; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh02G001130 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G001130
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionELMO domain-containing protein A
Genome locationCmo_Chr02:593568..597299
RNA-Seq ExpressionCmoCh02G001130
SyntenyCmoCh02G001130
Gene Ontology termsNA
InterPro domainsIPR006816 - ELMO domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7034926.1 xanthohumol 4'-O-methyltransferase, partial [Cucurbita argyrosperma subsp. argyrosperma]2.4e-6078.71Show/hide
Query:  TNAMVGPRTWIGGLFNRAGNRKNDKFVQYPLSPL-----------------------QEALKALWDAAFPNIELKGMVSEQWKEMGWQGPNPSTDFRGCG
        TNAMVGPRTWIGGLFNRAGNRKNDKFVQY LSPL                       QEALKALWDAAFPNIELKGMVSEQWKEMGWQGPNPSTDFRGCG
Subjt:  TNAMVGPRTWIGGLFNRAGNRKNDKFVQYPLSPL-----------------------QEALKALWDAAFPNIELKGMVSEQWKEMGWQGPNPSTDFRGCG

Query:  LISLENLLFFSRTFP---------EGGNRATWEYPFAVAGINISFMLIQMLDLNS
        LISLENLLFFSRTFP         EGGNRATWEYPFAVAGINISFMLIQMLDLNS
Subjt:  LISLENLLFFSRTFP---------EGGNRATWEYPFAVAGINISFMLIQMLDLNS

XP_008448271.1 PREDICTED: uncharacterized protein LOC103490510 isoform X3 [Cucumis melo]1.7e-5868.6Show/hide
Query:  TNAMVGPRTWIGGLFNRAGNRKNDKFVQYPLSPL-----------------------QEALKALWDAAFPNIELKGMVSEQWKEMGWQGPNPSTDFRGCG
        TNAMVGPR+WI GLFNR+GNRK+DKF+QYPLSPL                       QEAL+ALW+AA+PNIELKGM+SEQWKEMGWQGPNPSTDFRGCG
Subjt:  TNAMVGPRTWIGGLFNRAGNRKNDKFVQYPLSPL-----------------------QEALKALWDAAFPNIELKGMVSEQWKEMGWQGPNPSTDFRGCG

Query:  LISLENLLFFSRTFP---------EGGNRATWEYPFAVAGINISFMLIQMLDLNSGGAARNQSAAGKRAISG
         ISLENLLFFSR FP         E GNRATWEYPFAVAGIN+SFMLIQMLDLN+GG A N++ A K AI G
Subjt:  LISLENLLFFSRTFP---------EGGNRATWEYPFAVAGINISFMLIQMLDLNSGGAARNQSAAGKRAISG

XP_022947762.1 ELMO domain-containing protein A isoform X1 [Cucurbita moschata]2.8e-6179.35Show/hide
Query:  TNAMVGPRTWIGGLFNRAGNRKNDKFVQYPLSPL-----------------------QEALKALWDAAFPNIELKGMVSEQWKEMGWQGPNPSTDFRGCG
        TNAMVGPRTWIGGLFNRAGNRKNDKFVQYPLSPL                       QEALKALWDAAFPNIELKGMVSEQWKEMGWQGPNPSTDFRGCG
Subjt:  TNAMVGPRTWIGGLFNRAGNRKNDKFVQYPLSPL-----------------------QEALKALWDAAFPNIELKGMVSEQWKEMGWQGPNPSTDFRGCG

Query:  LISLENLLFFSRTFP---------EGGNRATWEYPFAVAGINISFMLIQMLDLNS
        LISLENLLFFSRTFP         EGGNRATWEYPFAVAGINISFMLIQMLDLNS
Subjt:  LISLENLLFFSRTFP---------EGGNRATWEYPFAVAGINISFMLIQMLDLNS

XP_022947763.1 ELMO domain-containing protein A isoform X2 [Cucurbita moschata]1.5e-5978.95Show/hide
Query:  MVGPRTWIGGLFNRAGNRKNDKFVQYPLSPL-----------------------QEALKALWDAAFPNIELKGMVSEQWKEMGWQGPNPSTDFRGCGLIS
        MVGPRTWIGGLFNRAGNRKNDKFVQYPLSPL                       QEALKALWDAAFPNIELKGMVSEQWKEMGWQGPNPSTDFRGCGLIS
Subjt:  MVGPRTWIGGLFNRAGNRKNDKFVQYPLSPL-----------------------QEALKALWDAAFPNIELKGMVSEQWKEMGWQGPNPSTDFRGCGLIS

Query:  LENLLFFSRTFP---------EGGNRATWEYPFAVAGINISFMLIQMLDLNS
        LENLLFFSRTFP         EGGNRATWEYPFAVAGINISFMLIQMLDLNS
Subjt:  LENLLFFSRTFP---------EGGNRATWEYPFAVAGINISFMLIQMLDLNS

XP_023534283.1 ELMO domain-containing protein A isoform X1 [Cucurbita pepo subsp. pepo]3.1e-6077.42Show/hide
Query:  TNAMVGPRTWIGGLFNRAGNRKNDKFVQYPLSPL-----------------------QEALKALWDAAFPNIELKGMVSEQWKEMGWQGPNPSTDFRGCG
        TNAMVGPRTWIGGLFNR+GNRKNDKFVQYPL+PL                       QEALKALWDAAFPNIELKGMVSEQWK+MGWQGPNPSTDFRGCG
Subjt:  TNAMVGPRTWIGGLFNRAGNRKNDKFVQYPLSPL-----------------------QEALKALWDAAFPNIELKGMVSEQWKEMGWQGPNPSTDFRGCG

Query:  LISLENLLFFSRTFP---------EGGNRATWEYPFAVAGINISFMLIQMLDLNS
        LISLENLLFFSRTFP         EGGNRATWEYPFAVAGINISFMLIQMLDLNS
Subjt:  LISLENLLFFSRTFP---------EGGNRATWEYPFAVAGINISFMLIQMLDLNS

TrEMBL top hitse value%identityAlignment
A0A1S3BK68 uncharacterized protein LOC103490510 isoform X38.3e-5968.6Show/hide
Query:  TNAMVGPRTWIGGLFNRAGNRKNDKFVQYPLSPL-----------------------QEALKALWDAAFPNIELKGMVSEQWKEMGWQGPNPSTDFRGCG
        TNAMVGPR+WI GLFNR+GNRK+DKF+QYPLSPL                       QEAL+ALW+AA+PNIELKGM+SEQWKEMGWQGPNPSTDFRGCG
Subjt:  TNAMVGPRTWIGGLFNRAGNRKNDKFVQYPLSPL-----------------------QEALKALWDAAFPNIELKGMVSEQWKEMGWQGPNPSTDFRGCG

Query:  LISLENLLFFSRTFP---------EGGNRATWEYPFAVAGINISFMLIQMLDLNSGGAARNQSAAGKRAISG
         ISLENLLFFSR FP         E GNRATWEYPFAVAGIN+SFMLIQMLDLN+GG A N++ A K AI G
Subjt:  LISLENLLFFSRTFP---------EGGNRATWEYPFAVAGINISFMLIQMLDLNSGGAARNQSAAGKRAISG

A0A2I4EF94 ELMO domain-containing protein A-like isoform X24.3e-5575.57Show/hide
Query:  NAMVGPRTWIGGLFNRAGNRKNDKFVQYPLSPLQEALKALWDAAFPNIELKGMVSEQWKEMGWQGPNPSTDFRGCGLISLENLLFFSRTFP---------
        NAMVGPR+W+GGLFNR+ N++N+KF+ YPL PLQEAL+ALW AAFPNI  KG++SEQWKEMGWQGPNPSTDFRGCGLISLENLLFF+RT+P         
Subjt:  NAMVGPRTWIGGLFNRAGNRKNDKFVQYPLSPLQEALKALWDAAFPNIELKGMVSEQWKEMGWQGPNPSTDFRGCGLISLENLLFFSRTFP---------

Query:  EGGNRATWEYPFAVAGINISFMLIQMLDLNS
        +GG RA WEYPFAVAGIN+SFMLIQMLDL+S
Subjt:  EGGNRATWEYPFAVAGINISFMLIQMLDLNS

A0A6J1G7C3 ELMO domain-containing protein A isoform X11.4e-6179.35Show/hide
Query:  TNAMVGPRTWIGGLFNRAGNRKNDKFVQYPLSPL-----------------------QEALKALWDAAFPNIELKGMVSEQWKEMGWQGPNPSTDFRGCG
        TNAMVGPRTWIGGLFNRAGNRKNDKFVQYPLSPL                       QEALKALWDAAFPNIELKGMVSEQWKEMGWQGPNPSTDFRGCG
Subjt:  TNAMVGPRTWIGGLFNRAGNRKNDKFVQYPLSPL-----------------------QEALKALWDAAFPNIELKGMVSEQWKEMGWQGPNPSTDFRGCG

Query:  LISLENLLFFSRTFP---------EGGNRATWEYPFAVAGINISFMLIQMLDLNS
        LISLENLLFFSRTFP         EGGNRATWEYPFAVAGINISFMLIQMLDLNS
Subjt:  LISLENLLFFSRTFP---------EGGNRATWEYPFAVAGINISFMLIQMLDLNS

A0A6J1G7H6 ELMO domain-containing protein A isoform X27.5e-6078.95Show/hide
Query:  MVGPRTWIGGLFNRAGNRKNDKFVQYPLSPL-----------------------QEALKALWDAAFPNIELKGMVSEQWKEMGWQGPNPSTDFRGCGLIS
        MVGPRTWIGGLFNRAGNRKNDKFVQYPLSPL                       QEALKALWDAAFPNIELKGMVSEQWKEMGWQGPNPSTDFRGCGLIS
Subjt:  MVGPRTWIGGLFNRAGNRKNDKFVQYPLSPL-----------------------QEALKALWDAAFPNIELKGMVSEQWKEMGWQGPNPSTDFRGCGLIS

Query:  LENLLFFSRTFP---------EGGNRATWEYPFAVAGINISFMLIQMLDLNS
        LENLLFFSRTFP         EGGNRATWEYPFAVAGINISFMLIQMLDLNS
Subjt:  LENLLFFSRTFP---------EGGNRATWEYPFAVAGINISFMLIQMLDLNS

A0A6J1I002 ELMO domain-containing protein A2.9e-5674.84Show/hide
Query:  TNAMVGPRTWIGGLFNRAGNRKNDKFVQYPLSPL-----------------------QEALKALWDAAFPNIELKGMVSEQWKEMGWQGPNPSTDFRGCG
        TNAMVGPRTWIGGLFNR+GNRK+D  +QYPLSPL                       QEALKALWDAAFPNI LKGMVSEQWKEMGWQGPNPSTDFRGCG
Subjt:  TNAMVGPRTWIGGLFNRAGNRKNDKFVQYPLSPL-----------------------QEALKALWDAAFPNIELKGMVSEQWKEMGWQGPNPSTDFRGCG

Query:  LISLENLLFFSRTFP---------EGGNRATWEYPFAVAGINISFMLIQMLDLNS
         ISLENLLFFSRTFP         EGGNRATWEYPFAVAGINISFMLIQMLDLNS
Subjt:  LISLENLLFFSRTFP---------EGGNRATWEYPFAVAGINISFMLIQMLDLNS

SwissProt top hitse value%identityAlignment
Q08DZ3 ELMO domain-containing protein 25.6e-1234.78Show/hide
Query:  QEALKALWDAAFPNIELKGMVSEQWKEMGWQGPNPSTDFRGCGLISLENLLFFSRTFP-------EGGNRATWEYPFAVAGINISFMLIQML
        ++ L  LW+   P  +LK  +S+QW ++G+QG +P TDFRG G++ L NL++FS  +           N     Y +A+ GIN++ M   +L
Subjt:  QEALKALWDAAFPNIELKGMVSEQWKEMGWQGPNPSTDFRGCGLISLENLLFFSRTFP-------EGGNRATWEYPFAVAGINISFMLIQML

Q0IIE6 ELMO domain-containing protein 11.1e-1033.94Show/hide
Query:  QEALKALWDAAFPNIELKGMVSEQWKEMGWQGPNPSTDFRGCGLISLENLLFFSRTFPEGG---------------NRATWE---------YPFAVAGIN
        +E L  LW    PN  L+  +S+QW E+G+QG +P TDFRG GL+ L NL +F+                      ++A WE         Y FA+ GIN
Subjt:  QEALKALWDAAFPNIELKGMVSEQWKEMGWQGPNPSTDFRGCGLISLENLLFFSRTFPEGG---------------NRATWE---------YPFAVAGIN

Query:  ISFMLIQML
        I+ +   +L
Subjt:  ISFMLIQML

Q54VR8 ELMO domain-containing protein B2.7e-1434.78Show/hide
Query:  QEALKALWDAAFPNIELKGMVSEQWKEMGWQGPNPSTDFRGCGLISLENLLFFSRTFPEG------GNRATWEYPFAVAGINISFMLIQMLD
        + +L+ LW+A  P++     +S++W  +G+QG +P+TDFRG G++ L+NL++FS    E        + +   YPFA+ GINI+ +++ ++D
Subjt:  QEALKALWDAAFPNIELKGMVSEQWKEMGWQGPNPSTDFRGCGLISLENLLFFSRTFPEG------GNRATWEYPFAVAGINISFMLIQMLD

Q54YW1 ELMO domain-containing protein A1.6e-1440.38Show/hide
Query:  NRKNDKFVQYPLSPLQEALKALWDAAFPNIELKGMVSEQWKEMGWQGPNPSTDFRGCGLISLENLLFFSRTFPEGG--------NRATWEYPFAVAGINI
        NRKN  F     S     L  LW   +P ++L+  VSEQWK+MG+QG +P TDFR  G+  L+NL++F++ + E          +R   EYP A AGI +
Subjt:  NRKNDKFVQYPLSPLQEALKALWDAAFPNIELKGMVSEQWKEMGWQGPNPSTDFRGCGLISLENLLFFSRTFPEGG--------NRATWEYPFAVAGINI

Query:  SFML
        +F L
Subjt:  SFML

Q8IZ81 ELMO domain-containing protein 21.9e-1235.87Show/hide
Query:  QEALKALWDAAFPNIELKGMVSEQWKEMGWQGPNPSTDFRGCGLISLENLLFFSRTFP-------EGGNRATWEYPFAVAGINISFMLIQML
        +E L  LW+   P  +L   +S+QW E+G+QG +P TDFRG G++ L NL++FS  +           N     Y +A+ GIN++ M   +L
Subjt:  QEALKALWDAAFPNIELKGMVSEQWKEMGWQGPNPSTDFRGCGLISLENLLFFSRTFP-------EGGNRATWEYPFAVAGINISFMLIQML

Arabidopsis top hitse value%identityAlignment
AT1G03620.1 ELMO/CED-12 family protein5.5e-4758.13Show/hide
Query:  EGVTKTNAMVGPRTWIGGLFNRAGNRKNDKFVQYPLSPL-----------------------QEALKALWDAAFPNIELKGMVSEQWKEMGWQGPNPSTD
        E V     MVG R+WIGGLF R+ NR+ DK V Y LSPL                       QE+LKALW+ AFPN+ L G+V+EQWKEMGWQGPNPSTD
Subjt:  EGVTKTNAMVGPRTWIGGLFNRAGNRKNDKFVQYPLSPL-----------------------QEALKALWDAAFPNIELKGMVSEQWKEMGWQGPNPSTD

Query:  FRGCGLISLENLLFFSRTFP---------EGGNRATWEYPFAVAGINISFMLIQMLDLNS
        FRGCG I+LENLLF +RT+P         + G+RA WEYPFAVAGINISFMLIQMLDL +
Subjt:  FRGCGLISLENLLFFSRTFP---------EGGNRATWEYPFAVAGINISFMLIQMLDLNS

AT3G60260.1 ELMO/CED-12 family protein2.0e-3367.35Show/hide
Query:  QEALKALWDAAFPNIELKGMVSEQWKEMGWQGPNPSTDFRGCGLISLENLLFFSRTFPEG---------GNRATWEYPFAVAGINISFMLIQMLDLNS
        QEALK LW  AFP  EL G+VS+QWKEMGWQG +PSTDFRG G ISLENLL+F+R FP+          G+R+ WEYPFAVAGINI+FMLIQMLDL +
Subjt:  QEALKALWDAAFPNIELKGMVSEQWKEMGWQGPNPSTDFRGCGLISLENLLFFSRTFPEG---------GNRATWEYPFAVAGINISFMLIQMLDLNS

AT3G60260.2 ELMO/CED-12 family protein2.0e-3367.35Show/hide
Query:  QEALKALWDAAFPNIELKGMVSEQWKEMGWQGPNPSTDFRGCGLISLENLLFFSRTFPEG---------GNRATWEYPFAVAGINISFMLIQMLDLNS
        QEALK LW  AFP  EL G+VS+QWKEMGWQG +PSTDFRG G ISLENLL+F+R FP+          G+R+ WEYPFAVAGINI+FMLIQMLDL +
Subjt:  QEALKALWDAAFPNIELKGMVSEQWKEMGWQGPNPSTDFRGCGLISLENLLFFSRTFPEG---------GNRATWEYPFAVAGINISFMLIQMLDLNS

AT3G60260.3 ELMO/CED-12 family protein2.0e-3367.35Show/hide
Query:  QEALKALWDAAFPNIELKGMVSEQWKEMGWQGPNPSTDFRGCGLISLENLLFFSRTFPEG---------GNRATWEYPFAVAGINISFMLIQMLDLNS
        QEALK LW  AFP  EL G+VS+QWKEMGWQG +PSTDFRG G ISLENLL+F+R FP+          G+R+ WEYPFAVAGINI+FMLIQMLDL +
Subjt:  QEALKALWDAAFPNIELKGMVSEQWKEMGWQGPNPSTDFRGCGLISLENLLFFSRTFPEG---------GNRATWEYPFAVAGINISFMLIQMLDLNS

AT3G60260.4 ELMO/CED-12 family protein2.0e-3367.35Show/hide
Query:  QEALKALWDAAFPNIELKGMVSEQWKEMGWQGPNPSTDFRGCGLISLENLLFFSRTFPEG---------GNRATWEYPFAVAGINISFMLIQMLDLNS
        QEALK LW  AFP  EL G+VS+QWKEMGWQG +PSTDFRG G ISLENLL+F+R FP+          G+R+ WEYPFAVAGINI+FMLIQMLDL +
Subjt:  QEALKALWDAAFPNIELKGMVSEQWKEMGWQGPNPSTDFRGCGLISLENLLFFSRTFPEG---------GNRATWEYPFAVAGINISFMLIQMLDLNS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTGAGGCAGACAAACACAGATCAAAGCGAAGAAATGTCACTCATTTTCTTCCCCCAAATCCAATCTTCTTCCTCTTCTTCTCTGGTTCCTATTGTTTCCCCTTCAA
ACCCCTTCTTCCCGTGGTGCCCACCGCCCGAACCCACATACCAGGACGGTCTAGGTTACCACCACCGCCGCCGCCGCCTCTCTGCACCGCCCATTTGTTGATGAAGATGA
AATATATTGGAGACAGAGAAGGGGTGACGAAGACTAATGCTATGGTTGGACCACGAACATGGATTGGAGGACTTTTCAATCGCGCAGGCAACAGAAAGAATGATAAGTTT
GTTCAGTACCCGTTGAGTCCTCTTCAGGAAGCCCTGAAAGCATTGTGGGATGCTGCCTTTCCAAATATTGAGCTCAAAGGGATGGTATCTGAGCAATGGAAAGAAATGGG
TTGGCAAGGACCTAATCCATCCACTGACTTTAGGGGTTGCGGTCTCATTTCGCTCGAAAATTTGCTGTTTTTCTCCAGGACGTTTCCGGAAGGTGGTAATCGAGCAACTT
GGGAATATCCGTTTGCTGTTGCTGGCATAAACATTTCATTTATGTTGATACAAATGTTGGATTTAAACTCAGGAGGTGCTGCAAGAAACCAGAGCGCAGCTGGAAAGAGA
GCTATCTCTGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTGAGGCAGACAAACACAGATCAAAGCGAAGAAATGTCACTCATTTTCTTCCCCCAAATCCAATCTTCTTCCTCTTCTTCTCTGGTTCCTATTGTTTCCCCTTCAA
ACCCCTTCTTCCCGTGGTGCCCACCGCCCGAACCCACATACCAGGACGGTCTAGGTTACCACCACCGCCGCCGCCGCCTCTCTGCACCGCCCATTTGTTGATGAAGATGA
AATATATTGGAGACAGAGAAGGGGTGACGAAGACTAATGCTATGGTTGGACCACGAACATGGATTGGAGGACTTTTCAATCGCGCAGGCAACAGAAAGAATGATAAGTTT
GTTCAGTACCCGTTGAGTCCTCTTCAGGAAGCCCTGAAAGCATTGTGGGATGCTGCCTTTCCAAATATTGAGCTCAAAGGGATGGTATCTGAGCAATGGAAAGAAATGGG
TTGGCAAGGACCTAATCCATCCACTGACTTTAGGGGTTGCGGTCTCATTTCGCTCGAAAATTTGCTGTTTTTCTCCAGGACGTTTCCGGAAGGTGGTAATCGAGCAACTT
GGGAATATCCGTTTGCTGTTGCTGGCATAAACATTTCATTTATGTTGATACAAATGTTGGATTTAAACTCAGGAGGTGCTGCAAGAAACCAGAGCGCAGCTGGAAAGAGA
GCTATCTCTGGATGATGTTCACAGAATAGAAGATCTACCATCTTATAATCTCTTATATCTCTCTAAC
Protein sequenceShow/hide protein sequence
MPEADKHRSKRRNVTHFLPPNPIFFLFFSGSYCFPFKPLLPVVPTARTHIPGRSRLPPPPPPPLCTAHLLMKMKYIGDREGVTKTNAMVGPRTWIGGLFNRAGNRKNDKF
VQYPLSPLQEALKALWDAAFPNIELKGMVSEQWKEMGWQGPNPSTDFRGCGLISLENLLFFSRTFPEGGNRATWEYPFAVAGINISFMLIQMLDLNSGGAARNQSAAGKR
AISG