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CmoCh02G003010 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G003010
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRibonuclease H-like domain-containing protein
Genome locationCmo_Chr02:1506301..1507465
RNA-Seq ExpressionCmoCh02G003010
SyntenyCmoCh02G003010
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GEU51005.1 ribonuclease H-like domain-containing protein [Tanacetum cinerariifolium]1.2e-0469.23Show/hide
Query:  INTNLVVDNHSDLVKVVAVPVVGRKTDCDARGPIYNVSV
        I  +LVVDN SDLVKVVA P+VG++T  DARGPIY+VS+
Subjt:  INTNLVVDNHSDLVKVVAVPVVGRKTDCDARGPIYNVSV
GEZ26382.1 DNA helicase [Tanacetum cinerariifolium]1.2e-0477.78Show/hide
Query:  NLVVDNHSDLVKVVAVPVVGRKTDCDARGPIYNVSV
        +LVVDN SDLVKVVA PVVG++T  DARGPIY+VSV
Subjt:  NLVVDNHSDLVKVVAVPVVGRKTDCDARGPIYNVSV
KAC9261796.1 hypothetical protein E3N88_46076 [Mikania micrantha]1.2e-0477.78Show/hide
Query:  NLVVDNHSDLVKVVAVPVVGRKTDCDARGPIYNVSV
        +LVVDN SDLVKVVA PVVG++T  DARGPIY+VSV
Subjt:  NLVVDNHSDLVKVVAVPVVGRKTDCDARGPIYNVSV
KAF3666783.1 hypothetical protein FXO38_08920 [Capsicum annuum]9.0e-0575.68Show/hide
Query:  TNLVVDNHSDLVKVVAVPVVGRKTDCDARGPIYNVSV
        T+LVVDN SDLVKVVA PVVG++   DARGPIY+VSV
Subjt:  TNLVVDNHSDLVKVVAVPVVGRKTDCDARGPIYNVSV
KAF3772037.1 hypothetical protein EJ110_NYTH58929 [Nymphaea thermarum]1.1e-0580.56Show/hide
Query:  NLVVDNHSDLVKVVAVPVVGRKTDCDARGPIYNVSV
        +LVVDN SDLVKVVA PVVG++TD DARGPIY+VSV
Subjt:  NLVVDNHSDLVKVVAVPVVGRKTDCDARGPIYNVSV
TrEMBL top hitse value%identityAlignment
A0A2G3ABQ7 Putative cytochrome c biosynthesis protein6.3e-0472.22Show/hide
Query:  NLVVDNHSDLVKVVAVPVVGRKTDCDARGPIYNVSV
        +LVVDN SDLVKVV  PVVG++T  DA GPIY+VSV
Subjt:  NLVVDNHSDLVKVVAVPVVGRKTDCDARGPIYNVSV
A0A5N6L7I5 Uncharacterized protein5.7e-0577.78Show/hide
Query:  NLVVDNHSDLVKVVAVPVVGRKTDCDARGPIYNVSV
        +LVVDN SDLVKVVA PVVG++T  DARGPIY+VSV
Subjt:  NLVVDNHSDLVKVVAVPVVGRKTDCDARGPIYNVSV
A0A6L2KSK9 Ribonuclease H-like domain-containing protein5.7e-0569.23Show/hide
Query:  INTNLVVDNHSDLVKVVAVPVVGRKTDCDARGPIYNVSV
        I  +LVVDN SDLVKVVA P+VG++T  DARGPIY+VS+
Subjt:  INTNLVVDNHSDLVKVVAVPVVGRKTDCDARGPIYNVSV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CGATATGATTTCATTGACAATGCATATATAAATACAAATCTTGTGGTCGACAATCACTCAGACTTGGTAAAGGTTGTCGCAGTACCTGTAGTAGGACGGAAGACTGATTG
CGATGCTCGCGGACCAATTTACAATGTCTCCGTGTTGATGTCCACACGCTCTATCATTCGTATAGTAACCTCGAATTATTTATAA
mRNA sequenceShow/hide mRNA sequence
CGATATGATTTCATTGACAATGCATATATAAATACAAATCTTGTGGTCGACAATCACTCAGACTTGGTAAAGGTTGTCGCAGTACCTGTAGTAGGACGGAAGACTGATTG
CGATGCTCGCGGACCAATTTACAATGTCTCCGTGTTGATGTCCACACGCTCTATCATTCGTATAGTAACCTCGAATTATTTATAA
Protein sequenceShow/hide protein sequence
RYDFIDNAYINTNLVVDNHSDLVKVVAVPVVGRKTDCDARGPIYNVSVLMSTRSIIRIVTSNYL