; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh02G002500 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G002500
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationCmo_Chr02:1178707..1179713
RNA-Seq ExpressionCmoCh02G002500
SyntenyCmoCh02G002500
Gene Ontology termsGO:0006402 - mRNA catabolic process (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0030014 - CCR4-NOT complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604931.1 putative CCR4-associated factor 1-like 8, partial [Cucurbita argyrosperma subsp. sororia]4.4e-14997.4Show/hide
Query:  MGRRNRERPRRRTPSIQEVWASNFDHEILRLERCLQANHILSIDTEFPGCIRSTPWGSIDERVYEDLRFNVNQTKLIQLGLTASDESGQVAGSWEFNFSD
        MGRRNR RPRRRTPSIQEVWASNFDHEILRLERCLQANHILSIDTEFPGCIRSTPWGSIDERVYEDLRFNVNQTKLIQLGLTASDESGQV GSWEFNFSD
Subjt:  MGRRNRERPRRRTPSIQEVWASNFDHEILRLERCLQANHILSIDTEFPGCIRSTPWGSIDERVYEDLRFNVNQTKLIQLGLTASDESGQVAGSWEFNFSD

Query:  FDHQIDTQNPSSIAFLEQNGLDFAKLKKQGIPLSLFTLNFSRIIRRSRVRKWVTFHGLYDIGYLVKAMGVAEELPESMEEFAEMVARGVGVVRDLKEVAR
        FDHQIDTQNPSSI+FLEQNGLDFAKLKKQGIPLSLFTLNFSRIIRRSRVRKWVTFHGLYDIGYLVKAMGVAEELPESMEEFAEMVARGVGVVRDLKEVAR
Subjt:  FDHQIDTQNPSSIAFLEQNGLDFAKLKKQGIPLSLFTLNFSRIIRRSRVRKWVTFHGLYDIGYLVKAMGVAEELPESMEEFAEMVARGVGVVRDLKEVAR

Query:  WCEGLEQGRVGLERLGELLGEKRFGMKHHAGSDSLLTAFVHAKMARWFRLESEAYDGHLYGLRNKLQYM
        WCEGLEQGRVGLERLGELLGEKRFGMKHHAGSDSLLTAFVHAKMARWFRLES AYDGHLYGL+NKL++M
Subjt:  WCEGLEQGRVGLERLGELLGEKRFGMKHHAGSDSLLTAFVHAKMARWFRLESEAYDGHLYGLRNKLQYM

XP_022146113.1 putative CCR4-associated factor 1 homolog 8 [Momordica charantia]2.2e-9263.91Show/hide
Query:  MGRRNRERPRRRTPSIQEVWASNFDHEILRLERCLQANHILSIDTEFPGCIRSTPWGSIDERVYEDLRFNVNQTKLIQLGLTASDESGQVAGSWEFNFSD
        MGR  R   RR    I+EVW+ NFD E+  L  CL    IL+IDTEFPG IRSTPWG+I+E++Y+D RFNVN+TKLIQLGLTASDE G +  +WEFNFSD
Subjt:  MGRRNRERPRRRTPSIQEVWASNFDHEILRLERCLQANHILSIDTEFPGCIRSTPWGSIDERVYEDLRFNVNQTKLIQLGLTASDESGQVAGSWEFNFSD

Query:  FDHQIDTQNPSSIAFLEQNGLDFAKLKKQGIPLSLFTLNFSRIIRRSRVRKWVTFHGLYDIGYLVKAMGVAEELPESMEEFAEMVARGVGVVRDLKEVAR
        FD QIDT N SS++FL+QNGLDF KLK+ GIP++ FT     + R+ R+ +WVTFHGLYDIGYL+KAMGVA E+PESMEEFAE+V R +G V DLK +A+
Subjt:  FDHQIDTQNPSSIAFLEQNGLDFAKLKKQGIPLSLFTLNFSRIIRRSRVRKWVTFHGLYDIGYLVKAMGVAEELPESMEEFAEMVARGVGVVRDLKEVAR

Query:  WCEGLEQGRVGLERLGELLGEKRFGMKHHAGSDSLLTAFVHAKMARWFRLESEAYDGHLYGLRNKL
        +CEGLE G++GLE+L +L+ +KRFG KHHAGSDSLLTA ++AKM   F L SE  DG LYGLR KL
Subjt:  WCEGLEQGRVGLERLGELLGEKRFGMKHHAGSDSLLTAFVHAKMARWFRLESEAYDGHLYGLRNKL

XP_022947867.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata]5.9e-154100Show/hide
Query:  MGRRNRERPRRRTPSIQEVWASNFDHEILRLERCLQANHILSIDTEFPGCIRSTPWGSIDERVYEDLRFNVNQTKLIQLGLTASDESGQVAGSWEFNFSD
        MGRRNRERPRRRTPSIQEVWASNFDHEILRLERCLQANHILSIDTEFPGCIRSTPWGSIDERVYEDLRFNVNQTKLIQLGLTASDESGQVAGSWEFNFSD
Subjt:  MGRRNRERPRRRTPSIQEVWASNFDHEILRLERCLQANHILSIDTEFPGCIRSTPWGSIDERVYEDLRFNVNQTKLIQLGLTASDESGQVAGSWEFNFSD

Query:  FDHQIDTQNPSSIAFLEQNGLDFAKLKKQGIPLSLFTLNFSRIIRRSRVRKWVTFHGLYDIGYLVKAMGVAEELPESMEEFAEMVARGVGVVRDLKEVAR
        FDHQIDTQNPSSIAFLEQNGLDFAKLKKQGIPLSLFTLNFSRIIRRSRVRKWVTFHGLYDIGYLVKAMGVAEELPESMEEFAEMVARGVGVVRDLKEVAR
Subjt:  FDHQIDTQNPSSIAFLEQNGLDFAKLKKQGIPLSLFTLNFSRIIRRSRVRKWVTFHGLYDIGYLVKAMGVAEELPESMEEFAEMVARGVGVVRDLKEVAR

Query:  WCEGLEQGRVGLERLGELLGEKRFGMKHHAGSDSLLTAFVHAKMARWFRLESEAYDGHLYGLRNKLQYMNE
        WCEGLEQGRVGLERLGELLGEKRFGMKHHAGSDSLLTAFVHAKMARWFRLESEAYDGHLYGLRNKLQYMNE
Subjt:  WCEGLEQGRVGLERLGELLGEKRFGMKHHAGSDSLLTAFVHAKMARWFRLESEAYDGHLYGLRNKLQYMNE

XP_023533171.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita pepo subsp. pepo]1.6e-13894.3Show/hide
Query:  MGRRNRERPRRRTPSIQEVWASNFDHEILRLERCLQANHILSIDTEFPGCIRSTPWGSIDERVYEDLRFNVNQTKLIQLGLTASDESGQVAGSWEFNFSD
        MGRRNR RPRRRTPSIQEVWASNFDHEILRLERCLQANHILSIDTEFPGCIRSTPWGSIDERVYEDLRFNVNQTKLIQLGLTASDESGQVAGSWEFNFSD
Subjt:  MGRRNRERPRRRTPSIQEVWASNFDHEILRLERCLQANHILSIDTEFPGCIRSTPWGSIDERVYEDLRFNVNQTKLIQLGLTASDESGQVAGSWEFNFSD

Query:  FDHQIDTQNPSSIAFLEQNGLDFAKLKKQGIPLSLFTLNFSRIIRRSRVRKWVTFHGLYDIGYLVKAMGVAEELPESMEEFAEMVARGVGVVRDLKEVAR
        FDHQIDTQNPSSI+FLEQNGLDFAKLKKQGIPLSLFTL FSRIIRRSRVRKWVTFHGLYDIGYLVKAMGVAEELPESMEEFAEMVARGVGVVRDLKEVAR
Subjt:  FDHQIDTQNPSSIAFLEQNGLDFAKLKKQGIPLSLFTLNFSRIIRRSRVRKWVTFHGLYDIGYLVKAMGVAEELPESMEEFAEMVARGVGVVRDLKEVAR

Query:  WCEGLEQGRVGLERLGELLGEKRFGMKHHAGSDSLLTAFVHAKMARWFRLESEAYDGHLYGLR
        WCEGLEQG+VGLERLGELLGEKRFGMKHHAGSDSLLTAFVHAKMARW  LES        G R
Subjt:  WCEGLEQGRVGLERLGELLGEKRFGMKHHAGSDSLLTAFVHAKMARWFRLESEAYDGHLYGLR

XP_038895744.1 putative CCR4-associated factor 1 homolog 8 [Benincasa hispida]2.7e-9867.05Show/hide
Query:  RRRTPSIQEVWASNFDHEILRLERCLQANHILSIDTEFPGCIRSTPWGSIDERVYEDLRFNVNQTKLIQLGLTASDESGQVAGSWEFNFSDFDHQIDTQN
        R R   I +VWASNFD EI +LE CL+ + I+SIDTEFPG IR++PWGSIDE +YED RFNVNQTKLIQLGLTA D+SG++ GSWEFNFSDFD +ID Q+
Subjt:  RRRTPSIQEVWASNFDHEILRLERCLQANHILSIDTEFPGCIRSTPWGSIDERVYEDLRFNVNQTKLIQLGLTASDESGQVAGSWEFNFSDFDHQIDTQN

Query:  PSSIAFLEQNGLDFAKLKKQGIPLSLFTLNFSRIIRRSRVRKWVTFHGLYDIGYLVKAMGVAEELPESMEEFAEMVARGVGVVRDLKEVARWCEGLEQGR
        PSS +FLEQNGLDF KLKK GIP++LFT  F  IIR+  V +WVTFHGLYDIGYL+KAMG+ E LPE+MEEFA +V R +G+VRDLK +AR+CEGLE G+
Subjt:  PSSIAFLEQNGLDFAKLKKQGIPLSLFTLNFSRIIRRSRVRKWVTFHGLYDIGYLVKAMGVAEELPESMEEFAEMVARGVGVVRDLKEVARWCEGLEQGR

Query:  VGLERLGELLGEKRFGMKHHAGSDSLLTAFVHAKMARWFRLESEAYDGHLYGLRNKLQYMN
        +GLERLG+LL +KR+G+KH+AGSDSLLTA  H +M + F +++E  DG+LYG  NKLQ M+
Subjt:  VGLERLGELLGEKRFGMKHHAGSDSLLTAFVHAKMARWFRLESEAYDGHLYGLRNKLQYMN

TrEMBL top hitse value%identityAlignment
A0A6J1CXP9 Poly(A)-specific ribonuclease1.1e-9263.91Show/hide
Query:  MGRRNRERPRRRTPSIQEVWASNFDHEILRLERCLQANHILSIDTEFPGCIRSTPWGSIDERVYEDLRFNVNQTKLIQLGLTASDESGQVAGSWEFNFSD
        MGR  R   RR    I+EVW+ NFD E+  L  CL    IL+IDTEFPG IRSTPWG+I+E++Y+D RFNVN+TKLIQLGLTASDE G +  +WEFNFSD
Subjt:  MGRRNRERPRRRTPSIQEVWASNFDHEILRLERCLQANHILSIDTEFPGCIRSTPWGSIDERVYEDLRFNVNQTKLIQLGLTASDESGQVAGSWEFNFSD

Query:  FDHQIDTQNPSSIAFLEQNGLDFAKLKKQGIPLSLFTLNFSRIIRRSRVRKWVTFHGLYDIGYLVKAMGVAEELPESMEEFAEMVARGVGVVRDLKEVAR
        FD QIDT N SS++FL+QNGLDF KLK+ GIP++ FT     + R+ R+ +WVTFHGLYDIGYL+KAMGVA E+PESMEEFAE+V R +G V DLK +A+
Subjt:  FDHQIDTQNPSSIAFLEQNGLDFAKLKKQGIPLSLFTLNFSRIIRRSRVRKWVTFHGLYDIGYLVKAMGVAEELPESMEEFAEMVARGVGVVRDLKEVAR

Query:  WCEGLEQGRVGLERLGELLGEKRFGMKHHAGSDSLLTAFVHAKMARWFRLESEAYDGHLYGLRNKL
        +CEGLE G++GLE+L +L+ +KRFG KHHAGSDSLLTA ++AKM   F L SE  DG LYGLR KL
Subjt:  WCEGLEQGRVGLERLGELLGEKRFGMKHHAGSDSLLTAFVHAKMARWFRLESEAYDGHLYGLRNKL

A0A6J1G7L2 Poly(A)-specific ribonuclease2.9e-154100Show/hide
Query:  MGRRNRERPRRRTPSIQEVWASNFDHEILRLERCLQANHILSIDTEFPGCIRSTPWGSIDERVYEDLRFNVNQTKLIQLGLTASDESGQVAGSWEFNFSD
        MGRRNRERPRRRTPSIQEVWASNFDHEILRLERCLQANHILSIDTEFPGCIRSTPWGSIDERVYEDLRFNVNQTKLIQLGLTASDESGQVAGSWEFNFSD
Subjt:  MGRRNRERPRRRTPSIQEVWASNFDHEILRLERCLQANHILSIDTEFPGCIRSTPWGSIDERVYEDLRFNVNQTKLIQLGLTASDESGQVAGSWEFNFSD

Query:  FDHQIDTQNPSSIAFLEQNGLDFAKLKKQGIPLSLFTLNFSRIIRRSRVRKWVTFHGLYDIGYLVKAMGVAEELPESMEEFAEMVARGVGVVRDLKEVAR
        FDHQIDTQNPSSIAFLEQNGLDFAKLKKQGIPLSLFTLNFSRIIRRSRVRKWVTFHGLYDIGYLVKAMGVAEELPESMEEFAEMVARGVGVVRDLKEVAR
Subjt:  FDHQIDTQNPSSIAFLEQNGLDFAKLKKQGIPLSLFTLNFSRIIRRSRVRKWVTFHGLYDIGYLVKAMGVAEELPESMEEFAEMVARGVGVVRDLKEVAR

Query:  WCEGLEQGRVGLERLGELLGEKRFGMKHHAGSDSLLTAFVHAKMARWFRLESEAYDGHLYGLRNKLQYMNE
        WCEGLEQGRVGLERLGELLGEKRFGMKHHAGSDSLLTAFVHAKMARWFRLESEAYDGHLYGLRNKLQYMNE
Subjt:  WCEGLEQGRVGLERLGELLGEKRFGMKHHAGSDSLLTAFVHAKMARWFRLESEAYDGHLYGLRNKLQYMNE

A0A6J1G7T4 Poly(A)-specific ribonuclease1.2e-9161.78Show/hide
Query:  PRRRTPSIQEVWASNFDHEILRLERCLQANHILSIDTEFPGCIRSTPWGSIDERVYEDLRFNVNQTKLIQLGLTASDESGQVAGSWEFNFSDFDHQIDTQ
        PR   P I+EVWA N DHEI+RL+RCL +  I+SIDTEFPGCI+ TPWG+ DE +Y D RFNVNQTK+IQLG+T SDESG + G+WEFNFSDFD +ID  
Subjt:  PRRRTPSIQEVWASNFDHEILRLERCLQANHILSIDTEFPGCIRSTPWGSIDERVYEDLRFNVNQTKLIQLGLTASDESGQVAGSWEFNFSDFDHQIDTQ

Query:  NPSSIAFLEQNGLDFAKLKKQGIPLSLFTLNFSRIIRRSRVRKWVTFHGLYDIGYLVKAMGVAEELPESMEEFAEMVARGVGVVRDLKEVARWCEGLEQG
        NP+SI FL+QNGLDF KLKK GI +  F + F   + +  + +WVTFHGLYDIGYL+ AMGV + LPE++ EF  +VAR VG VRDLK +AR+CEGLE G
Subjt:  NPSSIAFLEQNGLDFAKLKKQGIPLSLFTLNFSRIIRRSRVRKWVTFHGLYDIGYLVKAMGVAEELPESMEEFAEMVARGVGVVRDLKEVARWCEGLEQG

Query:  RVGLERLGELLGEKRFGMKHHAGSDSLLTAFVHAKMARWFRLESEAYDGHLYGLRNKLQ
         +GLE+LG+LL +KRFG+KHHAGSDSL+TA +H KM + +   +E  DG LYGL  K +
Subjt:  RVGLERLGELLGEKRFGMKHHAGSDSLLTAFVHAKMARWFRLESEAYDGHLYGLRNKLQ

A0A6J1I4S7 Poly(A)-specific ribonuclease1.0e-9061Show/hide
Query:  PRRRTPSIQEVWASNFDHEILRLERCLQANHILSIDTEFPGCIRSTPWGSIDERVYEDLRFNVNQTKLIQLGLTASDESGQVAGSWEFNFSDFDHQIDTQ
        PR   P I EVWA N D EILRL+ CL    ++SIDTEFPGCI+ TPWG+IDE +Y D RFNVNQTK+IQLG+T SDESG + G+WEFNFSDFD +ID  
Subjt:  PRRRTPSIQEVWASNFDHEILRLERCLQANHILSIDTEFPGCIRSTPWGSIDERVYEDLRFNVNQTKLIQLGLTASDESGQVAGSWEFNFSDFDHQIDTQ

Query:  NPSSIAFLEQNGLDFAKLKKQGIPLSLFTLNFSRIIRRSRVRKWVTFHGLYDIGYLVKAMGVAEELPESMEEFAEMVARGVGVVRDLKEVARWCEGLEQG
        NP+SI FL+QNGLDF KLKK GI +  F + F   +R+  + +W+TFHGLYDIGYL+ A+GV + LPE++ EF  +VAR VG VRDLK +AR+CEGLE G
Subjt:  NPSSIAFLEQNGLDFAKLKKQGIPLSLFTLNFSRIIRRSRVRKWVTFHGLYDIGYLVKAMGVAEELPESMEEFAEMVARGVGVVRDLKEVARWCEGLEQG

Query:  RVGLERLGELLGEKRFGMKHHAGSDSLLTAFVHAKMARWFRLESEAYDGHLYGLRNKLQ
         +GLE+LG+LL +KRFG+KHHAGSDSL+TA +H KM + +   +E  DG LYGL  K +
Subjt:  RVGLERLGELLGEKRFGMKHHAGSDSLLTAFVHAKMARWFRLESEAYDGHLYGLRNKLQ

A0A6J1I6H7 Poly(A)-specific ribonuclease1.0e-9061Show/hide
Query:  PRRRTPSIQEVWASNFDHEILRLERCLQANHILSIDTEFPGCIRSTPWGSIDERVYEDLRFNVNQTKLIQLGLTASDESGQVAGSWEFNFSDFDHQIDTQ
        PR   P I EVWA N D EILRL+ CL    ++SIDTEFPGCI+ TPWG+IDE +Y D RFNVNQTK+IQLG+T SDESG + G+WEFNFSDFD +ID  
Subjt:  PRRRTPSIQEVWASNFDHEILRLERCLQANHILSIDTEFPGCIRSTPWGSIDERVYEDLRFNVNQTKLIQLGLTASDESGQVAGSWEFNFSDFDHQIDTQ

Query:  NPSSIAFLEQNGLDFAKLKKQGIPLSLFTLNFSRIIRRSRVRKWVTFHGLYDIGYLVKAMGVAEELPESMEEFAEMVARGVGVVRDLKEVARWCEGLEQG
        NP+SI FL+QNGLDF KLKK GI +  F + F   +R+  + +W+TFHGLYDIGYL+ A+GV + LPE++ EF  +VAR VG VRDLK +AR+CEGLE G
Subjt:  NPSSIAFLEQNGLDFAKLKKQGIPLSLFTLNFSRIIRRSRVRKWVTFHGLYDIGYLVKAMGVAEELPESMEEFAEMVARGVGVVRDLKEVARWCEGLEQG

Query:  RVGLERLGELLGEKRFGMKHHAGSDSLLTAFVHAKMARWFRLESEAYDGHLYGLRNKLQ
         +GLE+LG+LL +KRFG+KHHAGSDSL+TA +H KM + +   +E  DG LYGL  K +
Subjt:  RVGLERLGELLGEKRFGMKHHAGSDSLLTAFVHAKMARWFRLESEAYDGHLYGLRNKLQ

SwissProt top hitse value%identityAlignment
O64773 Probable CCR4-associated factor 1 homolog 52.8e-4543.23Show/hide
Query:  EVWASNFDHEILRLERCLQANHILSIDTEFPGCIRSTPWGSIDERVYEDLRFNVNQTKLIQLGLTASDESGQVAGSWEFNFSDFDHQIDTQNPSSIAFLE
        EVW  N   E+  +  CL+  + ++IDTEFPGC++ TP  + DE  Y D++FNV+ T LIQLGLT   +   +  +WE N SDF+     +N  SIAFL+
Subjt:  EVWASNFDHEILRLERCLQANHILSIDTEFPGCIRSTPWGSIDERVYEDLRFNVNQTKLIQLGLTASDESGQVAGSWEFNFSDFDHQIDTQNPSSIAFLE

Query:  QNGLDFAKLKKQGIPLSLFTLNFSRIIRRSRVR-KWVTFHGLYDIGYLVKAMGVAEELPESMEEFAEMVARGVG-VVRDLKEVARWCEGLEQGRVGLERL
         NGLD  K++++GI +  F + FS+I+     + +WVTF G YD  YL+K +   + LPE+ +EF E V + +G  V D+K++A  C GL   R GL+R+
Subjt:  QNGLDFAKLKKQGIPLSLFTLNFSRIIRRSRVR-KWVTFHGLYDIGYLVKAMGVAEELPESMEEFAEMVARGVG-VVRDLKEVARWCEGLEQGRVGLERL

Query:  GELLGEKRFGMKHHAGSDSLLTAFVHAKM
         ++L  +R G  HHAGSDS LTA V  K+
Subjt:  GELLGEKRFGMKHHAGSDSLLTAFVHAKM

Q9C6M9 Putative CCR4-associated factor 1 homolog 44.7e-4543.67Show/hide
Query:  EVWASNFDHEILRLERCLQANHILSIDTEFPGCIRSTPWGSIDERVYEDLRFNVNQTKLIQLGLTASDESGQVAGSWEFNFSDFDHQIDTQNPSSIAFLE
        EVW  N + E+  +  CL+    ++IDTEFPGC++ TP  + +E  Y D++FNV+ T LIQLG T  D  G +  +WE N SDF+     +N  SIAFL+
Subjt:  EVWASNFDHEILRLERCLQANHILSIDTEFPGCIRSTPWGSIDERVYEDLRFNVNQTKLIQLGLTASDESGQVAGSWEFNFSDFDHQIDTQNPSSIAFLE

Query:  QNGLDFAKLKKQGIPLSLFTLNFSRIIRRSRVR-KWVTFHGLYDIGYLVKAMGVAEELPESMEEFAEMVARGVG-VVRDLKEVARWCEGLEQGRVGLERL
         NGL+  K+ ++GI +  F  +FS+I++    +  WV F G YD  YLVK +   + LPE+ EEF E V + +G  V D+K++A  C GL   R GL+R+
Subjt:  QNGLDFAKLKKQGIPLSLFTLNFSRIIRRSRVR-KWVTFHGLYDIGYLVKAMGVAEELPESMEEFAEMVARGVG-VVRDLKEVARWCEGLEQGRVGLERL

Query:  GELLGEKRFGMKHHAGSDSLLTAFVHAKM
         ++L  KR G  HHAGSDS LTA V  K+
Subjt:  GELLGEKRFGMKHHAGSDSLLTAFVHAKM

Q9LXM4 Putative CCR4-associated factor 1 homolog 83.6e-4545.7Show/hide
Query:  LERCLQANHILSIDTEFPGCIRSTPWGSIDERVYEDLRFNVNQTKLIQLGLTASDESGQVAGSWEFNFSDFDHQIDTQNPSSIAFLEQNGLDFAKLKKQG
        +E CL++   ++IDTEFP  +R T   + DE  Y D+ F+V++ KLIQLGLT  D +G++ G+WE NFSDF    D +N  SI FL +NGLD  K++++G
Subjt:  LERCLQANHILSIDTEFPGCIRSTPWGSIDERVYEDLRFNVNQTKLIQLGLTASDESGQVAGSWEFNFSDFDHQIDTQNPSSIAFLEQNGLDFAKLKKQG

Query:  IPLSLFTLNFSRIIRRSRVR-KWVTFHGLYDIGYLVKAMGVAEELPESMEEFAEMVARGVGVVRDLKEVARWCEGLEQGRVGLERLGELLGEKRFGMKHH
        I +  F      +++++R    WVTFHG YDI YL+K     E LP + E F++ VAR +G V DLK +A  CEGL   R+GLE L    G  R G  HH
Subjt:  IPLSLFTLNFSRIIRRSRVR-KWVTFHGLYDIGYLVKAMGVAEELPESMEEFAEMVARGVGVVRDLKEVARWCEGLEQGRVGLERLGELLGEKRFGMKHH

Query:  AGSDSLLTAFVHAKMARWFRL
        AGS++ LTA V AK+   F L
Subjt:  AGSDSLLTAFVHAKMARWFRL

Q9SFX6 Putative CCR4-associated factor 1 homolog 32.1e-4544.1Show/hide
Query:  EVWASNFDHEILRLERCLQANHILSIDTEFPGCIRSTPWGSIDERVYEDLRFNVNQTKLIQLGLTASDESGQVAGSWEFNFSDFDHQIDTQNPSSIAFLE
        EVW  N + E+  +  CL+    ++IDTEFPGC++ TP  + +E  Y D++FNV+ T LIQLG T  D  G  A +WE N SDFD     +N  SIAFL+
Subjt:  EVWASNFDHEILRLERCLQANHILSIDTEFPGCIRSTPWGSIDERVYEDLRFNVNQTKLIQLGLTASDESGQVAGSWEFNFSDFDHQIDTQNPSSIAFLE

Query:  QNGLDFAKLKKQGIPLSLFTLNFSRIIRRSRVR-KWVTFHGLYDIGYLVKAMGVAEELPESMEEFAEMVARGVG-VVRDLKEVARWCEGLEQGRVGLERL
         NGL+  K++++GI +  F  +FS+I+     +  WV F G YD  YLVK +   + LPE+ EEF E V + +G  V D+K++A  C GL   + GL+R+
Subjt:  QNGLDFAKLKKQGIPLSLFTLNFSRIIRRSRVR-KWVTFHGLYDIGYLVKAMGVAEELPESMEEFAEMVARGVG-VVRDLKEVARWCEGLEQGRVGLERL

Query:  GELLGEKRFGMKHHAGSDSLLTAFVHAKM
         ++L  KR G  HHAGSDS LTA V  K+
Subjt:  GELLGEKRFGMKHHAGSDSLLTAFVHAKM

Q9SHJ0 Probable CCR4-associated factor 1 homolog 11.7e-4238.25Show/hide
Query:  PSIQEVWASNFDHEILRLERCLQANHILSIDTEFPGCIRSTPWGSIDERVYEDLRFNVNQTKLIQLGLTASDESGQVAGSWEFNFSDFDHQIDTQNPSSI
        P  + VW SN D E+ R+  CL+   +++ DTE+PG I  T + S  +  Y  ++ NV  TKLIQ G T  +  G++ G WE NFS+F    DT+N  SI
Subjt:  PSIQEVWASNFDHEILRLERCLQANHILSIDTEFPGCIRSTPWGSIDERVYEDLRFNVNQTKLIQLGLTASDESGQVAGSWEFNFSDFDHQIDTQNPSSI

Query:  AFLEQNGLDFAKLKKQGIPL--SLFTLNFSRIIRRSRVRKWVTFHGLYDIGYLVKAMGVAEELPESMEEFAEMVARGVGVVRDLKEVARWCEGLEQGRVG
         FL ++GLD  K++ +G+ +    F      + R  +  ++VTF G YD  Y +  +    +LPE+  EFA  V +  G V D K +A +CEGL +  +G
Subjt:  AFLEQNGLDFAKLKKQGIPL--SLFTLNFSRIIRRSRVRKWVTFHGLYDIGYLVKAMGVAEELPESMEEFAEMVARGVGVVRDLKEVARWCEGLEQGRVG

Query:  LERLGELLGEKRFGMKHHAGSDSLLTAFVHAKMARWFRLESEAYDGHLYGL
        L +L +LL   R G  HHAGSDSL+TA V  K+   +  +S    G +YG+
Subjt:  LERLGELLGEKRFGMKHHAGSDSLLTAFVHAKMARWFRLESEAYDGHLYGL

Arabidopsis top hitse value%identityAlignment
AT1G06450.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.2e-4338.25Show/hide
Query:  PSIQEVWASNFDHEILRLERCLQANHILSIDTEFPGCIRSTPWGSIDERVYEDLRFNVNQTKLIQLGLTASDESGQVAGSWEFNFSDFDHQIDTQNPSSI
        P  + VW SN D E+ R+  CL+   +++ DTE+PG I  T + S  +  Y  ++ NV  TKLIQ G T  +  G++ G WE NFS+F    DT+N  SI
Subjt:  PSIQEVWASNFDHEILRLERCLQANHILSIDTEFPGCIRSTPWGSIDERVYEDLRFNVNQTKLIQLGLTASDESGQVAGSWEFNFSDFDHQIDTQNPSSI

Query:  AFLEQNGLDFAKLKKQGIPL--SLFTLNFSRIIRRSRVRKWVTFHGLYDIGYLVKAMGVAEELPESMEEFAEMVARGVGVVRDLKEVARWCEGLEQGRVG
         FL ++GLD  K++ +G+ +    F      + R  +  ++VTF G YD  Y +  +    +LPE+  EFA  V +  G V D K +A +CEGL +  +G
Subjt:  AFLEQNGLDFAKLKKQGIPL--SLFTLNFSRIIRRSRVRKWVTFHGLYDIGYLVKAMGVAEELPESMEEFAEMVARGVGVVRDLKEVARWCEGLEQGRVG

Query:  LERLGELLGEKRFGMKHHAGSDSLLTAFVHAKMARWFRLESEAYDGHLYGL
        L +L +LL   R G  HHAGSDSL+TA V  K+   +  +S    G +YG+
Subjt:  LERLGELLGEKRFGMKHHAGSDSLLTAFVHAKMARWFRLESEAYDGHLYGL

AT1G27820.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.5e-4644.1Show/hide
Query:  EVWASNFDHEILRLERCLQANHILSIDTEFPGCIRSTPWGSIDERVYEDLRFNVNQTKLIQLGLTASDESGQVAGSWEFNFSDFDHQIDTQNPSSIAFLE
        EVW  N + E+  +  CL+    ++IDTEFPGC++ TP  + +E  Y D++FNV+ T LIQLG T  D  G  A +WE N SDFD     +N  SIAFL+
Subjt:  EVWASNFDHEILRLERCLQANHILSIDTEFPGCIRSTPWGSIDERVYEDLRFNVNQTKLIQLGLTASDESGQVAGSWEFNFSDFDHQIDTQNPSSIAFLE

Query:  QNGLDFAKLKKQGIPLSLFTLNFSRIIRRSRVR-KWVTFHGLYDIGYLVKAMGVAEELPESMEEFAEMVARGVG-VVRDLKEVARWCEGLEQGRVGLERL
         NGL+  K++++GI +  F  +FS+I+     +  WV F G YD  YLVK +   + LPE+ EEF E V + +G  V D+K++A  C GL   + GL+R+
Subjt:  QNGLDFAKLKKQGIPLSLFTLNFSRIIRRSRVR-KWVTFHGLYDIGYLVKAMGVAEELPESMEEFAEMVARGVG-VVRDLKEVARWCEGLEQGRVGLERL

Query:  GELLGEKRFGMKHHAGSDSLLTAFVHAKM
         ++L  KR G  HHAGSDS LTA V  K+
Subjt:  GELLGEKRFGMKHHAGSDSLLTAFVHAKM

AT1G27890.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.4e-4643.67Show/hide
Query:  EVWASNFDHEILRLERCLQANHILSIDTEFPGCIRSTPWGSIDERVYEDLRFNVNQTKLIQLGLTASDESGQVAGSWEFNFSDFDHQIDTQNPSSIAFLE
        EVW  N + E+  +  CL+    ++IDTEFPGC++ TP  + +E  Y D++FNV+ T LIQLG T  D  G +  +WE N SDF+     +N  SIAFL+
Subjt:  EVWASNFDHEILRLERCLQANHILSIDTEFPGCIRSTPWGSIDERVYEDLRFNVNQTKLIQLGLTASDESGQVAGSWEFNFSDFDHQIDTQNPSSIAFLE

Query:  QNGLDFAKLKKQGIPLSLFTLNFSRIIRRSRVR-KWVTFHGLYDIGYLVKAMGVAEELPESMEEFAEMVARGVG-VVRDLKEVARWCEGLEQGRVGLERL
         NGL+  K+ ++GI +  F  +FS+I++    +  WV F G YD  YLVK +   + LPE+ EEF E V + +G  V D+K++A  C GL   R GL+R+
Subjt:  QNGLDFAKLKKQGIPLSLFTLNFSRIIRRSRVR-KWVTFHGLYDIGYLVKAMGVAEELPESMEEFAEMVARGVG-VVRDLKEVARWCEGLEQGRVGLERL

Query:  GELLGEKRFGMKHHAGSDSLLTAFVHAKM
         ++L  KR G  HHAGSDS LTA V  K+
Subjt:  GELLGEKRFGMKHHAGSDSLLTAFVHAKM

AT1G61470.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.0e-4643.23Show/hide
Query:  EVWASNFDHEILRLERCLQANHILSIDTEFPGCIRSTPWGSIDERVYEDLRFNVNQTKLIQLGLTASDESGQVAGSWEFNFSDFDHQIDTQNPSSIAFLE
        EVW  N   E+  +  CL+  + ++IDTEFPGC++ TP  + DE  Y D++FNV+ T LIQLGLT   +   +  +WE N SDF+     +N  SIAFL+
Subjt:  EVWASNFDHEILRLERCLQANHILSIDTEFPGCIRSTPWGSIDERVYEDLRFNVNQTKLIQLGLTASDESGQVAGSWEFNFSDFDHQIDTQNPSSIAFLE

Query:  QNGLDFAKLKKQGIPLSLFTLNFSRIIRRSRVR-KWVTFHGLYDIGYLVKAMGVAEELPESMEEFAEMVARGVG-VVRDLKEVARWCEGLEQGRVGLERL
         NGLD  K++++GI +  F + FS+I+     + +WVTF G YD  YL+K +   + LPE+ +EF E V + +G  V D+K++A  C GL   R GL+R+
Subjt:  QNGLDFAKLKKQGIPLSLFTLNFSRIIRRSRVR-KWVTFHGLYDIGYLVKAMGVAEELPESMEEFAEMVARGVG-VVRDLKEVARWCEGLEQGRVGLERL

Query:  GELLGEKRFGMKHHAGSDSLLTAFVHAKM
         ++L  +R G  HHAGSDS LTA V  K+
Subjt:  GELLGEKRFGMKHHAGSDSLLTAFVHAKM

AT3G44240.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.6e-4645.7Show/hide
Query:  LERCLQANHILSIDTEFPGCIRSTPWGSIDERVYEDLRFNVNQTKLIQLGLTASDESGQVAGSWEFNFSDFDHQIDTQNPSSIAFLEQNGLDFAKLKKQG
        +E CL++   ++IDTEFP  +R T   + DE  Y D+ F+V++ KLIQLGLT  D +G++ G+WE NFSDF    D +N  SI FL +NGLD  K++++G
Subjt:  LERCLQANHILSIDTEFPGCIRSTPWGSIDERVYEDLRFNVNQTKLIQLGLTASDESGQVAGSWEFNFSDFDHQIDTQNPSSIAFLEQNGLDFAKLKKQG

Query:  IPLSLFTLNFSRIIRRSRVR-KWVTFHGLYDIGYLVKAMGVAEELPESMEEFAEMVARGVGVVRDLKEVARWCEGLEQGRVGLERLGELLGEKRFGMKHH
        I +  F      +++++R    WVTFHG YDI YL+K     E LP + E F++ VAR +G V DLK +A  CEGL   R+GLE L    G  R G  HH
Subjt:  IPLSLFTLNFSRIIRRSRVR-KWVTFHGLYDIGYLVKAMGVAEELPESMEEFAEMVARGVGVVRDLKEVARWCEGLEQGRVGLERLGELLGEKRFGMKHH

Query:  AGSDSLLTAFVHAKMARWFRL
        AGS++ LTA V AK+   F L
Subjt:  AGSDSLLTAFVHAKMARWFRL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAGAAGAAATCGAGAGCGTCCGAGAAGAAGAACACCTTCGATCCAAGAAGTTTGGGCTTCCAATTTCGATCATGAAATCCTCCGCCTCGAACGCTGCCTTCAAGC
TAACCATATCCTATCCATCGACACCGAATTTCCTGGGTGCATTAGGAGCACCCCATGGGGCTCGATCGATGAACGCGTCTACGAAGATCTCCGCTTCAACGTGAACCAAA
CGAAGTTAATTCAACTGGGTTTAACAGCTTCTGATGAATCTGGGCAAGTCGCCGGCTCATGGGAGTTCAACTTCTCCGATTTCGACCATCAAATCGACACTCAAAATCCT
TCATCGATTGCGTTTCTGGAACAGAACGGGCTGGATTTTGCGAAGCTCAAGAAGCAGGGGATCCCCTTAAGCCTATTCACTCTAAACTTCTCGCGTATCATACGAAGAAG
CCGTGTTCGTAAATGGGTCACATTCCATGGATTATACGATATTGGGTATCTTGTGAAGGCAATGGGGGTAGCGGAGGAGTTGCCGGAATCAATGGAGGAATTTGCAGAGA
TGGTGGCGCGTGGAGTGGGGGTTGTGAGGGATTTGAAGGAGGTGGCTCGGTGGTGCGAAGGGCTGGAACAGGGGAGGGTTGGGCTTGAGAGACTTGGGGAATTGCTGGGC
GAGAAGCGGTTTGGGATGAAGCACCATGCTGGTTCGGATAGCTTGTTGACGGCTTTTGTGCATGCGAAGATGGCGCGGTGGTTCCGTTTGGAATCAGAGGCGTATGACGG
CCATTTGTATGGGCTTCGGAACAAGCTCCAGTACATGAATGAAGTTATCGAGTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTAGAAGAAATCGAGAGCGTCCGAGAAGAAGAACACCTTCGATCCAAGAAGTTTGGGCTTCCAATTTCGATCATGAAATCCTCCGCCTCGAACGCTGCCTTCAAGC
TAACCATATCCTATCCATCGACACCGAATTTCCTGGGTGCATTAGGAGCACCCCATGGGGCTCGATCGATGAACGCGTCTACGAAGATCTCCGCTTCAACGTGAACCAAA
CGAAGTTAATTCAACTGGGTTTAACAGCTTCTGATGAATCTGGGCAAGTCGCCGGCTCATGGGAGTTCAACTTCTCCGATTTCGACCATCAAATCGACACTCAAAATCCT
TCATCGATTGCGTTTCTGGAACAGAACGGGCTGGATTTTGCGAAGCTCAAGAAGCAGGGGATCCCCTTAAGCCTATTCACTCTAAACTTCTCGCGTATCATACGAAGAAG
CCGTGTTCGTAAATGGGTCACATTCCATGGATTATACGATATTGGGTATCTTGTGAAGGCAATGGGGGTAGCGGAGGAGTTGCCGGAATCAATGGAGGAATTTGCAGAGA
TGGTGGCGCGTGGAGTGGGGGTTGTGAGGGATTTGAAGGAGGTGGCTCGGTGGTGCGAAGGGCTGGAACAGGGGAGGGTTGGGCTTGAGAGACTTGGGGAATTGCTGGGC
GAGAAGCGGTTTGGGATGAAGCACCATGCTGGTTCGGATAGCTTGTTGACGGCTTTTGTGCATGCGAAGATGGCGCGGTGGTTCCGTTTGGAATCAGAGGCGTATGACGG
CCATTTGTATGGGCTTCGGAACAAGCTCCAGTACATGAATGAAGTTATCGAGTCTTAA
Protein sequenceShow/hide protein sequence
MGRRNRERPRRRTPSIQEVWASNFDHEILRLERCLQANHILSIDTEFPGCIRSTPWGSIDERVYEDLRFNVNQTKLIQLGLTASDESGQVAGSWEFNFSDFDHQIDTQNP
SSIAFLEQNGLDFAKLKKQGIPLSLFTLNFSRIIRRSRVRKWVTFHGLYDIGYLVKAMGVAEELPESMEEFAEMVARGVGVVRDLKEVARWCEGLEQGRVGLERLGELLG
EKRFGMKHHAGSDSLLTAFVHAKMARWFRLESEAYDGHLYGLRNKLQYMNEVIES