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CmoCh02G002190 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G002190
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionfibrous sheath CABYR-binding protein-like
Genome locationCmo_Chr02:1007434..1008363
RNA-Seq ExpressionCmoCh02G002190
SyntenyCmoCh02G002190
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604898.1 hypothetical protein SDJN03_02215, partial [Cucurbita argyrosperma subsp. sororia]1.2e-3989.17Show/hide
Query:  MATAEVVTQEAALQEEVTEVEVPPLKVEEEA------PAEEVAKEEAAEVAEPPVAVETKEVVA-EEEEEEEAKEEVVEEKKEVEAAEVEAEEKEEAAAE
        MATAEVVTQEAALQEEVTEV+VPPLKVEEEA      PAEE+AKEEAAEVAEPPV VETKEVVA EEEEEEEAKEEVVEEKKEVEAAEVEAEEKEEA AE
Subjt:  MATAEVVTQEAALQEEVTEVEVPPLKVEEEA------PAEEVAKEEAAEVAEPPVAVETKEVVA-EEEEEEEAKEEVVEEKKEVEAAEVEAEEKEEAAAE

Query:  SEPAVAA-----EEEEEEAKPEAEPAAEEEAVEVKETAAEEAEEKPAEEEQAAEKAE
        SEPAVAA     EEEEEEAKPEAEPAAEEEAVEVKETAAEEAEEKPAEEE AAEKAE
Subjt:  SEPAVAA-----EEEEEEAKPEAEPAAEEEAVEVKETAAEEAEEKPAEEEQAAEKAE

XP_022947684.1 enolase-phosphatase E1-like [Cucurbita moschata]2.0e-47100Show/hide
Query:  MATAEVVTQEAALQEEVTEVEVPPLKVEEEAPAEEVAKEEAAEVAEPPVAVETKEVVAEEEEEEEAKEEVVEEKKEVEAAEVEAEEKEEAAAESEPAVAA
        MATAEVVTQEAALQEEVTEVEVPPLKVEEEAPAEEVAKEEAAEVAEPPVAVETKEVVAEEEEEEEAKEEVVEEKKEVEAAEVEAEEKEEAAAESEPAVAA
Subjt:  MATAEVVTQEAALQEEVTEVEVPPLKVEEEAPAEEVAKEEAAEVAEPPVAVETKEVVAEEEEEEEAKEEVVEEKKEVEAAEVEAEEKEEAAAESEPAVAA

Query:  EEEEEEAKPEAEPAAEEEAVEVKETAAEEAEEKPAEEEQAAEKAE
        EEEEEEAKPEAEPAAEEEAVEVKETAAEEAEEKPAEEEQAAEKAE
Subjt:  EEEEEEAKPEAEPAAEEEAVEVKETAAEEAEEKPAEEEQAAEKAE

XP_022971120.1 fibrous sheath CABYR-binding protein-like [Cucurbita maxima]6.3e-3888.89Show/hide
Query:  MATAEVVTQEAALQEEVTEVEVPPLKVEEEA------PAEEVAKEEAAEVAEPPVAVETKEVVAEEEEEEEAKEEVVEEKKEVEAAEVEAEEKEEAAAES
        MATAEVVTQE ALQEEVTEVEVPPLKVEEEA      PAEEVAKEEAAEVAEPPV VETKEVVA +EEEEEAKEEVVEEKKEVEAAEVEAEEKEEA AES
Subjt:  MATAEVVTQEAALQEEVTEVEVPPLKVEEEA------PAEEVAKEEAAEVAEPPVAVETKEVVAEEEEEEEAKEEVVEEKKEVEAAEVEAEEKEEAAAES

Query:  EPAVA--AEEEEEEAKPEAEPAAEEEAVEVKETAAEEAEEKPAEEEQAAEKAE
        EPAVA   EEEEEEAKPEAEPAAEEEA EVKET AEEAEEKPAEEE AAEKAE
Subjt:  EPAVA--AEEEEEEAKPEAEPAAEEEAVEVKETAAEEAEEKPAEEEQAAEKAE

XP_023532510.1 neurofilament medium polypeptide-like [Cucurbita pepo subsp. pepo]3.8e-2794.39Show/hide
Query:  MATAEVVTQEAALQEEV-TEVEVPPLKVEEEAPAEEVAKEEAAEVAEPPVAVETKEVVAEEEEEEEAKEEVVEEKKEVEAAEVEAEEKEEAAAESEPAVA
        MATAEVVTQEAALQEEV TEVEVPPLKVEEEAPAEEVAKEEAAEVAEPPV VETKEVVA EEEEEEA+EEVVEEKKEVEAAEVEAEEKEEA AESEPAVA
Subjt:  MATAEVVTQEAALQEEV-TEVEVPPLKVEEEAPAEEVAKEEAAEVAEPPVAVETKEVVAEEEEEEEAKEEVVEEKKEVEAAEVEAEEKEEAAAESEPAVA

Query:  AEEEEEE
        AEEEEE+
Subjt:  AEEEEEE

XP_023534310.1 uncharacterized protein LOC111795906 [Cucurbita pepo subsp. pepo]1.2e-3993.88Show/hide
Query:  MATAEVVTQEAALQEEV-TEVEVPPLKVEEEAPAEEVAKEEAAEVAEPPVAVETKEVVAEEEEEEEAKEEVVEEKKEVEAAEVEAEEKEEAAAESEPAVA
        MATAEVVTQEAALQEEV TEVEVPPLKVEEEAPAEEVAKEEAAEVAEPPV VETKEVVA EEEEEEA+EEVVEEKKEVEAAEVEAEEKEEA AESEPAVA
Subjt:  MATAEVVTQEAALQEEV-TEVEVPPLKVEEEAPAEEVAKEEAAEVAEPPVAVETKEVVAEEEEEEEAKEEVVEEKKEVEAAEVEAEEKEEAAAESEPAVA

Query:  -AEEEEEEAKPEAEPAAEEEAVEVKETAAEEAEEKPAEEEQAAEKAE
          EEEEEEAKPEAEPAAEEEAVEVKETAAEEAEEKPAEEE AAEK E
Subjt:  -AEEEEEEAKPEAEPAAEEEAVEVKETAAEEAEEKPAEEEQAAEKAE

TrEMBL top hitse value%identityAlignment
A0A0A0KAS3 Uncharacterized protein1.3e-0456.44Show/hide
Query:  MATAEVVTQEAALQEEVT---EVEVPPLKVEEE---------APAEEVAKEE------AAEVAEPPVAVETKEVVAEEEEEEEAKEEVVEEKKEVEAAEV
        MATAEVVT E AL EE T   EVEVPP KVEEE          PAEEVAKEE      A E AE PV VETKEVV EEE +EE  EE     +EV    V
Subjt:  MATAEVVTQEAALQEEVT---EVEVPPLKVEEE---------APAEEVAKEE------AAEVAEPPVAVETKEVVAEEEEEEEAKEEVVEEKKEVEAAEV

Query:  EAEEKEEAAAESEPAVAAEEEEEEAKPEAEPAAEEEAVEVKETAAEEAEEKPAEEEQAAEKAE
        E EEKEE   E    V  EEE +    E    AEE+AVEVK   AEEAEEK AEEE  AEK E
Subjt:  EAEEKEEAAAESEPAVAAEEEEEEAKPEAEPAAEEEAVEVKETAAEEAEEKPAEEEQAAEKAE

A0A6J1G7J6 enolase-phosphatase E1-like9.5e-48100Show/hide
Query:  MATAEVVTQEAALQEEVTEVEVPPLKVEEEAPAEEVAKEEAAEVAEPPVAVETKEVVAEEEEEEEAKEEVVEEKKEVEAAEVEAEEKEEAAAESEPAVAA
        MATAEVVTQEAALQEEVTEVEVPPLKVEEEAPAEEVAKEEAAEVAEPPVAVETKEVVAEEEEEEEAKEEVVEEKKEVEAAEVEAEEKEEAAAESEPAVAA
Subjt:  MATAEVVTQEAALQEEVTEVEVPPLKVEEEAPAEEVAKEEAAEVAEPPVAVETKEVVAEEEEEEEAKEEVVEEKKEVEAAEVEAEEKEEAAAESEPAVAA

Query:  EEEEEEAKPEAEPAAEEEAVEVKETAAEEAEEKPAEEEQAAEKAE
        EEEEEEAKPEAEPAAEEEAVEVKETAAEEAEEKPAEEEQAAEKAE
Subjt:  EEEEEEAKPEAEPAAEEEAVEVKETAAEEAEEKPAEEEQAAEKAE

A0A6J1I4V1 fibrous sheath CABYR-binding protein-like3.1e-3888.89Show/hide
Query:  MATAEVVTQEAALQEEVTEVEVPPLKVEEEA------PAEEVAKEEAAEVAEPPVAVETKEVVAEEEEEEEAKEEVVEEKKEVEAAEVEAEEKEEAAAES
        MATAEVVTQE ALQEEVTEVEVPPLKVEEEA      PAEEVAKEEAAEVAEPPV VETKEVVA +EEEEEAKEEVVEEKKEVEAAEVEAEEKEEA AES
Subjt:  MATAEVVTQEAALQEEVTEVEVPPLKVEEEA------PAEEVAKEEAAEVAEPPVAVETKEVVAEEEEEEEAKEEVVEEKKEVEAAEVEAEEKEEAAAES

Query:  EPAVA--AEEEEEEAKPEAEPAAEEEAVEVKETAAEEAEEKPAEEEQAAEKAE
        EPAVA   EEEEEEAKPEAEPAAEEEA EVKET AEEAEEKPAEEE AAEKAE
Subjt:  EPAVA--AEEEEEEAKPEAEPAAEEEAVEVKETAAEEAEEKPAEEEQAAEKAE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACTGCAGAGGTTGTAACACAGGAGGCAGCGCTCCAAGAAGAAGTAACAGAGGTGGAGGTACCACCGTTGAAGGTTGAAGAAGAGGCACCGGCGGAGGAGGTGGC
AAAAGAAGAAGCGGCTGAAGTGGCTGAACCCCCTGTTGCAGTTGAGACCAAGGAAGTAGTAGCAGAGGAGGAAGAAGAAGAAGAGGCAAAGGAGGAGGTTGTGGAAGAGA
AAAAAGAAGTAGAAGCAGCTGAAGTTGAGGCGGAAGAAAAAGAGGAAGCGGCAGCTGAGTCGGAGCCGGCGGTGGCGGCGGAGGAGGAGGAGGAGGAGGCCAAACCAGAG
GCTGAGCCAGCGGCGGAAGAAGAGGCCGTTGAGGTGAAAGAGACGGCTGCAGAAGAAGCAGAGGAGAAACCGGCTGAAGAAGAACAGGCAGCTGAGAAGGCCGAGTGA
mRNA sequenceShow/hide mRNA sequence
TCCCACCATTTCTTTCTCTTCTTCAATTTCTCTCTCTACTGCAATTTTACCATGGCCACTGCAGAGGTTGTAACACAGGAGGCAGCGCTCCAAGAAGAAGTAACAGAGGT
GGAGGTACCACCGTTGAAGGTTGAAGAAGAGGCACCGGCGGAGGAGGTGGCAAAAGAAGAAGCGGCTGAAGTGGCTGAACCCCCTGTTGCAGTTGAGACCAAGGAAGTAG
TAGCAGAGGAGGAAGAAGAAGAAGAGGCAAAGGAGGAGGTTGTGGAAGAGAAAAAAGAAGTAGAAGCAGCTGAAGTTGAGGCGGAAGAAAAAGAGGAAGCGGCAGCTGAG
TCGGAGCCGGCGGTGGCGGCGGAGGAGGAGGAGGAGGAGGCCAAACCAGAGGCTGAGCCAGCGGCGGAAGAAGAGGCCGTTGAGGTGAAAGAGACGGCTGCAGAAGAAGC
AGAGGAGAAACCGGCTGAAGAAGAACAGGCAGCTGAGAAGGCCGAGTGAAGTTGTGTAGAGTGTGTGTGTGTATGTCATGTTTAAGCGGTTGATTGAGTGGGGAAGGGAG
TGAATAAGGCAAGAGGGTTATAGGGATTAGGGGAACTTGTCTTTCTTTATGTGGATGTTTGTTTGGAATGCAATATTTTTGCTTCTCATAATGTGTTTTGTGTACTTCAT
ATAGCTTTGTGTAAGCTTTTAAGTGTCGGGTTAATATCGTGTTTGGCTTTACCGTTCTCGACGATTAAAAGAGCAAGCTCTTCTTTCAATATCTCGAACGTTAAGACTCT
GAAGTCTGTGAACACTCGTTTCAGAAATTAAAGTAGTATTTTACTTTGAAACAGAATTAGCGTTCTAGGCTCTTTACAGGGGAGGTGGGGT
Protein sequenceShow/hide protein sequence
MATAEVVTQEAALQEEVTEVEVPPLKVEEEAPAEEVAKEEAAEVAEPPVAVETKEVVAEEEEEEEAKEEVVEEKKEVEAAEVEAEEKEEAAAESEPAVAAEEEEEEAKPE
AEPAAEEEAVEVKETAAEEAEEKPAEEEQAAEKAE