; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh02G002610 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G002610
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionPre-mRNA-splicing factor SYF2
Genome locationCmo_Chr02:1253118..1255988
RNA-Seq ExpressionCmoCh02G002610
SyntenyCmoCh02G002610
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0000974 - Prp19 complex (cellular component)
GO:0071013 - catalytic step 2 spliceosome (cellular component)
GO:0071014 - post-mRNA release spliceosomal complex (cellular component)
InterPro domainsIPR013260 - mRNA splicing factor SYF2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7027023.1 Pre-mRNA-splicing factor syf2 [Cucurbita argyrosperma subsp. argyrosperma]1.5e-17299.68Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKL
        MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKL
Subjt:  MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKL

Query:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLENRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT
        TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLE+RKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT
Subjt:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLENRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT

Query:  LYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

XP_022947463.1 pre-mRNA-splicing factor syf2-like [Cucurbita moschata]3.8e-173100Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKL
        MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKL
Subjt:  MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKL

Query:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLENRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT
        TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLENRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT
Subjt:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLENRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT

Query:  LYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

XP_022971056.1 pre-mRNA-splicing factor syf2-like [Cucurbita maxima]1.5e-16997.78Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKL
        MSDEGRVHPDCRNASNPYHECSEYCF+IIAEVKA NQ+NEPVATSSEAVQAGRSSAP NFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKL
Subjt:  MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKL

Query:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLENRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT
        TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPP+ESRGISKQKWLE+RKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT
Subjt:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLENRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT

Query:  LYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LYDAYKKRTKNVNVD+EEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

XP_023532640.1 pre-mRNA-splicing factor syf2-like [Cucurbita pepo subsp. pepo]1.6e-17199.37Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKL
        MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSG ENVEGDFTKL
Subjt:  MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKL

Query:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLENRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT
        TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLE RKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT
Subjt:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLENRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT

Query:  LYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

XP_023532641.1 pre-mRNA-splicing factor syf2-like [Cucurbita pepo subsp. pepo]1.6e-17199.37Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKL
        MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSG ENVEGDFTKL
Subjt:  MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKL

Query:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLENRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT
        TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLE RKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT
Subjt:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLENRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT

Query:  LYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

TrEMBL top hitse value%identityAlignment
A0A0A0LJ81 Pre-mRNA-splicing factor SYF22.3e-16393.33Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKL
        MSDEGRVHPDCRNASNPYHECSEYCF++IAE+KAR+Q+NEPV TSSE VQAGRSS  S+F PPDEYEDLHDEKP+EEGHSDGD DK SG ENVEGDFTKL
Subjt:  MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKL

Query:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLENRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT
        TGRKKKLFE+RLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLE+RKKKIGKLLDANGLDMTKAYMLDTQEAAE+KYKKWEKDPAPYGWDVFNQKT
Subjt:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLENRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT

Query:  LYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LY+AYKKRTKNVN+DLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDR+EKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

A0A6J1FXE9 Pre-mRNA-splicing factor SYF22.2e-16695.56Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKL
        MSDEGRVHPDCRNASNPYHEC+EYCF++IAEVKARNQQNEPV TSSE VQAGRSS  SNF PPDEYEDL DEKP EEGHSDGDTDK SGGENVEGDFTKL
Subjt:  MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKL

Query:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLENRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT
        TGRKKKLFE+RLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLE+RKKKIGKLLDANGLDM+KAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT
Subjt:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLENRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT

Query:  LYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

A0A6J1G6N2 Pre-mRNA-splicing factor SYF21.9e-173100Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKL
        MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKL
Subjt:  MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKL

Query:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLENRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT
        TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLENRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT
Subjt:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLENRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT

Query:  LYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

A0A6J1I290 Pre-mRNA-splicing factor SYF27.3e-17097.78Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKL
        MSDEGRVHPDCRNASNPYHECSEYCF+IIAEVKA NQ+NEPVATSSEAVQAGRSSAP NFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKL
Subjt:  MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKL

Query:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLENRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT
        TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPP+ESRGISKQKWLE+RKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT
Subjt:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLENRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT

Query:  LYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LYDAYKKRTKNVNVD+EEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

A0A6J1JD37 Pre-mRNA-splicing factor SYF24.9e-16695.24Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKL
        MSDEGRVHPDCRNASNPYHEC+EYCF++IAEVKARNQQNEPV TSSE VQAGRSS  SNF PPDEYEDL DEKP EEGHSDGDTDK SGGENVEGDFTKL
Subjt:  MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKL

Query:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLENRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT
        TGRKKKLFE+RLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLE+RKKKIGKLLDANGLDM+KAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT
Subjt:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLENRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKT

Query:  LYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LYDAYKKRTKNVNVDLEEYNKMK+SDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

SwissProt top hitse value%identityAlignment
Q28G05 Pre-mRNA-splicing factor syf23.6e-2539.27Show/hide
Query:  KLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLENRKKKIGKLLDANGLDMTKAYMLD--TQEAAESKYKKWEKDPAPYGWD
        K   R +K  EL LK NEARK N   +  E K+ + PS  E+R    +  L+  +KK  +   ANG+D  +A +L+   ++A   + KK  K+P   G+ 
Subjt:  KLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLENRKKKIGKLLDANGLDMTKAYMLD--TQEAAESKYKKWEKDPAPYGWD

Query:  VFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIER
         +    L   Y++ TK +  D+EEY   K+   E +   S   Y      S+  ID MV +L+ + EKR+ +SRRR +++D DID IN+RN  FNKK ER
Subjt:  VFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIER

Query:  AFGRYTLEIKNNLERGTAL
         +G+YT EIK NLERGTA+
Subjt:  AFGRYTLEIKNNLERGTAL

Q6DGP2 Pre-mRNA-splicing factor syf21.5e-2336.57Show/hide
Query:  RKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS----ESRGISKQKWLENRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQ
        R +K  EL  K NEARK N   +  E K+++ PS    +   +  +  ++ +KK+  +       D  K   +  ++A   + KK +++P P G+  + +
Subjt:  RKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS----ESRGISKQKWLENRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQ

Query:  KTLYDAYKKRTKNVNVDLEEYNKMKES-DPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFG
          L   Y++ TK +  D+E Y K KE    +F+  ++SL YG     S+D I+ MV +++ + EKR  +SRRR +++D DID IN+RN  FNKK ER +G
Subjt:  KTLYDAYKKRTKNVNVDLEEYNKMKES-DPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFG

Query:  RYTLEIKNNLERGTAL
        +YT EIK NLERGTA+
Subjt:  RYTLEIKNNLERGTAL

Q6DV01 Pre-mRNA-splicing factor syf21.5e-2337.44Show/hide
Query:  KKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLENRKKKIGKLLDANGLDMTKAYMLD-TQEAAESKYKKWEKDPAPYGWDVFNQKTLYD
        +K  EL LK NEARK N   +  E K+++ P+       +   E + ++  K   A G D  +  +L+ + E AE   +K +K     G+  +    +  
Subjt:  KKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLENRKKKIGKLLDANGLDMTKAYMLD-TQEAAESKYKKWEKDPAPYGWDVFNQKTLYD

Query:  AYKKRTKNVNVDLEEYNKMK-ESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYTLE
         Y++ T+ +  DLE+Y K++ ES  EFY  ++SL +G      E  +D MV++L+ + +KR+ +SRRR +++D DID IN+RN  FNKK ER +G+YT E
Subjt:  AYKKRTKNVNVDLEEYNKMK-ESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYTLE

Query:  IKNNLERGTAL
        IK NLERGTA+
Subjt:  IKNNLERGTAL

Q8AVQ6 Pre-mRNA-splicing factor syf21.9e-2640.18Show/hide
Query:  KLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLENRKKKIGKLLDANGLDMTKAYMLD--TQEAAESKYKKWEKDPAPYGWD
        K   R +K  EL LK NEARK N   +  E K+ + PS  E+R    +  L+N +KK  +   ANG+D  +A +L+   ++A   + KK  K+P   G+ 
Subjt:  KLTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLENRKKKIGKLLDANGLDMTKAYMLD--TQEAAESKYKKWEKDPAPYGWD

Query:  VFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIER
         +    L   Y++ TK +  D+EEY   KE   E +   S   Y      S+  ID MV +L+ + EKR+ +SRRR +++D DID IN+RN  FNKK ER
Subjt:  VFNQKTLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIER

Query:  AFGRYTLEIKNNLERGTAL
         +G+YT EIK NLERGTA+
Subjt:  AFGRYTLEIKNNLERGTAL

Q9D198 Pre-mRNA-splicing factor SYF22.6e-2339.07Show/hide
Query:  RKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLENRKKKIGKLLDANGLDMTKAYMLD-TQEAAESKYKKWEKDPAPYGWDVFNQK
        R +K  EL LK NEARK N   +  E K+++ P+  E++    +  L+  +KK  K   A G D  K  +L+ + E AE   ++ +K     G+  +   
Subjt:  RKKKLFELRLKMNEARKANQTAIAAEKKKMEPPS--ESRGISKQKWLENRKKKIGKLLDANGLDMTKAYMLD-TQEAAESKYKKWEKDPAPYGWDVFNQK

Query:  TLYDAYKKRTKNVNVDLEEYNKMKESDPE-FYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR
         L   Y + TK +  D+E Y + +E   E F+  ++SL +G     SE+ ID MV +L+ + EKR  +SRRR +++D DID IN+RN  FNKK ER +G+
Subjt:  TLYDAYKKRTKNVNVDLEEYNKMKESDPE-FYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR

Query:  YTLEIKNNLERGTAL
        YT EIK NLERGTA+
Subjt:  YTLEIKNNLERGTAL

Arabidopsis top hitse value%identityAlignment
AT2G16860.1 GCIP-interacting family protein3.5e-11670.57Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKAR-NQQNEPVATSSEAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTK
        M  E RVHPDC NASNPYHEC EYCF+ IAE KAR  +QN  +A   E  +           P D+     D   EEE   D    ++        D T+
Subjt:  MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKAR-NQQNEPVATSSEAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTK

Query:  LTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLENRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQK
        LTGR+KKLFELRLKMNEARK+NQT + +EKKKME P+E++GISKQKWLE RKKKIGKLLDANGLDMT+AYMLDTQEAAESKYKKWEK+P P GWDVFNQK
Subjt:  LTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLENRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQK

Query:  TLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRY
        TLY+AYKKRTKN+ VDLEEYN+M+ +DPEFYREASSLQYGKAPK S+DKID M KEL DRE+KR+ FSRRRKF E+KDIDSINDRNEHFNKKIERAFG+Y
Subjt:  TLYDAYKKRTKNVNVDLEEYNKMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRY

Query:  TLEIKNNLERGTALPD
        TLEIKNNLERGTALPD
Subjt:  TLEIKNNLERGTALPD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGACGAAGGAAGAGTACACCCTGATTGTAGAAATGCTTCTAATCCTTATCATGAATGTAGCGAGTACTGCTTTGAAATAATAGCAGAAGTCAAAGCCCGGAATCA
GCAAAATGAGCCAGTTGCCACTTCATCAGAAGCTGTTCAAGCTGGTCGAAGTAGTGCTCCTTCCAATTTTGCGCCTCCTGACGAGTATGAAGATCTTCATGATGAAAAGC
CTGAAGAAGAAGGGCATAGTGATGGTGATACTGACAAATTGAGTGGTGGGGAGAATGTGGAAGGAGACTTCACAAAACTTACAGGGAGGAAAAAGAAATTGTTTGAACTC
AGGCTTAAGATGAATGAGGCACGAAAAGCTAATCAGACAGCAATAGCTGCTGAAAAAAAGAAAATGGAACCTCCATCAGAATCAAGAGGCATTTCTAAACAAAAGTGGCT
TGAGAATCGGAAGAAGAAAATCGGGAAGCTTTTGGATGCGAATGGCTTGGATATGACAAAAGCATACATGTTAGATACACAAGAGGCAGCAGAGTCCAAATATAAGAAAT
GGGAGAAGGATCCAGCTCCCTATGGATGGGATGTTTTTAACCAGAAAACGTTGTATGATGCATACAAAAAGCGGACGAAGAATGTAAATGTTGACCTTGAGGAATATAAT
AAAATGAAAGAATCTGATCCTGAGTTCTACCGTGAGGCTTCAAGTCTTCAATATGGAAAGGCACCTAAGATTTCAGAGGATAAGATTGACAATATGGTGAAAGAACTCAA
GGACCGGGAGGAGAAGCGAAAGTCGTTTAGCCGTAGGAGGAAGTTCCATGAAGACAAGGATATCGATTCTATCAATGATCGTAATGAACATTTCAACAAAAAGATCGAGC
GGGCCTTTGGTAGATATACTCTGGAGATCAAAAACAATCTTGAGCGAGGAACTGCATTGCCTGATTAA
mRNA sequenceShow/hide mRNA sequence
TGAGCAATTGTTCTTCGTTCTTCCCAAATCGGGAACGGAACCTCTTCTGCTCTCTTCTTCGAGTTCTTCCCGCGCGGAAAACCTAGATTTCAGCGAGTAAGAGACGTTGT
TGCAGAGATGTCTGACGAAGGAAGAGTACACCCTGATTGTAGAAATGCTTCTAATCCTTATCATGAATGTAGCGAGTACTGCTTTGAAATAATAGCAGAAGTCAAAGCCC
GGAATCAGCAAAATGAGCCAGTTGCCACTTCATCAGAAGCTGTTCAAGCTGGTCGAAGTAGTGCTCCTTCCAATTTTGCGCCTCCTGACGAGTATGAAGATCTTCATGAT
GAAAAGCCTGAAGAAGAAGGGCATAGTGATGGTGATACTGACAAATTGAGTGGTGGGGAGAATGTGGAAGGAGACTTCACAAAACTTACAGGGAGGAAAAAGAAATTGTT
TGAACTCAGGCTTAAGATGAATGAGGCACGAAAAGCTAATCAGACAGCAATAGCTGCTGAAAAAAAGAAAATGGAACCTCCATCAGAATCAAGAGGCATTTCTAAACAAA
AGTGGCTTGAGAATCGGAAGAAGAAAATCGGGAAGCTTTTGGATGCGAATGGCTTGGATATGACAAAAGCATACATGTTAGATACACAAGAGGCAGCAGAGTCCAAATAT
AAGAAATGGGAGAAGGATCCAGCTCCCTATGGATGGGATGTTTTTAACCAGAAAACGTTGTATGATGCATACAAAAAGCGGACGAAGAATGTAAATGTTGACCTTGAGGA
ATATAATAAAATGAAAGAATCTGATCCTGAGTTCTACCGTGAGGCTTCAAGTCTTCAATATGGAAAGGCACCTAAGATTTCAGAGGATAAGATTGACAATATGGTGAAAG
AACTCAAGGACCGGGAGGAGAAGCGAAAGTCGTTTAGCCGTAGGAGGAAGTTCCATGAAGACAAGGATATCGATTCTATCAATGATCGTAATGAACATTTCAACAAAAAG
ATCGAGCGGGCCTTTGGTAGATATACTCTGGAGATCAAAAACAATCTTGAGCGAGGAACTGCATTGCCTGATTAAGGTATTTTGTTTATATGAGGCTCTGGCTCAATTAT
ACATGCATGCATGCATACATTCTTTTTACTCTTGCCCACCTTTCTCTGGTATGTGCTGTGCTGAATATACTTCTCACGAGGAGAGACAAGATGTGAGATTCCCACATCGG
TTAGAGAGGGGAAAGTAGAACAAAACATTCTTTAAAAGGGTGTGAAAACTTCTTTCTAGCCGGCGTGTTTTAAAAACCTTGAGGGAAAGCCCAAAAGAGAAAGCCTAAAG
AGGACAATATCTACTAGCAGTGGGCGGGCCGTTACGTGTATTCTATGCTATGCTACGCTGAAATTACATATTTCTTTGTAAGCATGGCTTGGTGCACTTGATTAAATTTT
ATTTCGTGTAGGCTTTTTGAATCCAAGTAGTGGGGAGGTATTTAAAGCAGTTGATTTGTACGCAAAGCTATAGAAAGTGATTGTAAGTGATTTTGTTTTTAATATGACTA
TGAATTCACATTAGAAAAGAATTCTCTCC
Protein sequenceShow/hide protein sequence
MSDEGRVHPDCRNASNPYHECSEYCFEIIAEVKARNQQNEPVATSSEAVQAGRSSAPSNFAPPDEYEDLHDEKPEEEGHSDGDTDKLSGGENVEGDFTKLTGRKKKLFEL
RLKMNEARKANQTAIAAEKKKMEPPSESRGISKQKWLENRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKDPAPYGWDVFNQKTLYDAYKKRTKNVNVDLEEYN
KMKESDPEFYREASSLQYGKAPKISEDKIDNMVKELKDREEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD