; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh02G001300 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G001300
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionWound-responsive family protein
Genome locationCmo_Chr02:660396..660647
RNA-Seq ExpressionCmoCh02G001300
SyntenyCmoCh02G001300
Gene Ontology termsNA
InterPro domainsIPR022251 - Protein of unknown function wound-induced


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFQ04487.1 hypothetical protein PHJA_002592600 [Phtheirospermum japonicum]2.3e-0848.28Show/hide
Query:  MSYLGRVWMAASVAVVHGGQSDARRGSAEGILTLHRNAETTAVAVDLRQFSTVTSHS---NRDGDEKR-QADESLRRVMYFNCWGQG
        MS + R+++AASVAVV+ G SD  +    G+ +L+  +     A DLR  S V + +   +R GDE+R Q DESLR+VMYFNCWGQG
Subjt:  MSYLGRVWMAASVAVVHGGQSDARRGSAEGILTLHRNAETTAVAVDLRQFSTVTSHS---NRDGDEKR-QADESLRRVMYFNCWGQG

KAA0047914.1 wound-responsive family protein [Cucumis melo var. makuwa]3.5e-0948.91Show/hide
Query:  MSYLG---RVWMAASVAVVHGGQSDARRGSA-EGILTLHR-----NAETTAVAVDLRQFSTVTSHSNRDGDEKRQADESLRRVMYFNCWGQG
        MSYLG   R+WM ASVAVV  GQSD     A +G+++L +     +AETT  AV+LR  S+  +    D   +   +ESLRRVMY NCWGQG
Subjt:  MSYLG---RVWMAASVAVVHGGQSDARRGSA-EGILTLHR-----NAETTAVAVDLRQFSTVTSHSNRDGDEKRQADESLRRVMYFNCWGQG

KAF3948378.1 hypothetical protein CMV_025616 [Castanea mollissima]3.0e-0847.87Show/hide
Query:  MSYLGRVWMAASVAVVHGGQSDARRGSAEGILTLHRNAE-----TTAVAVDLRQFSTVTSH------SNRDGDEKRQADESLRRVMYFNCWGQG
        MSYL RVWMAASVAVV  G +D  +    G+ +L          T + A DLRQ S +          NRDG+ +R +DESLRR+MY NCWGQG
Subjt:  MSYLGRVWMAASVAVVHGGQSDARRGSAEGILTLHRNAE-----TTAVAVDLRQFSTVTSH------SNRDGDEKRQADESLRRVMYFNCWGQG

KAG6604822.1 Vesicle-associated protein 4-2, partial [Cucurbita argyrosperma subsp. sororia]3.4e-3695.18Show/hide
Query:  MSYLGRVWMAASVAVVHGGQSDARRGSAEGILTLHRNAETTAVAVDLRQFSTVTSHSNRDGDEKRQADESLRRVMYFNCWGQG
        MSYLGRVWMAASVAVVHGGQSD R GSAEGILTLHRNAETTAVAVDLRQFST TSHSNRDGDEK QADESLRRVMYFNCWGQG
Subjt:  MSYLGRVWMAASVAVVHGGQSDARRGSAEGILTLHRNAETTAVAVDLRQFSTVTSHSNRDGDEKRQADESLRRVMYFNCWGQG

KAG7034937.1 hypothetical protein SDJN02_01730, partial [Cucurbita argyrosperma subsp. argyrosperma]3.4e-3695.18Show/hide
Query:  MSYLGRVWMAASVAVVHGGQSDARRGSAEGILTLHRNAETTAVAVDLRQFSTVTSHSNRDGDEKRQADESLRRVMYFNCWGQG
        MSYLGRVWMAASVAVVHGGQSD R GSAEGILTLHRNAETTAVAVDLRQFST TSHSNRDGDEK QADESLRRVMYFNCWGQG
Subjt:  MSYLGRVWMAASVAVVHGGQSDARRGSAEGILTLHRNAETTAVAVDLRQFSTVTSHSNRDGDEKRQADESLRRVMYFNCWGQG

TrEMBL top hitse value%identityAlignment
A0A072VAJ9 Wound-responsive family protein9.4e-0845.45Show/hide
Query:  MSYLGRVWMAASVAVVHGGQSDARRGSAEGILTLHRNAE---TTAVAVDLRQFS-TVTSHSNRDGDEK-RQADESLRRVMYFNCWGQG
        MSYL RVWMAA+VAV   G +D        + ++H+N     +     DLR  S  V S  + + DEK R+ D+SLR+VMY NCWGQG
Subjt:  MSYLGRVWMAASVAVVHGGQSDARRGSAEGILTLHRNAE---TTAVAVDLRQFS-TVTSHSNRDGDEK-RQADESLRRVMYFNCWGQG

A0A2Z6N4H0 Uncharacterized protein1.6e-0744.44Show/hide
Query:  MSYLGRVWMAASVAVVHGGQSDARRGSAEGILTLHRNAE---TTAVAVDLRQFS----TVTSHSNRDGDEKRQADESLRRVMYFNCWGQG
        MSYL RVWMAA+VAV   G +D        I ++H+N     +     DLR  S    T  S S+   D  R+ D+SLR+VMY NCWGQG
Subjt:  MSYLGRVWMAASVAVVHGGQSDARRGSAEGILTLHRNAE---TTAVAVDLRQFS----TVTSHSNRDGDEKRQADESLRRVMYFNCWGQG

A0A5A7TY19 Wound-responsive family protein1.7e-0948.91Show/hide
Query:  MSYLG---RVWMAASVAVVHGGQSDARRGSA-EGILTLHR-----NAETTAVAVDLRQFSTVTSHSNRDGDEKRQADESLRRVMYFNCWGQG
        MSYLG   R+WM ASVAVV  GQSD     A +G+++L +     +AETT  AV+LR  S+  +    D   +   +ESLRRVMY NCWGQG
Subjt:  MSYLG---RVWMAASVAVVHGGQSDARRGSA-EGILTLHR-----NAETTAVAVDLRQFSTVTSHSNRDGDEKRQADESLRRVMYFNCWGQG

A0A5N6RB28 Uncharacterized protein4.2e-0847.31Show/hide
Query:  MSYLGRVWMAASVAVVHGGQSDARRGSAEGILTLH---RNAETTAVAVDLRQFSTVTS------HSNRDGDEK-RQADESLRRVMYFNCWGQG
        MSYL R+WMAASVAVV  G +D  R    G+ +L    R   + + + DLR  S +          + D DE+ RQA+ESLRRVMY NCWGQG
Subjt:  MSYLGRVWMAASVAVVHGGQSDARRGSAEGILTLH---RNAETTAVAVDLRQFSTVTS------HSNRDGDEK-RQADESLRRVMYFNCWGQG

A0A6A1VB48 Uncharacterized protein9.4e-0845.65Show/hide
Query:  MSYLGRVWMAASVAVV--HGGQSDARRGSAEGILTLHRNAETTAVAVDLRQFSTVTSH------SNRDGDE-KRQADESLRRVMYFNCWGQG
        MSY+ RVWMAASVAVV  H  Q    +   + +    R   +   + D+R  S +          N D DE +RQADESLRRVMY NCWGQG
Subjt:  MSYLGRVWMAASVAVV--HGGQSDARRGSAEGILTLHRNAETTAVAVDLRQFSTVTSH------SNRDGDE-KRQADESLRRVMYFNCWGQG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G28240.1 Wound-responsive family protein3.5e-0738.2Show/hide
Query:  MSYLGRVWMAASVAVVHGGQSDARRGSAEGILTLHRNAETTAVAVDLRQFSTVTSHSNRDGDEKRQ------ADESLRRVMYFNCWGQG
        MSYL +VWMAAS   V  G +D       G+ + HR      ++ DLR  +      +    E+R+       DESLR+VMY NCW QG
Subjt:  MSYLGRVWMAASVAVVHGGQSDARRGSAEGILTLHRNAETTAVAVDLRQFSTVTSHSNRDGDEKRQ------ADESLRRVMYFNCWGQG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTATCTAGGTCGGGTATGGATGGCGGCGAGTGTAGCCGTAGTCCACGGCGGCCAATCGGACGCCCGCCGCGGATCGGCTGAAGGAATCTTAACTCTGCACCGAAA
TGCGGAAACAACCGCCGTAGCCGTTGATCTCCGCCAATTTTCAACAGTGACGAGTCACTCGAATCGCGATGGAGACGAGAAGAGGCAAGCCGATGAGTCTCTCCGCCGAG
TTATGTACTTCAATTGCTGGGGCCAAGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTATCTAGGTCGGGTATGGATGGCGGCGAGTGTAGCCGTAGTCCACGGCGGCCAATCGGACGCCCGCCGCGGATCGGCTGAAGGAATCTTAACTCTGCACCGAAA
TGCGGAAACAACCGCCGTAGCCGTTGATCTCCGCCAATTTTCAACAGTGACGAGTCACTCGAATCGCGATGGAGACGAGAAGAGGCAAGCCGATGAGTCTCTCCGCCGAG
TTATGTACTTCAATTGCTGGGGCCAAGGCTGA
Protein sequenceShow/hide protein sequence
MSYLGRVWMAASVAVVHGGQSDARRGSAEGILTLHRNAETTAVAVDLRQFSTVTSHSNRDGDEKRQADESLRRVMYFNCWGQG