; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh02G001940 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G001940
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationCmo_Chr02:915222..916253
RNA-Seq ExpressionCmoCh02G001940
SyntenyCmoCh02G001940
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604878.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia]2.4e-18499.42Show/hide
Query:  MKLGTARTSSFLLHFHQFLRQCSSVPSITPAQSLQESIRAAVESKSYQKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTHVVDEILQSLIPLRPRSRPQF
        MKLGTARTSSFLLHFHQFLRQCSSVPSITPAQSLQESIRAAVESKSYQ+LPDLFPSLQEACQNPNPFSFLSTFPVNFRTHVVDEILQSLIPLRPRSRPQF
Subjt:  MKLGTARTSSFLLHFHQFLRQCSSVPSITPAQSLQESIRAAVESKSYQKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTHVVDEILQSLIPLRPRSRPQF

Query:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQTHLLLSSVWLKQRRQSKSVASILLNMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA
        VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQTHLLLSSVWLKQRRQSKSVASILLNMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA
Subjt:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQTHLLLSSVWLKQRRQSKSVASILLNMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA

Query:  GCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRQGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV
        GCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRQGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLEC EYILAGKVV
Subjt:  GCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRQGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV

Query:  MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS
        MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS
Subjt:  MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS

XP_022140758.1 pentatricopeptide repeat-containing protein At1g06270 [Momordica charantia]6.5e-15886.3Show/hide
Query:  MKLGTARTSSFLLHFHQFLRQCSSVPSITPAQSLQESIRAAVESKSYQKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTHVVDEILQSLIPLRPRSRPQF
        MK GT   S+FLL FHQFLRQ SS+ +I+P+Q+LQESI+AAVESK Y+KLPDLFPSL++ACQNP+PFSFLST PVNF T VVDEILQSLIPLRPRSRPQ 
Subjt:  MKLGTARTSSFLLHFHQFLRQCSSVPSITPAQSLQESIRAAVESKSYQKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTHVVDEILQSLIPLRPRSRPQF

Query:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQTHLLLSSVWLKQRRQSKSVASILLNMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA
        V+ASLLFYTLQSPSPLPLSL VLQRILHSGCVP PQTHLLLSS WLKQR QSKSVA+ILL+MRSIGYEPDSSICNYLISSLCAIDELAEA QVLK MGGA
Subjt:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQTHLLLSSVWLKQRRQSKSVASILLNMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA

Query:  GCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRQGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV
        GC+PDLESYGTLI +STAVRRT EAVELLKEMVVKVKLTPRQGT+INVVAALRANREIRRAVEIIELLEKES+NVGFESYE+LVEGCL+CREYILAGKVV
Subjt:  GCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRQGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV

Query:  MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS
        MGMT++G+IPYIRVR KVVEGLA +GE ELASAVRRRFAELRS
Subjt:  MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS

XP_022947166.1 pentatricopeptide repeat-containing protein At1g06270 [Cucurbita moschata]2.8e-185100Show/hide
Query:  MKLGTARTSSFLLHFHQFLRQCSSVPSITPAQSLQESIRAAVESKSYQKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTHVVDEILQSLIPLRPRSRPQF
        MKLGTARTSSFLLHFHQFLRQCSSVPSITPAQSLQESIRAAVESKSYQKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTHVVDEILQSLIPLRPRSRPQF
Subjt:  MKLGTARTSSFLLHFHQFLRQCSSVPSITPAQSLQESIRAAVESKSYQKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTHVVDEILQSLIPLRPRSRPQF

Query:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQTHLLLSSVWLKQRRQSKSVASILLNMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA
        VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQTHLLLSSVWLKQRRQSKSVASILLNMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA
Subjt:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQTHLLLSSVWLKQRRQSKSVASILLNMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA

Query:  GCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRQGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV
        GCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRQGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV
Subjt:  GCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRQGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV

Query:  MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS
        MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS
Subjt:  MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS

XP_022971046.1 pentatricopeptide repeat-containing protein At1g06270 [Cucurbita maxima]2.1e-18097.38Show/hide
Query:  MKLGTARTSSFLLHFHQFLRQCSSVPSITPAQSLQESIRAAVESKSYQKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTHVVDEILQSLIPLRPRSRPQF
        MKLGTARTSSFLLHFHQFLR CSSVPSITPAQ+LQESI+AAVESKSY+KLPDLFPSLQEACQNPNPFSFLSTFPVNFRT VVDEILQSLIPLRPRSRPQF
Subjt:  MKLGTARTSSFLLHFHQFLRQCSSVPSITPAQSLQESIRAAVESKSYQKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTHVVDEILQSLIPLRPRSRPQF

Query:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQTHLLLSSVWLKQRRQSKSVASILLNMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA
        VHASLLFYTLQSPSPLPLSLPVLQRILHSGC PVPQTHLLLSS WLKQRRQSKSVASILL+MRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA
Subjt:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQTHLLLSSVWLKQRRQSKSVASILLNMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA

Query:  GCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRQGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV
        GCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPR+GTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV
Subjt:  GCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRQGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV

Query:  MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS
        MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS
Subjt:  MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS

XP_023533787.1 pentatricopeptide repeat-containing protein At1g06270 [Cucurbita pepo subsp. pepo]6.9e-18499.42Show/hide
Query:  MKLGTARTSSFLLHFHQFLRQCSSVPSITPAQSLQESIRAAVESKSYQKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTHVVDEILQSLIPLRPRSRPQF
        MKLGTARTSSFLLHFHQFLRQCSSVPSITPAQSLQESIRAAVESKSYQKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTHVVDEILQSLIPLRPRSRPQF
Subjt:  MKLGTARTSSFLLHFHQFLRQCSSVPSITPAQSLQESIRAAVESKSYQKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTHVVDEILQSLIPLRPRSRPQF

Query:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQTHLLLSSVWLKQRRQSKSVASILLNMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA
        VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQTHLLLSSVWLKQRRQSKSVASILL+MRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA
Subjt:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQTHLLLSSVWLKQRRQSKSVASILLNMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA

Query:  GCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRQGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV
        GCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRQGTVINVVAALRAN EIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV
Subjt:  GCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRQGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV

Query:  MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS
        MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS
Subjt:  MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS

TrEMBL top hitse value%identityAlignment
A0A0A0LFL3 Uncharacterized protein4.1e-15079.88Show/hide
Query:  MKLGTARTSSFLLHFHQFLRQCSSVPSITPAQSLQESIRAAVESKSYQKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTHVVDEILQSLIPLRPRSRPQF
        M +G  +TS+FLL+FH FL Q SS+ SI+P+Q+LQ+SI+AAVESKSY+KLPDLFPSLQEAC NPN F FLSTFP+N RT VVDEILQSLI +RPRS+ QF
Subjt:  MKLGTARTSSFLLHFHQFLRQCSSVPSITPAQSLQESIRAAVESKSYQKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTHVVDEILQSLIPLRPRSRPQF

Query:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQTHLLLSSVWLKQRRQSKSVASILLNMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA
        VH SLLFYTLQSPSP PLSLPVLQRILHSGCVP PQTH LLSS WLKQR Q+KSVA+IL++M+SIGY+PDS+ICNYLISSLC+I ELAEAFQVLKGMGGA
Subjt:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQTHLLLSSVWLKQRRQSKSVASILLNMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA

Query:  GCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRQGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV
        GC+PDLESYGTLI ++TAVRRT +AVELLKEMVVKVKL PRQGT+ NVVAALR NRE+RRAVEIIELLE++S++VGFESYE+LVEGCLECREYILAGKV 
Subjt:  GCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRQGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV

Query:  MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS
        MGMT++G+IPYI+VR +VVEGLAGIGE ELASAVRRRF EL S
Subjt:  MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS

A0A5D3D4C7 Pentatricopeptide repeat-containing protein7.0e-15080.17Show/hide
Query:  MKLGTARTSSFLLHFHQFLRQCSSVPSITPAQSLQESIRAAVESKSYQKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTHVVDEILQSLIPLRPRSRPQF
        M +G  +TS+FLL+FH FL QCSS+ SI+P+Q+LQ+SI+AAVESKSY+KLP LFPSLQEAC NPN F FLSTFP+N RT VVDEILQSLI +RPRS+ QF
Subjt:  MKLGTARTSSFLLHFHQFLRQCSSVPSITPAQSLQESIRAAVESKSYQKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTHVVDEILQSLIPLRPRSRPQF

Query:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQTHLLLSSVWLKQRRQSKSVASILLNMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA
        VH SLLFYTLQSPSP PLSLPVLQRILHSGCVP PQTH LLSS WLKQR Q+KSVA+IL++M+SIGY+PDS+ICNYLISSLC+I ELAEAFQVLKGMGGA
Subjt:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQTHLLLSSVWLKQRRQSKSVASILLNMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA

Query:  GCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRQGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV
        GCVPDLESYGTLI ++TAVRRT +AVELLKEMVVKVKL PRQ T+INVVAALRANRE+RRAVEIIELLE++S++VGFESYE+LVEGCLECREYILAGKV+
Subjt:  GCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRQGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV

Query:  MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS
        M MT++G+IPYI+VR KVVEGL GIGE ELASAVRRRF EL S
Subjt:  MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS

A0A6J1CIR0 pentatricopeptide repeat-containing protein At1g062703.1e-15886.3Show/hide
Query:  MKLGTARTSSFLLHFHQFLRQCSSVPSITPAQSLQESIRAAVESKSYQKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTHVVDEILQSLIPLRPRSRPQF
        MK GT   S+FLL FHQFLRQ SS+ +I+P+Q+LQESI+AAVESK Y+KLPDLFPSL++ACQNP+PFSFLST PVNF T VVDEILQSLIPLRPRSRPQ 
Subjt:  MKLGTARTSSFLLHFHQFLRQCSSVPSITPAQSLQESIRAAVESKSYQKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTHVVDEILQSLIPLRPRSRPQF

Query:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQTHLLLSSVWLKQRRQSKSVASILLNMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA
        V+ASLLFYTLQSPSPLPLSL VLQRILHSGCVP PQTHLLLSS WLKQR QSKSVA+ILL+MRSIGYEPDSSICNYLISSLCAIDELAEA QVLK MGGA
Subjt:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQTHLLLSSVWLKQRRQSKSVASILLNMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA

Query:  GCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRQGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV
        GC+PDLESYGTLI +STAVRRT EAVELLKEMVVKVKLTPRQGT+INVVAALRANREIRRAVEIIELLEKES+NVGFESYE+LVEGCL+CREYILAGKVV
Subjt:  GCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRQGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV

Query:  MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS
        MGMT++G+IPYIRVR KVVEGLA +GE ELASAVRRRFAELRS
Subjt:  MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS

A0A6J1G5M7 pentatricopeptide repeat-containing protein At1g062701.4e-185100Show/hide
Query:  MKLGTARTSSFLLHFHQFLRQCSSVPSITPAQSLQESIRAAVESKSYQKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTHVVDEILQSLIPLRPRSRPQF
        MKLGTARTSSFLLHFHQFLRQCSSVPSITPAQSLQESIRAAVESKSYQKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTHVVDEILQSLIPLRPRSRPQF
Subjt:  MKLGTARTSSFLLHFHQFLRQCSSVPSITPAQSLQESIRAAVESKSYQKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTHVVDEILQSLIPLRPRSRPQF

Query:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQTHLLLSSVWLKQRRQSKSVASILLNMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA
        VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQTHLLLSSVWLKQRRQSKSVASILLNMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA
Subjt:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQTHLLLSSVWLKQRRQSKSVASILLNMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA

Query:  GCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRQGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV
        GCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRQGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV
Subjt:  GCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRQGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV

Query:  MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS
        MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS
Subjt:  MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS

A0A6J1I5P5 pentatricopeptide repeat-containing protein At1g062701.0e-18097.38Show/hide
Query:  MKLGTARTSSFLLHFHQFLRQCSSVPSITPAQSLQESIRAAVESKSYQKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTHVVDEILQSLIPLRPRSRPQF
        MKLGTARTSSFLLHFHQFLR CSSVPSITPAQ+LQESI+AAVESKSY+KLPDLFPSLQEACQNPNPFSFLSTFPVNFRT VVDEILQSLIPLRPRSRPQF
Subjt:  MKLGTARTSSFLLHFHQFLRQCSSVPSITPAQSLQESIRAAVESKSYQKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTHVVDEILQSLIPLRPRSRPQF

Query:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQTHLLLSSVWLKQRRQSKSVASILLNMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA
        VHASLLFYTLQSPSPLPLSLPVLQRILHSGC PVPQTHLLLSS WLKQRRQSKSVASILL+MRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA
Subjt:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQTHLLLSSVWLKQRRQSKSVASILLNMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGA

Query:  GCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRQGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV
        GCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPR+GTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV
Subjt:  GCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRQGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV

Query:  MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS
        MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS
Subjt:  MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS

SwissProt top hitse value%identityAlignment
Q0WPZ6 Pentatricopeptide repeat-containing protein At2g171405.2e-0926.1Show/hide
Query:  PQFVHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQT-HLLLSSVWLKQRRQSKSVASILLNMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKG
        P  V    L +   S   +  +  +LQ ++ + C+P   T ++LL S+W K  R S++   +L  M   GY  D+  CN ++  LC   EL +A +++KG
Subjt:  PQFVHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQT-HLLLSSVWLKQRRQSKSVASILLNMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKG

Query:  M--------GGAG---------------CVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRQGTVINVVAALRANREIRRAVEIIELLEKESY
        M        G  G               C+PDL +Y TL++      R AEA  L  EM+ + KL P        +       +I  A  +++ +EK+  
Subjt:  M--------GGAG---------------CVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRQGTVINVVAALRANREIRRAVEIIELLEKESY

Query:  NVGFESYEILVEGCLECREYILAGKVVMGMTEKGYIPYIRVRHKVVEGL
        +   E+Y  L+ G     +      ++  M EKG  P I   +  ++ L
Subjt:  NVGFESYEILVEGCLECREYILAGKVVMGMTEKGYIPYIRVRHKVVEGL

Q3EDF8 Pentatricopeptide repeat-containing protein At1g099001.2e-0823.71Show/hide
Query:  LRPRSRPQFVHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQTHLLLSSVWLKQRRQSKSVASILLNMRSIGYEPDSSICNYLISSLCAIDELAEAF
        LR    P  V  ++L   L     L  ++ +L+++   GC P   ++  L   + K+++  +++   L  M S G  PD    N ++++LC   ++ +A 
Subjt:  LRPRSRPQFVHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQTHLLLSSVWLKQRRQSKSVASILLNMRSIGYEPDSSICNYLISSLCAIDELAEAF

Query:  QVLKGMGGAGCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRQGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECR
        ++L  +   GC P L +Y T+I       +T +A++LL EM  K  L P   T  ++V  L    ++  A++     E+        ++  ++ G  + R
Subjt:  QVLKGMGGAGCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRQGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECR

Query:  EYILAGKVVMGMTEKGYIPYIRVRHKVVEGLA
        +   A   ++ M  +G  P       ++EGLA
Subjt:  EYILAGKVVMGMTEKGYIPYIRVRHKVVEGLA

Q9LFF1 Pentatricopeptide repeat-containing protein At3g53700, chloroplastic2.8e-1025.89Show/hide
Query:  LQEACQNPNPFSFLSTFPVNFRTHVVDEILQSLIPLRPRS-RPQFVHASLLFYTLQSPSPLPLSLPVLQRILHSGCVP-VPQTHLLLSSVWLKQRRQSKS
        LQE   +P+ +++ S      +   V E ++ L  +  R   P  V  + L  TL   + +  +  + + +   G +P V   + L+  + L   R  + 
Subjt:  LQEACQNPNPFSFLSTFPVNFRTHVVDEILQSLIPLRPRS-RPQFVHASLLFYTLQSPSPLPLSLPVLQRILHSGCVP-VPQTHLLLSSVWLKQRRQSKS

Query:  VASILLNMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRQGTVINVVAALRA
           +   MRS G EPD    N LI SLC+  +L EA  +LK M  +GC   + +Y TLI       +T EA E+  EM V   ++    T   ++  L  
Subjt:  VASILLNMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRQGTVINVVAALRA

Query:  NREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVVMGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRR
        +R +  A ++++ +  E       +Y  L+       +   A  +V  MT  G  P I     ++ GL   G  E+AS + R
Subjt:  NREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVVMGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRR

Q9LNC0 Pentatricopeptide repeat-containing protein At1g062703.0e-9757.1Show/hide
Query:  SITPAQSLQESIRAAVESKSYQKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTHVVDEILQSLIPLRPRSRPQFVHASLLFYTLQSPSPLPLSLPVLQRI
        SI+  ++++++I+ AVE+K Y ++P+L  SL+E  QN   FSFLS F  + R  V+DEILQS +P+RPRS P+ V++SLL Y LQS  PLPLS  +LQR 
Subjt:  SITPAQSLQESIRAAVESKSYQKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTHVVDEILQSLIPLRPRSRPQFVHASLLFYTLQSPSPLPLSLPVLQRI

Query:  LHSGCVPVPQTHLLLSSVWLKQRRQSKSVASILLNMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISSSTAVRRTAEAV
        L SGC+P PQTHLLLS  WL++RR S+SVA I+  M+ IGY PD+  CNYL+SSLCA+D+L EA +V++ M  AGC+PD+ESYG +I+S    R+T + V
Subjt:  LHSGCVPVPQTHLLLSSVWLKQRRQSKSVASILLNMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISSSTAVRRTAEAV

Query:  ELLKEMVVKVKLTPRQGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVVMGMTEKGYIPYIRVRHKVVEGLAGIG
        +++KEMV K  ++PR+G +  V AALRANREI +A+E+IE +E   Y V FESYE++VEGCLE REYILAGKVVM MT++G+IPYI+VR KVVE L  IG
Subjt:  ELLKEMVVKVKLTPRQGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVVMGMTEKGYIPYIRVRHKVVEGLAGIG

Query:  ETELASAVRRRFAELRS
        E +LA  VR+R +ELRS
Subjt:  ETELASAVRRRFAELRS

Q9SZ52 Pentatricopeptide repeat-containing protein At4g31850, chloroplastic3.4e-0825Show/hide
Query:  SLPVLQRILHSGCVPVPQTHLLLSSVWLKQRRQSKSVASILLNMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISSSTA
        ++ V +R++  G  P  QT+  L  V L +RR   SV  +L  M ++G +P+       I  L    ++ EA+++LK M   GC PD+ +Y  LI +   
Subjt:  SLPVLQRILHSGCVPVPQTHLLLSSVWLKQRRQSKSVASILLNMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISSSTA

Query:  VRRTAEAVELLKEMVVKVKLTPRQGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVVMGMTEKGYIPYIRVRHKV
         R+   A E+ ++M    +  P + T I ++     NR++    +    +EK+ +     ++ ILV+   +   +  A   +  M ++G +P +   + +
Subjt:  VRRTAEAVELLKEMVVKVKLTPRQGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVVMGMTEKGYIPYIRVRHKV

Query:  VEGL
        + GL
Subjt:  VEGL

Arabidopsis top hitse value%identityAlignment
AT1G06270.1 Pentatricopeptide repeat (PPR) superfamily protein2.1e-9857.1Show/hide
Query:  SITPAQSLQESIRAAVESKSYQKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTHVVDEILQSLIPLRPRSRPQFVHASLLFYTLQSPSPLPLSLPVLQRI
        SI+  ++++++I+ AVE+K Y ++P+L  SL+E  QN   FSFLS F  + R  V+DEILQS +P+RPRS P+ V++SLL Y LQS  PLPLS  +LQR 
Subjt:  SITPAQSLQESIRAAVESKSYQKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTHVVDEILQSLIPLRPRSRPQFVHASLLFYTLQSPSPLPLSLPVLQRI

Query:  LHSGCVPVPQTHLLLSSVWLKQRRQSKSVASILLNMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISSSTAVRRTAEAV
        L SGC+P PQTHLLLS  WL++RR S+SVA I+  M+ IGY PD+  CNYL+SSLCA+D+L EA +V++ M  AGC+PD+ESYG +I+S    R+T + V
Subjt:  LHSGCVPVPQTHLLLSSVWLKQRRQSKSVASILLNMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISSSTAVRRTAEAV

Query:  ELLKEMVVKVKLTPRQGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVVMGMTEKGYIPYIRVRHKVVEGLAGIG
        +++KEMV K  ++PR+G +  V AALRANREI +A+E+IE +E   Y V FESYE++VEGCLE REYILAGKVVM MT++G+IPYI+VR KVVE L  IG
Subjt:  ELLKEMVVKVKLTPRQGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVVMGMTEKGYIPYIRVRHKVVEGLAGIG

Query:  ETELASAVRRRFAELRS
        E +LA  VR+R +ELRS
Subjt:  ETELASAVRRRFAELRS

AT1G09900.1 Pentatricopeptide repeat (PPR-like) superfamily protein8.2e-1023.71Show/hide
Query:  LRPRSRPQFVHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQTHLLLSSVWLKQRRQSKSVASILLNMRSIGYEPDSSICNYLISSLCAIDELAEAF
        LR    P  V  ++L   L     L  ++ +L+++   GC P   ++  L   + K+++  +++   L  M S G  PD    N ++++LC   ++ +A 
Subjt:  LRPRSRPQFVHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQTHLLLSSVWLKQRRQSKSVASILLNMRSIGYEPDSSICNYLISSLCAIDELAEAF

Query:  QVLKGMGGAGCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRQGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECR
        ++L  +   GC P L +Y T+I       +T +A++LL EM  K  L P   T  ++V  L    ++  A++     E+        ++  ++ G  + R
Subjt:  QVLKGMGGAGCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRQGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECR

Query:  EYILAGKVVMGMTEKGYIPYIRVRHKVVEGLA
        +   A   ++ M  +G  P       ++EGLA
Subjt:  EYILAGKVVMGMTEKGYIPYIRVRHKVVEGLA

AT2G17140.1 Pentatricopeptide repeat (PPR) superfamily protein3.7e-1026.1Show/hide
Query:  PQFVHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQT-HLLLSSVWLKQRRQSKSVASILLNMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKG
        P  V    L +   S   +  +  +LQ ++ + C+P   T ++LL S+W K  R S++   +L  M   GY  D+  CN ++  LC   EL +A +++KG
Subjt:  PQFVHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQT-HLLLSSVWLKQRRQSKSVASILLNMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKG

Query:  M--------GGAG---------------CVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRQGTVINVVAALRANREIRRAVEIIELLEKESY
        M        G  G               C+PDL +Y TL++      R AEA  L  EM+ + KL P        +       +I  A  +++ +EK+  
Subjt:  M--------GGAG---------------CVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRQGTVINVVAALRANREIRRAVEIIELLEKESY

Query:  NVGFESYEILVEGCLECREYILAGKVVMGMTEKGYIPYIRVRHKVVEGL
        +   E+Y  L+ G     +      ++  M EKG  P I   +  ++ L
Subjt:  NVGFESYEILVEGCLECREYILAGKVVMGMTEKGYIPYIRVRHKVVEGL

AT3G53700.1 Pentatricopeptide repeat (PPR) superfamily protein2.0e-1125.89Show/hide
Query:  LQEACQNPNPFSFLSTFPVNFRTHVVDEILQSLIPLRPRS-RPQFVHASLLFYTLQSPSPLPLSLPVLQRILHSGCVP-VPQTHLLLSSVWLKQRRQSKS
        LQE   +P+ +++ S      +   V E ++ L  +  R   P  V  + L  TL   + +  +  + + +   G +P V   + L+  + L   R  + 
Subjt:  LQEACQNPNPFSFLSTFPVNFRTHVVDEILQSLIPLRPRS-RPQFVHASLLFYTLQSPSPLPLSLPVLQRILHSGCVP-VPQTHLLLSSVWLKQRRQSKS

Query:  VASILLNMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRQGTVINVVAALRA
           +   MRS G EPD    N LI SLC+  +L EA  +LK M  +GC   + +Y TLI       +T EA E+  EM V   ++    T   ++  L  
Subjt:  VASILLNMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTPRQGTVINVVAALRA

Query:  NREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVVMGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRR
        +R +  A ++++ +  E       +Y  L+       +   A  +V  MT  G  P I     ++ GL   G  E+AS + R
Subjt:  NREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVVMGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRR

AT4G31850.1 proton gradient regulation 32.4e-0925Show/hide
Query:  SLPVLQRILHSGCVPVPQTHLLLSSVWLKQRRQSKSVASILLNMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISSSTA
        ++ V +R++  G  P  QT+  L  V L +RR   SV  +L  M ++G +P+       I  L    ++ EA+++LK M   GC PD+ +Y  LI +   
Subjt:  SLPVLQRILHSGCVPVPQTHLLLSSVWLKQRRQSKSVASILLNMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISSSTA

Query:  VRRTAEAVELLKEMVVKVKLTPRQGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVVMGMTEKGYIPYIRVRHKV
         R+   A E+ ++M    +  P + T I ++     NR++    +    +EK+ +     ++ ILV+   +   +  A   +  M ++G +P +   + +
Subjt:  VRRTAEAVELLKEMVVKVKLTPRQGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVVMGMTEKGYIPYIRVRHKV

Query:  VEGL
        + GL
Subjt:  VEGL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACTTGGAACTGCAAGGACTTCTTCGTTTTTACTCCATTTCCATCAGTTTTTGCGGCAATGTTCTTCAGTCCCCTCAATAACTCCAGCACAATCGCTTCAAGAAAG
CATTAGAGCTGCAGTTGAATCAAAGTCATATCAGAAACTTCCAGATTTGTTTCCTTCTTTACAAGAAGCTTGCCAAAACCCCAATCCTTTCTCGTTTCTCTCTACTTTTC
CTGTTAACTTTAGAACACACGTTGTGGATGAGATATTGCAATCTTTAATCCCTCTCAGACCTCGCTCAAGGCCACAGTTTGTCCATGCCTCTCTGCTTTTCTATACTCTT
CAAAGCCCTTCACCGCTTCCCCTCTCTCTTCCAGTTCTCCAGCGGATTCTCCACTCTGGTTGTGTTCCTGTCCCTCAGACCCACCTTCTCCTCTCTTCTGTATGGCTAAA
ACAACGTCGCCAGTCTAAGTCTGTTGCTAGCATCTTGTTGAACATGCGGTCGATTGGATATGAGCCTGATAGCAGCATATGTAATTATCTTATATCCTCTCTTTGTGCCA
TTGATGAGTTAGCTGAGGCATTTCAAGTCTTGAAGGGTATGGGGGGAGCAGGATGCGTCCCTGACTTGGAGAGTTATGGCACTTTAATTAGTTCATCAACAGCAGTTAGA
CGGACAGCTGAGGCAGTGGAACTGCTGAAAGAAATGGTTGTAAAAGTTAAGTTGACACCAAGACAAGGAACGGTCATTAACGTTGTGGCTGCATTACGAGCAAACCGAGA
GATAAGGAGAGCAGTTGAGATCATTGAGCTGTTGGAGAAGGAGAGTTACAATGTTGGATTTGAGAGTTATGAGATTCTTGTTGAAGGTTGTCTGGAGTGTCGTGAGTATA
TTTTAGCAGGAAAGGTGGTCATGGGGATGACAGAGAAAGGGTATATACCATATATCAGGGTCAGACATAAGGTTGTCGAGGGGCTGGCTGGTATTGGAGAGACGGAACTG
GCATCTGCTGTGAGACGCAGGTTTGCTGAGTTGAGGTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAACTTGGAACTGCAAGGACTTCTTCGTTTTTACTCCATTTCCATCAGTTTTTGCGGCAATGTTCTTCAGTCCCCTCAATAACTCCAGCACAATCGCTTCAAGAAAG
CATTAGAGCTGCAGTTGAATCAAAGTCATATCAGAAACTTCCAGATTTGTTTCCTTCTTTACAAGAAGCTTGCCAAAACCCCAATCCTTTCTCGTTTCTCTCTACTTTTC
CTGTTAACTTTAGAACACACGTTGTGGATGAGATATTGCAATCTTTAATCCCTCTCAGACCTCGCTCAAGGCCACAGTTTGTCCATGCCTCTCTGCTTTTCTATACTCTT
CAAAGCCCTTCACCGCTTCCCCTCTCTCTTCCAGTTCTCCAGCGGATTCTCCACTCTGGTTGTGTTCCTGTCCCTCAGACCCACCTTCTCCTCTCTTCTGTATGGCTAAA
ACAACGTCGCCAGTCTAAGTCTGTTGCTAGCATCTTGTTGAACATGCGGTCGATTGGATATGAGCCTGATAGCAGCATATGTAATTATCTTATATCCTCTCTTTGTGCCA
TTGATGAGTTAGCTGAGGCATTTCAAGTCTTGAAGGGTATGGGGGGAGCAGGATGCGTCCCTGACTTGGAGAGTTATGGCACTTTAATTAGTTCATCAACAGCAGTTAGA
CGGACAGCTGAGGCAGTGGAACTGCTGAAAGAAATGGTTGTAAAAGTTAAGTTGACACCAAGACAAGGAACGGTCATTAACGTTGTGGCTGCATTACGAGCAAACCGAGA
GATAAGGAGAGCAGTTGAGATCATTGAGCTGTTGGAGAAGGAGAGTTACAATGTTGGATTTGAGAGTTATGAGATTCTTGTTGAAGGTTGTCTGGAGTGTCGTGAGTATA
TTTTAGCAGGAAAGGTGGTCATGGGGATGACAGAGAAAGGGTATATACCATATATCAGGGTCAGACATAAGGTTGTCGAGGGGCTGGCTGGTATTGGAGAGACGGAACTG
GCATCTGCTGTGAGACGCAGGTTTGCTGAGTTGAGGTCTTAG
Protein sequenceShow/hide protein sequence
MKLGTARTSSFLLHFHQFLRQCSSVPSITPAQSLQESIRAAVESKSYQKLPDLFPSLQEACQNPNPFSFLSTFPVNFRTHVVDEILQSLIPLRPRSRPQFVHASLLFYTL
QSPSPLPLSLPVLQRILHSGCVPVPQTHLLLSSVWLKQRRQSKSVASILLNMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISSSTAVR
RTAEAVELLKEMVVKVKLTPRQGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVVMGMTEKGYIPYIRVRHKVVEGLAGIGETEL
ASAVRRRFAELRS