A6J1I6A9 Chlorophyll a-b binding protein, chloroplastic2.0e-152100Show/hide
Query:  MAAASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRE
        MAAASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRE
Subjt:  MAAASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRE

Query:  LEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDP
        LEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDP
Subjt:  LEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDP

Query:  LGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK
        LGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK
Subjt:  LGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK

A0A6J1J6F4 Chlorophyll a-b binding protein, chloroplastic3.9e-14897.75Show/hide
Query:  AASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE
        AASSMALSSPSLAGQAVKLSP +ASN+LGESRVTMRKT GRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE
Subjt:  AASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE

Query:  VIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLG
        VIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLG
Subjt:  VIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLG

Query:  LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK
        LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW++ATNFVPGK
Subjt:  LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK

SwissProt top hitse value%identityAlignment
P07369 Chlorophyll a-b binding protein 3C, chloroplastic1.7e-14090.64Show/hide
Query:  AASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE
        A S+MALSS + AG+AVKLSP ++S + G  RVTMRKTA + KP SSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELE
Subjt:  AASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE

Query:  VIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLG
        VIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGE+ DP+YPGGSFDPLG
Subjt:  VIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLG

Query:  LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK
        LADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK
Subjt:  LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK

P09756 Chlorophyll a-b binding protein 3, chloroplastic3.2e-13991.45Show/hide
Query:  MAAASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRE
        MAAASSMALSSPSLAG+AVKL P+A        RV+MRKT    K VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRE
Subjt:  MAAASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRE

Query:  LEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDP
        LEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYRIAGGPLGE+TDPIYPGGSFDP
Subjt:  LEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDP

Query:  LGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK
        LGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLA PVNNNAWA+ATNFVPGK
Subjt:  LGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK

P12333 Chlorophyll a-b binding protein, chloroplastic2.4e-14291.01Show/hide
Query:  AASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE
        A+S+MALSSPSLAG+AVKL P  AS ++GE R+TMRKTAG+PK V S SPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELE
Subjt:  AASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE

Query:  VIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLG
        VIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRIAGGPLGE+ DP+YPGGSFDPLG
Subjt:  VIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLG

Query:  LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK
        LADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW FATNFVPGK
Subjt:  LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK

P27491 Chlorophyll a-b binding protein 7, chloroplastic1.9e-13989.1Show/hide
Query:  ASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV
        AS+MALSSPS AG AVKLSP ++S + G  +  MRKT  + KPVSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV
Subjt:  ASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV

Query:  IHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGL
        IH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGA+EGYR+AGGPLGE+TDP+YPGGSFDPLGL
Subjt:  IHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGL

Query:  ADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK
        ADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPL+NL DHLADPVNNNAWA+ATNFVPGK
Subjt:  ADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK

P27495 Chlorophyll a-b binding protein 40, chloroplastic1.0e-14090.26Show/hide
Query:  AASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE
        AAS+MALSSPS AG+AVKLSP ++S + G  +VTMRKTA + K VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELE
Subjt:  AASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE

Query:  VIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLG
        VIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR+AGGPLGE+ DP+YPGGSFDPLG
Subjt:  VIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLG

Query:  LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK
        LA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK
Subjt:  LADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK

Arabidopsis top hitse value%identityAlignment
AT1G29910.1 chlorophyll A/B binding protein 38.4e-13588.43Show/hide
Query:  AASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE
        AAS+MALSSP+ AG+AV LSP AAS +LG  RVTMRKT  +PK   SGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELE
Subjt:  AASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE

Query:  VIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG-GPLGEITDPIYPGGSFDPL
        VIHSRWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYR+AG GPLGE  D +YPGGSFDPL
Subjt:  VIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG-GPLGEITDPIYPGGSFDPL

Query:  GLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK
        GLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPVNNNAWAFATNFVPGK
Subjt:  GLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK

AT1G29920.1 chlorophyll A/B-binding protein 28.4e-13588.43Show/hide
Query:  AASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE
        AAS+MALSSP+ AG+AV LSP AAS +LG  RVTMRKT  +PK   SGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELE
Subjt:  AASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE

Query:  VIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG-GPLGEITDPIYPGGSFDPL
        VIHSRWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYR+AG GPLGE  D +YPGGSFDPL
Subjt:  VIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG-GPLGEITDPIYPGGSFDPL

Query:  GLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK
        GLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPVNNNAWAFATNFVPGK
Subjt:  GLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK

AT1G29930.1 chlorophyll A/B binding protein 12.2e-13588.81Show/hide
Query:  AASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE
        AAS+MALSSP+ AG+AVKLSP AAS +LG  RVTMRKT  +PK   SGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELE
Subjt:  AASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE

Query:  VIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG-GPLGEITDPIYPGGSFDPL
        VIHSRWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYR+AG GPLGE  D +YPGGSFDPL
Subjt:  VIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG-GPLGEITDPIYPGGSFDPL

Query:  GLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK
        GLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPVNNNAWAFATNFVPGK
Subjt:  GLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK

AT2G34420.1 photosystem II light harvesting complex gene B1B23.2e-13488.06Show/hide
Query:  AASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE
        A+S+MALSSP+ AG+AVK    AAS++LG  RVTMRKT  +PK   SGSPWYG DRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELE
Subjt:  AASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE

Query:  VIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG-GPLGEITDPIYPGGSFDPL
        VIHSRWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYR+AG GPLGE  D +YPGGSFDPL
Subjt:  VIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG-GPLGEITDPIYPGGSFDPL

Query:  GLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK
        GLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK
Subjt:  GLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK

AT2G34430.1 light-harvesting chlorophyll-protein complex II subunit B15.4e-13488.06Show/hide
Query:  AASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE
        AAS+MALSSP+L G+AVKLSP AAS + G  R+TMRK +    P  SGSPWYG DRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELE
Subjt:  AASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELE

Query:  VIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG-GPLGEITDPIYPGGSFDPL
        VIHSRWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYR+AG GPLGE  D +YPGGSFDPL
Subjt:  VIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG-GPLGEITDPIYPGGSFDPL

Query:  GLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK
        GLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK
Subjt:  GLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCAGCTTCATCAATGGCTTTGTCCTCCCCATCTCTCGCCGGCCAAGCCGTGAAATTATCCCCCGCCGCTGCCTCCAACCTCCTCGGCGAGAGCCGTGTCACCAT
GAGGAAAACCGCTGGCAGGCCCAAGCCCGTCTCCTCCGGTAGCCCATGGTACGGCCCTGATCGTGTCAAGTACTTGGGCCCATTCTCCGGCGAGCCCCCTTCCTATCTCA
CCGGCGAGTTCCCCGGCGACTACGGCTGGGACACTGCTGGCCTCTCTGCTGACCCAGAGACCTTCGCCAAAAACCGTGAGCTGGAAGTGATCCACTCGAGGTGGGCCATG
CTTGGAGCTCTTGGCTGCGTCTTCCCGGAGCTTCTGTCTCGCAACGGCGTGAAATTCGGCGAGGCCGTGTGGTTCAAAGCCGGGTCTCAGATCTTCAGCGAGGGTGGGCT
CGACTATTTGGGGAACCCGAGCTTGGTTCACGCGCAGAGCATTCTGGCGATCTGGGCTTGCCAGGTTGTGCTGATGGGAGCCGTGGAGGGGTACAGAATTGCAGGTGGGC
CGCTGGGTGAGATCACGGACCCAATTTACCCAGGGGGCAGCTTCGACCCATTGGGGCTCGCTGACGACCCAGAGGCCTTCGCGGAGCTCAAAGTGAAGGAGCTGAAGAAT
GGAAGATTGGCAATGTTTTCGATGTTTGGATTCTTTGTGCAGGCAATTGTGACAGGGAAAGGACCTTTGGAGAACTTGGCTGACCATTTGGCCGACCCTGTTAACAACAA
CGCTTGGGCTTTTGCCACTAACTTTGTACCTGGAAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCAGCTTCATCAATGGCTTTGTCCTCCCCATCTCTCGCCGGCCAAGCCGTGAAATTATCCCCCGCCGCTGCCTCCAACCTCCTCGGCGAGAGCCGTGTCACCAT
GAGGAAAACCGCTGGCAGGCCCAAGCCCGTCTCCTCCGGTAGCCCATGGTACGGCCCTGATCGTGTCAAGTACTTGGGCCCATTCTCCGGCGAGCCCCCTTCCTATCTCA
CCGGCGAGTTCCCCGGCGACTACGGCTGGGACACTGCTGGCCTCTCTGCTGACCCAGAGACCTTCGCCAAAAACCGTGAGCTGGAAGTGATCCACTCGAGGTGGGCCATG
CTTGGAGCTCTTGGCTGCGTCTTCCCGGAGCTTCTGTCTCGCAACGGCGTGAAATTCGGCGAGGCCGTGTGGTTCAAAGCCGGGTCTCAGATCTTCAGCGAGGGTGGGCT
CGACTATTTGGGGAACCCGAGCTTGGTTCACGCGCAGAGCATTCTGGCGATCTGGGCTTGCCAGGTTGTGCTGATGGGAGCCGTGGAGGGGTACAGAATTGCAGGTGGGC
CGCTGGGTGAGATCACGGACCCAATTTACCCAGGGGGCAGCTTCGACCCATTGGGGCTCGCTGACGACCCAGAGGCCTTCGCGGAGCTCAAAGTGAAGGAGCTGAAGAAT
GGAAGATTGGCAATGTTTTCGATGTTTGGATTCTTTGTGCAGGCAATTGTGACAGGGAAAGGACCTTTGGAGAACTTGGCTGACCATTTGGCCGACCCTGTTAACAACAA
CGCTTGGGCTTTTGCCACTAACTTTGTACCTGGAAAGTGA
Protein sequenceShow/hide protein sequence
MAAASSMALSSPSLAGQAVKLSPAAASNLLGESRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM
LGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKN
GRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK