; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh02G002250 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G002250
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionglucan endo-1,3-beta-glucosidase 1
Genome locationCmo_Chr02:1040235..1044091
RNA-Seq ExpressionCmoCh02G002250
SyntenyCmoCh02G002250
Gene Ontology termsGO:0009506 - plasmodesma (cellular component)
InterPro domainsIPR012946 - X8 domain
IPR044788 - Carbohydrate-binding X8 domain-containing protein, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140010.1 glucan endo-1,3-beta-glucosidase 12 isoform X1 [Cucumis sativus]1.9e-5091.92Show/hide
Query:  HLKEGGEFEQWCIADEQTPDDELQMALDWACGRGGGNCSKIQPNQPCFNPNTVKDHASFAFNAYFQNFKHQGGSCFFKGAAIITELDPSHGSCQYEFIP
        H   GGEFEQWC+ADEQTPDDELQMALDWACGRGG NCS IQPNQPCFNPNTVKDHASFAFN YFQ+FKHQGGSCFFKGAAIITELDPSHGSCQYEFIP
Subjt:  HLKEGGEFEQWCIADEQTPDDELQMALDWACGRGGGNCSKIQPNQPCFNPNTVKDHASFAFNAYFQNFKHQGGSCFFKGAAIITELDPSHGSCQYEFIP

XP_008464180.1 PREDICTED: glucan endo-1,3-beta-glucosidase 12 isoform X1 [Cucumis melo]2.1e-4989.9Show/hide
Query:  HLKEGGEFEQWCIADEQTPDDELQMALDWACGRGGGNCSKIQPNQPCFNPNTVKDHASFAFNAYFQNFKHQGGSCFFKGAAIITELDPSHGSCQYEFIP
        H   GGEFEQWC+ADEQ PDDELQMALDWACG+GG NCS IQPNQPCFNPNTVKDHASFAFN YFQ+FKHQGGSCFFKGAAIITELDPSHGSCQYEFIP
Subjt:  HLKEGGEFEQWCIADEQTPDDELQMALDWACGRGGGNCSKIQPNQPCFNPNTVKDHASFAFNAYFQNFKHQGGSCFFKGAAIITELDPSHGSCQYEFIP

XP_022947538.1 glucan endo-1,3-beta-glucosidase 12-like [Cucurbita moschata]6.8e-5398.97Show/hide
Query:  KEGGEFEQWCIADEQTPDDELQMALDWACGRGGGNCSKIQPNQPCFNPNTVKDHASFAFNAYFQNFKHQGGSCFFKGAAIITELDPSHGSCQYEFIP
        K GGEFEQWCIADEQTPDDELQMALDWACGRGGGNCSKIQPNQPCFNPNTVKDHASFAFNAYFQNFKHQGGSCFFKGAAIITELDPSHGSCQYEFIP
Subjt:  KEGGEFEQWCIADEQTPDDELQMALDWACGRGGGNCSKIQPNQPCFNPNTVKDHASFAFNAYFQNFKHQGGSCFFKGAAIITELDPSHGSCQYEFIP

XP_023532862.1 glucan endo-1,3-beta-glucosidase 12-like isoform X1 [Cucurbita pepo subsp. pepo]4.6e-5785.04Show/hide
Query:  MSNNQKRPKPHLKE------------------GGEFEQWCIADEQTPDDELQMALDWACGRGGGNCSKIQPNQPCFNPNTVKDHASFAFNAYFQNFKHQG
        MSNNQKR KPHLKE                  GGEFEQWCIADEQTPDDELQMALDWACGRGGGNCSKIQPNQPCFNPNTVKDHASFAFNAYFQNFKHQG
Subjt:  MSNNQKRPKPHLKE------------------GGEFEQWCIADEQTPDDELQMALDWACGRGGGNCSKIQPNQPCFNPNTVKDHASFAFNAYFQNFKHQG

Query:  GSCFFKGAAIITELDPSHGSCQYEFIP
        GSCFFKGAAIITELDPSHGSCQYEFIP
Subjt:  GSCFFKGAAIITELDPSHGSCQYEFIP

XP_031742600.1 glucan endo-1,3-beta-glucosidase 4 isoform X2 [Cucumis sativus]1.1e-5092Show/hide
Query:  PHLKEGGEFEQWCIADEQTPDDELQMALDWACGRGGGNCSKIQPNQPCFNPNTVKDHASFAFNAYFQNFKHQGGSCFFKGAAIITELDPSHGSCQYEFIP
        P   EGGEFEQWC+ADEQTPDDELQMALDWACGRGG NCS IQPNQPCFNPNTVKDHASFAFN YFQ+FKHQGGSCFFKGAAIITELDPSHGSCQYEFIP
Subjt:  PHLKEGGEFEQWCIADEQTPDDELQMALDWACGRGGGNCSKIQPNQPCFNPNTVKDHASFAFNAYFQNFKHQGGSCFFKGAAIITELDPSHGSCQYEFIP

TrEMBL top hitse value%identityAlignment
A0A0A0KDX6 X8 domain-containing protein9.0e-5191.92Show/hide
Query:  HLKEGGEFEQWCIADEQTPDDELQMALDWACGRGGGNCSKIQPNQPCFNPNTVKDHASFAFNAYFQNFKHQGGSCFFKGAAIITELDPSHGSCQYEFIP
        H   GGEFEQWC+ADEQTPDDELQMALDWACGRGG NCS IQPNQPCFNPNTVKDHASFAFN YFQ+FKHQGGSCFFKGAAIITELDPSHGSCQYEFIP
Subjt:  HLKEGGEFEQWCIADEQTPDDELQMALDWACGRGGGNCSKIQPNQPCFNPNTVKDHASFAFNAYFQNFKHQGGSCFFKGAAIITELDPSHGSCQYEFIP

A0A1S3CKW2 glucan endo-1,3-beta-glucosidase 12 isoform X22.9e-4989Show/hide
Query:  PHLKEGGEFEQWCIADEQTPDDELQMALDWACGRGGGNCSKIQPNQPCFNPNTVKDHASFAFNAYFQNFKHQGGSCFFKGAAIITELDPSHGSCQYEFIP
        P +  GGEFEQWC+ADEQ PDDELQMALDWACG+GG NCS IQPNQPCFNPNTVKDHASFAFN YFQ+FKHQGGSCFFKGAAIITELDPSHGSCQYEFIP
Subjt:  PHLKEGGEFEQWCIADEQTPDDELQMALDWACGRGGGNCSKIQPNQPCFNPNTVKDHASFAFNAYFQNFKHQGGSCFFKGAAIITELDPSHGSCQYEFIP

A0A1S3CKX6 glucan endo-1,3-beta-glucosidase 12 isoform X19.9e-5089.9Show/hide
Query:  HLKEGGEFEQWCIADEQTPDDELQMALDWACGRGGGNCSKIQPNQPCFNPNTVKDHASFAFNAYFQNFKHQGGSCFFKGAAIITELDPSHGSCQYEFIP
        H   GGEFEQWC+ADEQ PDDELQMALDWACG+GG NCS IQPNQPCFNPNTVKDHASFAFN YFQ+FKHQGGSCFFKGAAIITELDPSHGSCQYEFIP
Subjt:  HLKEGGEFEQWCIADEQTPDDELQMALDWACGRGGGNCSKIQPNQPCFNPNTVKDHASFAFNAYFQNFKHQGGSCFFKGAAIITELDPSHGSCQYEFIP

A0A6J1G6V9 glucan endo-1,3-beta-glucosidase 12-like3.3e-5398.97Show/hide
Query:  KEGGEFEQWCIADEQTPDDELQMALDWACGRGGGNCSKIQPNQPCFNPNTVKDHASFAFNAYFQNFKHQGGSCFFKGAAIITELDPSHGSCQYEFIP
        K GGEFEQWCIADEQTPDDELQMALDWACGRGGGNCSKIQPNQPCFNPNTVKDHASFAFNAYFQNFKHQGGSCFFKGAAIITELDPSHGSCQYEFIP
Subjt:  KEGGEFEQWCIADEQTPDDELQMALDWACGRGGGNCSKIQPNQPCFNPNTVKDHASFAFNAYFQNFKHQGGSCFFKGAAIITELDPSHGSCQYEFIP

A0A6J1I7Q3 glucan endo-1,3-beta-glucosidase 123.3e-5398.97Show/hide
Query:  KEGGEFEQWCIADEQTPDDELQMALDWACGRGGGNCSKIQPNQPCFNPNTVKDHASFAFNAYFQNFKHQGGSCFFKGAAIITELDPSHGSCQYEFIP
        K GGEFEQWCIADEQTPDDELQMALDWACGRGGGNCSKIQPNQPCFNPNTVKDHASFAFNAYFQNFKHQGGSCFFKGAAIITELDPSHGSCQYEFIP
Subjt:  KEGGEFEQWCIADEQTPDDELQMALDWACGRGGGNCSKIQPNQPCFNPNTVKDHASFAFNAYFQNFKHQGGSCFFKGAAIITELDPSHGSCQYEFIP

SwissProt top hitse value%identityAlignment
O65399 Glucan endo-1,3-beta-glucosidase 19.0e-2457.65Show/hide
Query:  EQWCIADEQTPDDELQMALDWACGRGGGNCSKIQPNQPCFNPNTVKDHASFAFNAYFQNFKHQGGSCFFKGAAIITELDPSHGSC
        + +CIA +      LQ ALDWACG G  NCS+IQP + C+ PN VK HASFAFN+Y+Q      GSC FKG A+IT  DPSHGSC
Subjt:  EQWCIADEQTPDDELQMALDWACGRGGGNCSKIQPNQPCFNPNTVKDHASFAFNAYFQNFKHQGGSCFFKGAAIITELDPSHGSC

Q8VYE5 Glucan endo-1,3-beta-glucosidase 124.1e-2450.53Show/hide
Query:  GGEFEQWCIADEQTPDDELQMALDWACGRGGGNCSKIQPNQPCFNPNTVKDHASFAFNAYFQNFKHQGGSCFFKGAAIITELDPSHGSCQYEFIP
        GG  ++WCIA  Q    ELQ ALDWACG G  +CS +QP+QPCF P+TV  HAS+AFN Y+Q        C F GA++  + DPS+G+C Y   P
Subjt:  GGEFEQWCIADEQTPDDELQMALDWACGRGGGNCSKIQPNQPCFNPNTVKDHASFAFNAYFQNFKHQGGSCFFKGAAIITELDPSHGSCQYEFIP

Q94CD8 Glucan endo-1,3-beta-glucosidase 45.9e-2354.12Show/hide
Query:  WCIADEQTPDDELQMALDWACGRGGGNCSKIQPNQPCFNPNTVKDHASFAFNAYFQNFKHQGGSCFFKGAAIITELDPSHGSCQY
        +C+A     DD+L   L+WACG+G  NC+ IQP QPC+ PN VK HASFAFN Y+Q  K  GG+C F G AI T  DPS+ +C Y
Subjt:  WCIADEQTPDDELQMALDWACGRGGGNCSKIQPNQPCFNPNTVKDHASFAFNAYFQNFKHQGGSCFFKGAAIITELDPSHGSCQY

Q9FJU9 Glucan endo-1,3-beta-glucosidase 132.7e-2046.67Show/hide
Query:  GEFEQWCIADEQTPDDELQMALDWACGRGGGNCSKIQPNQPCFNPNTVKDHASFAFNAYFQNFKHQGGSCFFKGAAIITELDPSHGSCQY
        G    WCIA  +  + +L+ ALDWACG G  +C+ IQP+QPCF P+T+  HASF FN+YFQ  +    +C F GA +    DPS+  C Y
Subjt:  GEFEQWCIADEQTPDDELQMALDWACGRGGGNCSKIQPNQPCFNPNTVKDHASFAFNAYFQNFKHQGGSCFFKGAAIITELDPSHGSCQY

Q9ZU91 Glucan endo-1,3-beta-glucosidase 35.7e-1844.83Show/hide
Query:  EQWCIADEQTPDDELQMALDWACGRGGGNCSKIQPNQPCFNPNTVKDHASFAFNAYFQNFKHQGGSCFFKGAAIITELDPSHGSCQY
        + +CIA E+     LQ ALDWACG G  +CS +   + C+ P+ V  H+++AFNAY+Q      GSC FKG A +T  DPS G+C +
Subjt:  EQWCIADEQTPDDELQMALDWACGRGGGNCSKIQPNQPCFNPNTVKDHASFAFNAYFQNFKHQGGSCFFKGAAIITELDPSHGSCQY

Arabidopsis top hitse value%identityAlignment
AT1G11820.2 O-Glycosyl hydrolases family 17 protein6.4e-2557.65Show/hide
Query:  EQWCIADEQTPDDELQMALDWACGRGGGNCSKIQPNQPCFNPNTVKDHASFAFNAYFQNFKHQGGSCFFKGAAIITELDPSHGSC
        + +CIA +      LQ ALDWACG G  NCS+IQP + C+ PN VK HASFAFN+Y+Q      GSC FKG A+IT  DPSHGSC
Subjt:  EQWCIADEQTPDDELQMALDWACGRGGGNCSKIQPNQPCFNPNTVKDHASFAFNAYFQNFKHQGGSCFFKGAAIITELDPSHGSC

AT2G04910.1 Carbohydrate-binding X8 domain superfamily protein3.3e-2963.86Show/hide
Query:  EFEQWCIADEQTPDDELQMALDWACGRGGGNCSKIQPNQPCFNPNTVKDHASFAFNAYFQNFKHQGGSCFFKGAAIITELDPS
        EF QWC+AD Q PD+ +Q A+DWAC  GG +CS IQPNQPCF PNTVKDHAS  FN Y+Q +K  GGSC F   A IT+ DPS
Subjt:  EFEQWCIADEQTPDDELQMALDWACGRGGGNCSKIQPNQPCFNPNTVKDHASFAFNAYFQNFKHQGGSCFFKGAAIITELDPS

AT2G04910.2 Carbohydrate-binding X8 domain superfamily protein4.4e-3462.37Show/hide
Query:  EFEQWCIADEQTPDDELQMALDWACGRGGGNCSKIQPNQPCFNPNTVKDHASFAFNAYFQNFKHQGGSCFFKGAAIITELDPSHGSCQYEFIP
        EF QWC+AD Q PD+ +Q A+DWAC  GG +CS IQPNQPCF PNTVKDHAS  FN Y+Q +K  GGSC F   A IT+ DPSH SC +E++P
Subjt:  EFEQWCIADEQTPDDELQMALDWACGRGGGNCSKIQPNQPCFNPNTVKDHASFAFNAYFQNFKHQGGSCFFKGAAIITELDPSHGSCQYEFIP

AT4G29360.1 O-Glycosyl hydrolases family 17 protein2.9e-2550.53Show/hide
Query:  GGEFEQWCIADEQTPDDELQMALDWACGRGGGNCSKIQPNQPCFNPNTVKDHASFAFNAYFQNFKHQGGSCFFKGAAIITELDPSHGSCQYEFIP
        GG  ++WCIA  Q    ELQ ALDWACG G  +CS +QP+QPCF P+TV  HAS+AFN Y+Q        C F GA++  + DPS+G+C Y   P
Subjt:  GGEFEQWCIADEQTPDDELQMALDWACGRGGGNCSKIQPNQPCFNPNTVKDHASFAFNAYFQNFKHQGGSCFFKGAAIITELDPSHGSCQYEFIP

AT5G35740.1 Carbohydrate-binding X8 domain superfamily protein6.8e-4377.66Show/hide
Query:  EFEQWCIADEQTPDDELQMALDWACGRGGGNCSKI-QPNQPCFNPNTVKDHASFAFNAYFQNFKHQGGSCFFKGAAIITELDPSHGSCQYEFIP
        E EQWCIADEQTPDDELQ ALDWACG+GG +CSK+ Q NQPCF PNT++DHASFAFN+Y+Q +K++GGSC+FKGAA+ITELDPSHGSCQYE+ P
Subjt:  EFEQWCIADEQTPDDELQMALDWACGRGGGNCSKI-QPNQPCFNPNTVKDHASFAFNAYFQNFKHQGGSCFFKGAAIITELDPSHGSCQYEFIP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAATAATCAGAAACGCCCGAAACCCCATTTGAAGGAAGGTGGGGAGTTTGAGCAATGGTGTATAGCAGACGAGCAGACCCCAGATGATGAACTACAAATGGCTTT
GGATTGGGCTTGTGGAAGAGGAGGCGGCAACTGCAGCAAAATCCAACCAAACCAGCCTTGTTTTAACCCAAATACAGTGAAAGATCATGCTTCATTTGCCTTCAATGCTT
ACTTTCAGAACTTCAAGCATCAGGGTGGATCCTGTTTCTTCAAAGGAGCTGCCATCATTACAGAGCTGGATCCTAGCCATGGTTCTTGCCAATACGAGTTTATTCCATAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGAATAATCAGAAACGCCCGAAACCCCATTTGAAGGAAGGTGGGGAGTTTGAGCAATGGTGTATAGCAGACGAGCAGACCCCAGATGATGAACTACAAATGGCTTT
GGATTGGGCTTGTGGAAGAGGAGGCGGCAACTGCAGCAAAATCCAACCAAACCAGCCTTGTTTTAACCCAAATACAGTGAAAGATCATGCTTCATTTGCCTTCAATGCTT
ACTTTCAGAACTTCAAGCATCAGGGTGGATCCTGTTTCTTCAAAGGAGCTGCCATCATTACAGAGCTGGATCCTAGCCATGGTTCTTGCCAATACGAGTTTATTCCATAG
TGAGAAGGCGAATTAGAAGAGATCACTGTTTCTGTTACTTGGTTGTTTCTGATATCCATGTAAACTGGCAAGACGGTCTCAATCGCTTTTAGAGCTTCG
Protein sequenceShow/hide protein sequence
MSNNQKRPKPHLKEGGEFEQWCIADEQTPDDELQMALDWACGRGGGNCSKIQPNQPCFNPNTVKDHASFAFNAYFQNFKHQGGSCFFKGAAIITELDPSHGSCQYEFIP