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CmoCh02G002400 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G002400
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRPM1-interacting protein 4
Genome locationCmo_Chr02:1129964..1132606
RNA-Seq ExpressionCmoCh02G002400
SyntenyCmoCh02G002400
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
InterPro domainsIPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site
IPR040387 - RPM1-interacting protein 4/NOI4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022140725.1 RPM1-interacting protein 4 [Momordica charantia]8.0e-2598.28Show/hide
Query:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGA
        MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDP+YKHGA
Subjt:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGA
XP_022943908.1 RPM1-interacting protein 4-like [Cucurbita moschata]7.5e-2391.38Show/hide
Query:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGA
        MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKK GG+PDSPAKDDP+YK+G+
Subjt:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGA
XP_022947539.1 uncharacterized protein LOC111451376 isoform X1 [Cucurbita moschata]3.6e-25100Show/hide
Query:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGA
        MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGA
Subjt:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGA
XP_022947540.1 uncharacterized protein LOC111451376 isoform X2 [Cucurbita moschata]1.4e-2498.28Show/hide
Query:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGA
        M EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGA
Subjt:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGA
XP_038902743.1 protein NOI4 [Benincasa hispida]2.0e-2393.1Show/hide
Query:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGA
        MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGG+PDSPAKDDP+YK+G+
Subjt:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGA
TrEMBL top hitse value%identityAlignment
A0A6J1CFY0 RPM1-interacting protein 43.9e-2598.28Show/hide
Query:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGA
        MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDP+YKHGA
Subjt:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGA
A0A6J1G736 uncharacterized protein LOC111451376 isoform X11.7e-25100Show/hide
Query:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGA
        MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGA
Subjt:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGA
A0A6J1G769 uncharacterized protein LOC111451376 isoform X26.6e-2598.28Show/hide
Query:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGA
        M EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGA
Subjt:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGA
A0A6J1I4X6 uncharacterized protein LOC111469905 isoform X26.6e-2598.28Show/hide
Query:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGA
        M EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGA
Subjt:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGA
A0A6J1I7R1 uncharacterized protein LOC111469905 isoform X11.7e-25100Show/hide
Query:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGA
        MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGA
Subjt:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGA
SwissProt top hitse value%identityAlignment
O22633 Protein NOI47.1e-1666.13Show/hide
Query:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGANHKP
        M++KG   PLPKFGEWDVNDPASAEGFTVIFNKAR+EKKTGG P SP K    +       P
Subjt:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGANHKP
Q8GYN5 RPM1-interacting protein 41.1e-0559.38Show/hide
Query:  LPKFGEWDVNDPASAEGFTVIFNKARNEKKTG
        +PKFG+WD N+P+SA+G+T IFNK R E+ +G
Subjt:  LPKFGEWDVNDPASAEGFTVIFNKARNEKKTG
Arabidopsis top hitse value%identityAlignment
AT2G04410.1 RPM1-interacting protein 4 (RIN4) family protein4.1e-1979.63Show/hide
Query:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSY
        MA+KG   PLPKFGEWDVNDP+SAEGFTVIFNKARNEKK GG  DSP KD+P Y
Subjt:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSY
AT4G35655.1 RPM1-interacting protein 4 (RIN4) family protein3.7e-1273.17Show/hide
Query:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTG
        MA    + PLPKFGEWDVNDPA+AEGFTVIF+KA  +KKTG
Subjt:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTG
AT5G55850.1 RPM1-interacting protein 4 (RIN4) family protein5.0e-1766.13Show/hide
Query:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGANHKP
        M++KG   PLPKFGEWDVNDPASAEGFTVIFNKAR+EKKTGG P SP K    +       P
Subjt:  MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGANHKP
AT5G55850.2 RPM1-interacting protein 4 (RIN4) family protein1.9e-1670.37Show/hide
Query:  PLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGANHKP
        PLPKFGEWDVNDPASAEGFTVIFNKAR+EKKTGG P SP K    +       P
Subjt:  PLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGANHKP
AT5G55850.3 RPM1-interacting protein 4 (RIN4) family protein1.9e-1670.37Show/hide
Query:  PLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGANHKP
        PLPKFGEWDVNDPASAEGFTVIFNKAR+EKKTGG P SP K    +       P
Subjt:  PLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGANHKP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAAAAAGGCAGTAGCAGTCCCTTACCAAAGTTCGGCGAATGGGATGTCAACGATCCCGCATCCGCCGAGGGATTCACAGTCATCTTCAATAAAGCCAGGAACGA
GAAAAAGACTGGTGGCTTGCCTGACTCTCCTGCAAAGGATGACCCTTCATATAAGCATGGCGCAAATCATAAGCCTTACGGGCGCTTGATAGCGGGGTTCAGCAGAAATG
TTCATGTTTTCTTGAAAAACTCTTCATCCACAAACTAA
mRNA sequenceShow/hide mRNA sequence
CTCCACTTCTATATCATCCCATTAGCCAATTCCTTGTTGGTCCCAGTCTTAGCCCTTCTTCTTCCCCTCTCTCTCTCTCTCTCCTCTTCTCTCTCCTCTCCTCTGAATCA
ATCATAGACCCCTTTCTCAAGGCGGCTTTATCCTTCAACATCTTCTTCTTCTCAGAGCTCAGTCATGGCGGAAAAAGGCAGTAGCAGTCCCTTACCAAAGTTCGGCGAAT
GGGATGTCAACGATCCCGCATCCGCCGAGGGATTCACAGTCATCTTCAATAAAGCCAGGAACGAGAAAAAGACTGGTGGCTTGCCTGACTCTCCTGCAAAGGATGACCCT
TCATATAAGCATGGCGCAAATCATAAGCCTTACGGGCGCTTGATAGCGGGGTTCAGCAGAAATGTTCATGTTTTCTTGAAAAACTCTTCATCCACAAACTAA
Protein sequenceShow/hide protein sequence
MAEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPSYKHGANHKPYGRLIAGFSRNVHVFLKNSSSTN