; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh02G001490 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G001490
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionProtein of unknown function (DUF1218)
Genome locationCmo_Chr02:732805..734495
RNA-Seq ExpressionCmoCh02G001490
SyntenyCmoCh02G001490
Gene Ontology termsGO:0009855 - determination of bilateral symmetry (biological process)
GO:0010087 - phloem or xylem histogenesis (biological process)
GO:0010305 - leaf vascular tissue pattern formation (biological process)
GO:0010588 - cotyledon vascular tissue pattern formation (biological process)
GO:0005783 - endoplasmic reticulum (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004151872.1 uncharacterized protein LOC101212188 [Cucumis sativus]2.6e-4191.75Show/hide
Query:  MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCL
        MKLVGVL+CLL+VAMDIVAGLL IEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGG NCICS++ELEKSPPN+QISI CL
Subjt:  MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCL

XP_022947582.1 uncharacterized protein LOC111451405 [Cucurbita moschata]8.7e-45100Show/hide
Query:  MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCL
        MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCL
Subjt:  MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCL

XP_022971119.1 uncharacterized protein LOC111469886 [Cucurbita maxima]5.7e-4497.94Show/hide
Query:  MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCL
        MKLVGVLVCLL+VAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCIC KEELEKSPPNKQISIGCL
Subjt:  MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCL

XP_023533398.1 uncharacterized protein LOC111795298 [Cucurbita pepo subsp. pepo]1.1e-4498.97Show/hide
Query:  MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCL
        MKLVGVLVCLL+VAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCL
Subjt:  MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCL

XP_038902419.1 uncharacterized protein LOC120089064 [Benincasa hispida]2.0e-4191.75Show/hide
Query:  MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCL
        M+LVGVL+CLL+VAMDIVAGLL IEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGG NCICS+EELEKSPPNKQ+SI CL
Subjt:  MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCL

TrEMBL top hitse value%identityAlignment
A0A0A0LR43 Uncharacterized protein1.3e-4191.75Show/hide
Query:  MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCL
        MKLVGVL+CLL+VAMDIVAGLL IEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGG NCICS++ELEKSPPN+QISI CL
Subjt:  MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCL

A0A1S3C1S7 uncharacterized protein LOC1034959271.3e-4191.75Show/hide
Query:  MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCL
        MKLVGVL+CLL+VAMDIVAGLL IEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGG NCICS++ELEKSPPN+QISI CL
Subjt:  MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCL

A0A6J1CID0 uncharacterized protein LOC111011214 isoform X21.0e-3884.54Show/hide
Query:  MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCL
        MK+VGVL+CLL+VAMDIVAGLL IEA+IAQNKVK LRLWIFECR+PSEQAFKLGLGAAGLLGLAHIIANLLGG NCICS+EE++KSPPN+Q+S+ CL
Subjt:  MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCL

A0A6J1G6V2 uncharacterized protein LOC1114514054.2e-45100Show/hide
Query:  MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCL
        MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCL
Subjt:  MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCL

A0A6J1I7N7 uncharacterized protein LOC1114698862.7e-4497.94Show/hide
Query:  MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCL
        MKLVGVLVCLL+VAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCIC KEELEKSPPNKQISIGCL
Subjt:  MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G05291.1 Protein of unknown function (DUF1218)9.1e-0845.59Show/hide
Query:  VLVCL-LIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLG
        ++VC+ L V +DIVAG + ++A  AQ  VKH +L   EC+ PS+ AF LG+ A   L  AH+ AN++G
Subjt:  VLVCL-LIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLG

AT1G11500.1 Protein of unknown function (DUF1218)1.7e-0938.61Show/hide
Query:  VGVLVCLLIVAMDIVAGLLAIEADIAQNKV------KHLRLWIFEC-RDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGC
        +G LV ++I+  DI A +L IEA+IAQ+K       +H R     C R PS+ AF  G+ A  LL + H++AN+LGG   I SK++ +++  NK +++  
Subjt:  VGVLVCLLIVAMDIVAGLLAIEADIAQNKV------KHLRLWIFEC-RDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGC

Query:  L
        L
Subjt:  L

AT2G32280.1 Protein of unknown function (DUF1218)4.2e-2956.25Show/hide
Query:  KLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCL
        K+ G+LVCL+IV +D+ A +L I+A++AQN+VKH+RLW+FECR+PS+ AF+LGLGAA +L +AH++ NL+GG  CICS++E ++S   +QIS+ CL
Subjt:  KLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCL

AT4G21310.1 Protein of unknown function (DUF1218)6.1e-2861.7Show/hide
Query:  VGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCL
        VG  +C+LI+AMD+ AG+L IEA+IAQNKVKHL++WIFECRDPS  AFK GL A  LL LAH+ AN LGG  C+ S+++LEKS  NKQ+++  L
Subjt:  VGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTTGGTTGGCGTGTTGGTTTGTTTGCTGATTGTAGCTATGGATATTGTGGCTGGCTTGCTCGCCATCGAAGCTGATATTGCACAAAACAAGGTGAAGCACTTGCG
TCTGTGGATATTCGAGTGCAGAGACCCAAGTGAGCAGGCTTTCAAATTGGGGCTAGGAGCAGCAGGGCTGCTGGGATTAGCCCACATAATTGCTAATTTGTTGGGGGGTT
TCAATTGCATTTGCTCTAAGGAAGAGCTTGAGAAATCTCCCCCCAACAAACAGATCTCCATCGGATGCCTTGATGATGAAGATGAACTCTCACCGTCGCCGTCGCCGTCG
CCGTCCTCCTCGTCCGAAGAACTTGAATCCTCGCCCTTCCGTCGTTCTACAATCGCCGGGAATAGCCGTTGCCGTAGCTCTGGGCTCTGA
mRNA sequenceShow/hide mRNA sequence
AGTGTGTAAAGAAGCCTTTTCAACCCCATAAATAGACCCTTTTGTTCCACACCCTTTGCTTTGATAGAAAGAAGAAAAGGATACCATGAAGTTGGTTGGCGTGTTGGTTT
GTTTGCTGATTGTAGCTATGGATATTGTGGCTGGCTTGCTCGCCATCGAAGCTGATATTGCACAAAACAAGGTGAAGCACTTGCGTCTGTGGATATTCGAGTGCAGAGAC
CCAAGTGAGCAGGCTTTCAAATTGGGGCTAGGAGCAGCAGGGCTGCTGGGATTAGCCCACATAATTGCTAATTTGTTGGGGGGTTTCAATTGCATTTGCTCTAAGGAAGA
GCTTGAGAAATCTCCCCCCAACAAACAGATCTCCATCGGATGCCTTGATGATGAAGATGAACTCTCACCGTCGCCGTCGCCGTCGCCGTCCTCCTCGTCCGAAGAACTTG
AATCCTCGCCCTTCCGTCGTTCTACAATCGCCGGGAATAGCCGTTGCCGTAGCTCTGGGCTCTGA
Protein sequenceShow/hide protein sequence
MKLVGVLVCLLIVAMDIVAGLLAIEADIAQNKVKHLRLWIFECRDPSEQAFKLGLGAAGLLGLAHIIANLLGGFNCICSKEELEKSPPNKQISIGCLDDEDELSPSPSPS
PSSSSEELESSPFRRSTIAGNSRCRSSGL