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CmoCh02G002090 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G002090
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1
Genome locationCmo_Chr02:979371..981474
RNA-Seq ExpressionCmoCh02G002090
SyntenyCmoCh02G002090
Gene Ontology termsGO:0000741 - karyogamy (biological process)
InterPro domainsIPR033251 - Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial
IPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7026975.1 Protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]3.6e-3998.91Show/hide
Query:  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEGS
        MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG+
Subjt:  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEGS

XP_022947067.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucurbita moschata]3.6e-39100Show/hide
Query:  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG
        MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG
Subjt:  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG

XP_022947068.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 [Cucurbita moschata]3.6e-39100Show/hide
Query:  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG
        MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG
Subjt:  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG

XP_022971141.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucurbita maxima]2.3e-3897.8Show/hide
Query:  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG
        MASIGARSVFRS SGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAA+MISMLSISRRSCGWLPEG
Subjt:  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG

XP_023534316.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucurbita pepo subsp. pepo]3.6e-39100Show/hide
Query:  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG
        MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG
Subjt:  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG

TrEMBL top hitse value%identityAlignment
A0A6J1CIN8 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X33.8e-3490.11Show/hide
Query:  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG
        MAS+GARSVFRS SGSARRAAAHIGS+AR+SS SPFRMATNKPLSHRTFRCAAEMSFCLES+MPFHSASS+ALM SMLSISR SCGWLPEG
Subjt:  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG

A0A6J1G5E8 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X11.8e-39100Show/hide
Query:  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG
        MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG
Subjt:  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG

A0A6J1G5L1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X21.8e-39100Show/hide
Query:  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG
        MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG
Subjt:  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG

A0A6J1I155 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X21.1e-3897.8Show/hide
Query:  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG
        MASIGARSVFRS SGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAA+MISMLSISRRSCGWLPEG
Subjt:  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG

A0A6J1I2H5 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X11.1e-3897.8Show/hide
Query:  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG
        MASIGARSVFRS SGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAA+MISMLSISRRSCGWLPEG
Subjt:  MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG

SwissProt top hitse value%identityAlignment
Q93ZJ3 Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial2.9e-0742.05Show/hide
Query:  GARSVFRSLSGSARRAAAHIGSQARSSSGSP--FRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPE
        GARS+ R  + S+R AAA  G  A  +  +P  FR    +       R   E+SFC+ES++P+HSA+++ALM S LSIS ++ GWL +
Subjt:  GARSVFRSLSGSARRAAAHIGSQARSSSGSP--FRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPE

Arabidopsis top hitse value%identityAlignment
AT1G28395.1 unknown protein7.6e-1142.7Show/hide
Query:  ARSVFRSLSGSARRAAAHIGSQAR---SSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG
        ARSVFRS +  A   A    +  +   SS+ + FRM    PL++R FR   E+S C+E+++P+H+A+++AL+ SMLS+SRR  GW+ +G
Subjt:  ARSVFRSLSGSARRAAAHIGSQAR---SSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG

AT1G28395.2 unknown protein7.6e-1142.7Show/hide
Query:  ARSVFRSLSGSARRAAAHIGSQAR---SSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG
        ARSVFRS +  A   A    +  +   SS+ + FRM    PL++R FR   E+S C+E+++P+H+A+++AL+ SMLS+SRR  GW+ +G
Subjt:  ARSVFRSLSGSARRAAAHIGSQAR---SSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG

AT1G28395.3 unknown protein7.6e-1142.7Show/hide
Query:  ARSVFRSLSGSARRAAAHIGSQAR---SSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG
        ARSVFRS +  A   A    +  +   SS+ + FRM    PL++R FR   E+S C+E+++P+H+A+++AL+ SMLS+SRR  GW+ +G
Subjt:  ARSVFRSLSGSARRAAAHIGSQAR---SSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEG

AT2G33847.1 unknown protein9.9e-1148.1Show/hide
Query:  ARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRS
        ARSVFRS  G A  AA        SS+ S F++    PLSHR FR   E+S C+E+++P+H+A+++AL+ SMLS+S RS
Subjt:  ARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRS

AT2G33847.2 unknown protein4.4e-1145.98Show/hide
Query:  ARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEGS
        ARSVFRS  G A  AA        SS+ S F++    PLSHR FR   E+S C+E+++P+H+A+++AL+ SMLS+S RS  W  +G+
Subjt:  ARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCAATTGGCGCTAGATCCGTTTTCCGATCACTTTCCGGCTCTGCTCGCCGTGCTGCTGCTCACATTGGTTCTCAAGCCCGTTCATCGTCAGGCTCTCCCTTTCG
AATGGCAACTAACAAGCCCCTCTCTCATCGAACTTTCAGGTGTGCGGCTGAGATGAGCTTCTGTTTGGAGTCGATAATGCCGTTTCACTCTGCGTCGTCGGCAGCTTTGA
TGATTTCAATGCTCTCTATCTCACGCCGCAGCTGCGGTTGGCTTCCCGAAGGTAGCTAG
mRNA sequenceShow/hide mRNA sequence
TTACGAAATCACCCCTTTCCAAGGAATTATTCCCATAGTAGAAACCTCTTAGACTGGAAGTAGGGTTTTAGCGTTAACCCTCGCCGGCAACGAAGCAAGACTCGAGTTCT
TTCAGAATCTATCATTTCTTCTGAGTAACAATGGCCTCAATTGGCGCTAGATCCGTTTTCCGATCACTTTCCGGCTCTGCTCGCCGTGCTGCTGCTCACATTGGTTCTCA
AGCCCGTTCATCGTCAGGCTCTCCCTTTCGAATGGCAACTAACAAGCCCCTCTCTCATCGAACTTTCAGGTGTGCGGCTGAGATGAGCTTCTGTTTGGAGTCGATAATGC
CGTTTCACTCTGCGTCGTCGGCAGCTTTGATGATTTCAATGCTCTCTATCTCACGCCGCAGCTGCGGTTGGCTTCCCGAAGGTAGCTAGCACACTTTATAGGCCCATTGA
TGTTCTTCTTGCCTTCTTGTTGCTCTGGCAAAGACAAGACTAGATGAGGATCGGGAAGCAGGAAGGAATGACTCTTGAGTTGTTTTCTGAGTTTCACCTTTTAAGTCCTA
GGCGTTGCATACCCCCCTGCCCCGCCCTTCAGACAAAAAAGAATAAAAAAACCATAGGCGATGATATCATCAATAGGTTAGATGAGATTATTGTATTTGGAATGAAGTAA
TAGACTGTGGTATTCTATTCAGTTCTTTGTATTTGTAGATTGTTGTCTTTTGAAGTGTTATGGATTATTTATACAATTTAATTCTGCAACTATATGGGGTTACAGATTAC
TAGATCCTTGCCGAATAAATTTTGCTTCTAAATAGCTTATTGTTTGCTGTTTTGCAAAATTTACTTTGATCTCAAGTATTTGGTGCACTACTTCATATAGATGGGGGTGG
CAAACTCAATTATATTACTCTGACCATCAAGTACCATGGAAATCAGAGTGAAACCAGGGATATAAAGAAGAACATAGGCTAGACTTTATTAGTAACAAGTAAATCCTTTG
CTTTGGACATAAAAAAGTATCAACATTTTGGGGG
Protein sequenceShow/hide protein sequence
MASIGARSVFRSLSGSARRAAAHIGSQARSSSGSPFRMATNKPLSHRTFRCAAEMSFCLESIMPFHSASSAALMISMLSISRRSCGWLPEGS