; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh02G003240 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G003240
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptiontranscription factor bHLH121-like
Genome locationCmo_Chr02:1676112..1678939
RNA-Seq ExpressionCmoCh02G003240
SyntenyCmoCh02G003240
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0055072 - iron ion homeostasis (biological process)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR044579 - Transcription factor bHLH11/121


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605005.1 Transcription factor basic helix-loop-helix 121, partial [Cucurbita argyrosperma subsp. sororia]9.7e-7764.14Show/hide
Query:  MDQRRDAPIPNPVTPSIELSGHPNRSQSSSRSVLESAISNSFCF--------------------------------------------------------
        MDQRR   IPN VTPSIELSGHPNRSQSSS + L + IS  FCF                                                        
Subjt:  MDQRRDAPIPNPVTPSIELSGHPNRSQSSSRSVLESAISNSFCF--------------------------------------------------------

Query:  ---------------------------SDLAQEKNDLREEKASLKSDIENLNSQYQQRLMATNSIVMAPA--PFPFPMPMPPGPFPLHPTSQPYMFFGNQ
                                    +LAQEKNDLREEKASLKSDIENLNSQYQQRLMATNSIVMAPA  PFP PMPMPPGPFPLHPTSQPYMFFGNQ
Subjt:  ---------------------------SDLAQEKNDLREEKASLKSDIENLNSQYQQRLMATNSIVMAPA--PFPFPMPMPPGPFPLHPTSQPYMFFGNQ

Query:  NPGVIANPCSPFVQYIAPNSMAEQQSSRNAPPFVHPSNHDSSF--SNDTNRNENNPSEVELEESSSSECSLSRSLEANSFSSTLNGRKTT
        NPGVIANPCSPFVQYIAPNSMAEQQS+RNAPPFVHPSNHDSSF  SNDTNRNENNPSEVELEESSSSEC LSRSLEANSFSSTLNGRKTT
Subjt:  NPGVIANPCSPFVQYIAPNSMAEQQSSRNAPPFVHPSNHDSSF--SNDTNRNENNPSEVELEESSSSECSLSRSLEANSFSSTLNGRKTT

XP_008457648.1 PREDICTED: transcription factor bHLH121 isoform X1 [Cucumis melo]3.6e-3953.77Show/hide
Query:  DLAQEKNDLREEKASLKSDIENLNSQYQQRLMAT-------NSIVMAPAPFPFPMPM--PPGPFPLHPTSQPYMFFGNQNPGVIANPCSPFVQYIAPNSM
        +LAQEK+DLREEKA LKSDIENLN+QYQQ+L AT       +S+VMAPAPFPFPMPM  PPGP+PLHP+ QPY FFGN +P VIANPCS FV YI PNS+
Subjt:  DLAQEKNDLREEKASLKSDIENLNSQYQQRLMAT-------NSIVMAPAPFPFPMPM--PPGPFPLHPTSQPYMFFGNQNPGVIANPCSPFVQYIAPNSM

Query:  AEQQSSRNAPPFVHPSN-------------------------------------------HDSSF--SNDTNRNENNPSEVELEESSSSECSLSRSLEAN
         EQQSS+NAPPF+   N                                            D+S+  +ND NR E+N S    EESSSS CS SRSLEAN
Subjt:  AEQQSSRNAPPFVHPSN-------------------------------------------HDSSF--SNDTNRNENNPSEVELEESSSSECSLSRSLEAN

Query:  SFSSTLNGRKTT
        S SS  +GRK+T
Subjt:  SFSSTLNGRKTT

XP_008457649.1 PREDICTED: transcription factor bHLH121 isoform X2 [Cucumis melo]3.6e-3953.77Show/hide
Query:  DLAQEKNDLREEKASLKSDIENLNSQYQQRLMAT-------NSIVMAPAPFPFPMPM--PPGPFPLHPTSQPYMFFGNQNPGVIANPCSPFVQYIAPNSM
        +LAQEK+DLREEKA LKSDIENLN+QYQQ+L AT       +S+VMAPAPFPFPMPM  PPGP+PLHP+ QPY FFGN +P VIANPCS FV YI PNS+
Subjt:  DLAQEKNDLREEKASLKSDIENLNSQYQQRLMAT-------NSIVMAPAPFPFPMPM--PPGPFPLHPTSQPYMFFGNQNPGVIANPCSPFVQYIAPNSM

Query:  AEQQSSRNAPPFVHPSN-------------------------------------------HDSSF--SNDTNRNENNPSEVELEESSSSECSLSRSLEAN
         EQQSS+NAPPF+   N                                            D+S+  +ND NR E+N S    EESSSS CS SRSLEAN
Subjt:  AEQQSSRNAPPFVHPSN-------------------------------------------HDSSF--SNDTNRNENNPSEVELEESSSSECSLSRSLEAN

Query:  SFSSTLNGRKTT
        S SS  +GRK+T
Subjt:  SFSSTLNGRKTT

XP_022947480.1 transcription factor bHLH121-like [Cucurbita moschata]8.8e-62100Show/hide
Query:  MATNSIVMAPAPFPFPMPMPPGPFPLHPTSQPYMFFGNQNPGVIANPCSPFVQYIAPNSMAEQQSSRNAPPFVHPSNHDSSFSNDTNRNENNPSEVELEE
        MATNSIVMAPAPFPFPMPMPPGPFPLHPTSQPYMFFGNQNPGVIANPCSPFVQYIAPNSMAEQQSSRNAPPFVHPSNHDSSFSNDTNRNENNPSEVELEE
Subjt:  MATNSIVMAPAPFPFPMPMPPGPFPLHPTSQPYMFFGNQNPGVIANPCSPFVQYIAPNSMAEQQSSRNAPPFVHPSNHDSSFSNDTNRNENNPSEVELEE

Query:  SSSSECSLSRSLEANSFSSTLNGRKTT
        SSSSECSLSRSLEANSFSSTLNGRKTT
Subjt:  SSSSECSLSRSLEANSFSSTLNGRKTT

XP_023007544.1 transcription factor bHLH121-like [Cucurbita maxima]2.2e-7667.79Show/hide
Query:  MDQRRDAPIPNPVTPSIELSGHPNRSQSSSRSVLE---SAISNSFCFSD---------------------------------------------------
        MDQRRDAPIPNPVTPSIELSGHPNRSQSSSRS  E   SA + +   +D                                                   
Subjt:  MDQRRDAPIPNPVTPSIELSGHPNRSQSSSRSVLE---SAISNSFCFSD---------------------------------------------------

Query:  ------------LAQEKNDLREEKASLKSDIENLNSQYQQRLMATNSIVMAPAPFPFPMPMPPGPFPLHPTSQPYMFFGNQNPGVIANPCSPFVQYIAPN
                    LAQEKNDLREEKASLKSDIENLNSQYQQRLMATNSIVMAPAPFPF  PMPP PFPLHPTSQPYMFFGNQNP VIANPCSPFVQYIA N
Subjt:  ------------LAQEKNDLREEKASLKSDIENLNSQYQQRLMATNSIVMAPAPFPFPMPMPPGPFPLHPTSQPYMFFGNQNPGVIANPCSPFVQYIAPN

Query:  SMAEQQSSRNAPPFVHPSNHDSSF--SNDTNRNENNPSEVELEESSSSECSLSRSLEANSFSSTLNG
        SMAEQQ+SRNAPPFVHPS HDSSF  SNDTN NENNPSEVELEESSSSECSLSRSLEANSFSSTLNG
Subjt:  SMAEQQSSRNAPPFVHPSNHDSSF--SNDTNRNENNPSEVELEESSSSECSLSRSLEANSFSSTLNG

TrEMBL top hitse value%identityAlignment
A0A1S3C6M9 transcription factor bHLH121 isoform X11.7e-3953.77Show/hide
Query:  DLAQEKNDLREEKASLKSDIENLNSQYQQRLMAT-------NSIVMAPAPFPFPMPM--PPGPFPLHPTSQPYMFFGNQNPGVIANPCSPFVQYIAPNSM
        +LAQEK+DLREEKA LKSDIENLN+QYQQ+L AT       +S+VMAPAPFPFPMPM  PPGP+PLHP+ QPY FFGN +P VIANPCS FV YI PNS+
Subjt:  DLAQEKNDLREEKASLKSDIENLNSQYQQRLMAT-------NSIVMAPAPFPFPMPM--PPGPFPLHPTSQPYMFFGNQNPGVIANPCSPFVQYIAPNSM

Query:  AEQQSSRNAPPFVHPSN-------------------------------------------HDSSF--SNDTNRNENNPSEVELEESSSSECSLSRSLEAN
         EQQSS+NAPPF+   N                                            D+S+  +ND NR E+N S    EESSSS CS SRSLEAN
Subjt:  AEQQSSRNAPPFVHPSN-------------------------------------------HDSSF--SNDTNRNENNPSEVELEESSSSECSLSRSLEAN

Query:  SFSSTLNGRKTT
        S SS  +GRK+T
Subjt:  SFSSTLNGRKTT

A0A1S3C798 transcription factor bHLH121 isoform X21.7e-3953.77Show/hide
Query:  DLAQEKNDLREEKASLKSDIENLNSQYQQRLMAT-------NSIVMAPAPFPFPMPM--PPGPFPLHPTSQPYMFFGNQNPGVIANPCSPFVQYIAPNSM
        +LAQEK+DLREEKA LKSDIENLN+QYQQ+L AT       +S+VMAPAPFPFPMPM  PPGP+PLHP+ QPY FFGN +P VIANPCS FV YI PNS+
Subjt:  DLAQEKNDLREEKASLKSDIENLNSQYQQRLMAT-------NSIVMAPAPFPFPMPM--PPGPFPLHPTSQPYMFFGNQNPGVIANPCSPFVQYIAPNSM

Query:  AEQQSSRNAPPFVHPSN-------------------------------------------HDSSF--SNDTNRNENNPSEVELEESSSSECSLSRSLEAN
         EQQSS+NAPPF+   N                                            D+S+  +ND NR E+N S    EESSSS CS SRSLEAN
Subjt:  AEQQSSRNAPPFVHPSN-------------------------------------------HDSSF--SNDTNRNENNPSEVELEESSSSECSLSRSLEAN

Query:  SFSSTLNGRKTT
        S SS  +GRK+T
Subjt:  SFSSTLNGRKTT

A0A6J1CXY9 transcription factor bHLH121-like isoform X15.1e-3948.95Show/hide
Query:  ELSGHPNRSQSSSRSVLESAISNSFCFSDLAQEKNDLREEKASLKSDIENLNSQYQQRLMAT-------NSIVMAPAPFPFPMP--MPPGPFPLHPTSQP
        +L+   N+ ++ + ++ E +        +LAQEKNDLREEKASLKSDIENLN+QYQQRL AT       +S+V+AP PFPFP+P  MPPGPFP+HP+ QP
Subjt:  ELSGHPNRSQSSSRSVLESAISNSFCFSDLAQEKNDLREEKASLKSDIENLNSQYQQRLMAT-------NSIVMAPAPFPFPMP--MPPGPFPLHPTSQP

Query:  YMFFGNQNPGVIANPCSPFVQYIAPNSMAEQQSSRNAPPFVHPSN-------------------------------------------HDSSF----SND
        Y F GN NPGVIANPCS FV YI PNS+ EQQSSRN PPFVHP N                                            D+SF    S  
Subjt:  YMFFGNQNPGVIANPCSPFVQYIAPNSMAEQQSSRNAPPFVHPSN-------------------------------------------HDSSF----SND

Query:  TNRNENNPSEVELEESSSSECSLSRSLEANSFSSTLNGR
          R ENN S    EES SS CS S SLE NS SST NG+
Subjt:  TNRNENNPSEVELEESSSSECSLSRSLEANSFSSTLNGR

A0A6J1G707 transcription factor bHLH121-like4.2e-62100Show/hide
Query:  MATNSIVMAPAPFPFPMPMPPGPFPLHPTSQPYMFFGNQNPGVIANPCSPFVQYIAPNSMAEQQSSRNAPPFVHPSNHDSSFSNDTNRNENNPSEVELEE
        MATNSIVMAPAPFPFPMPMPPGPFPLHPTSQPYMFFGNQNPGVIANPCSPFVQYIAPNSMAEQQSSRNAPPFVHPSNHDSSFSNDTNRNENNPSEVELEE
Subjt:  MATNSIVMAPAPFPFPMPMPPGPFPLHPTSQPYMFFGNQNPGVIANPCSPFVQYIAPNSMAEQQSSRNAPPFVHPSNHDSSFSNDTNRNENNPSEVELEE

Query:  SSSSECSLSRSLEANSFSSTLNGRKTT
        SSSSECSLSRSLEANSFSSTLNGRKTT
Subjt:  SSSSECSLSRSLEANSFSSTLNGRKTT

A0A6J1L585 transcription factor bHLH121-like1.0e-7667.79Show/hide
Query:  MDQRRDAPIPNPVTPSIELSGHPNRSQSSSRSVLE---SAISNSFCFSD---------------------------------------------------
        MDQRRDAPIPNPVTPSIELSGHPNRSQSSSRS  E   SA + +   +D                                                   
Subjt:  MDQRRDAPIPNPVTPSIELSGHPNRSQSSSRSVLE---SAISNSFCFSD---------------------------------------------------

Query:  ------------LAQEKNDLREEKASLKSDIENLNSQYQQRLMATNSIVMAPAPFPFPMPMPPGPFPLHPTSQPYMFFGNQNPGVIANPCSPFVQYIAPN
                    LAQEKNDLREEKASLKSDIENLNSQYQQRLMATNSIVMAPAPFPF  PMPP PFPLHPTSQPYMFFGNQNP VIANPCSPFVQYIA N
Subjt:  ------------LAQEKNDLREEKASLKSDIENLNSQYQQRLMATNSIVMAPAPFPFPMPMPPGPFPLHPTSQPYMFFGNQNPGVIANPCSPFVQYIAPN

Query:  SMAEQQSSRNAPPFVHPSNHDSSF--SNDTNRNENNPSEVELEESSSSECSLSRSLEANSFSSTLNG
        SMAEQQ+SRNAPPFVHPS HDSSF  SNDTN NENNPSEVELEESSSSECSLSRSLEANSFSSTLNG
Subjt:  SMAEQQSSRNAPPFVHPSNHDSSF--SNDTNRNENNPSEVELEESSSSECSLSRSLEANSFSSTLNG

SwissProt top hitse value%identityAlignment
Q8W2F2 Transcription factor bHLH118.7e-0470.97Show/hide
Query:  DLAQEKNDLREEKASLKSDIENLNSQYQQRL
        +L QEK++LREEKA+LKSDIE LN+QYQ R+
Subjt:  DLAQEKNDLREEKASLKSDIENLNSQYQQRL

Q9LT23 Transcription factor bHLH1212.1e-2138.2Show/hide
Query:  ELSGHPNRSQSSSRSVLESAISNSFCFSDLAQEKNDLREEKASLKSDIENLNSQYQQRLMA--------TNSIVMAPAP-FPFPMP--MPPGPFPLHPTS
        EL+   N+ +S   ++ + +        +L QEKNDLREEK SLKSDIENLN QYQQRL +         ++++MAP P FP+PMP  MPPG  P+HP+ 
Subjt:  ELSGHPNRSQSSSRSVLESAISNSFCFSDLAQEKNDLREEKASLKSDIENLNSQYQQRLMA--------TNSIVMAPAP-FPFPMP--MPPGPFPLHPTS

Query:  QPYMFFGNQNPGVIANPCSPFVQYIAPNSMAEQQS--------SRNAPPFVHPSNHD-SSFSNDTN------------------------------RNEN
          Y +FGNQNP +I  PC  ++ Y+ PN++ EQQS        +R+  P    S    S  + D+N                              RN N
Subjt:  QPYMFFGNQNPGVIANPCSPFVQYIAPNSMAEQQS--------SRNAPPFVHPSNHD-SSFSNDTN------------------------------RNEN

Query:  NPSEVELEESS-SSECSLSRSLEANSFSSTLNG
        N S   +EESS SS+CS S S+  +S SS++ G
Subjt:  NPSEVELEESS-SSECSLSRSLEANSFSSTLNG

Arabidopsis top hitse value%identityAlignment
AT3G19860.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.5e-2238.2Show/hide
Query:  ELSGHPNRSQSSSRSVLESAISNSFCFSDLAQEKNDLREEKASLKSDIENLNSQYQQRLMA--------TNSIVMAPAP-FPFPMP--MPPGPFPLHPTS
        EL+   N+ +S   ++ + +        +L QEKNDLREEK SLKSDIENLN QYQQRL +         ++++MAP P FP+PMP  MPPG  P+HP+ 
Subjt:  ELSGHPNRSQSSSRSVLESAISNSFCFSDLAQEKNDLREEKASLKSDIENLNSQYQQRLMA--------TNSIVMAPAP-FPFPMP--MPPGPFPLHPTS

Query:  QPYMFFGNQNPGVIANPCSPFVQYIAPNSMAEQQS--------SRNAPPFVHPSNHD-SSFSNDTN------------------------------RNEN
          Y +FGNQNP +I  PC  ++ Y+ PN++ EQQS        +R+  P    S    S  + D+N                              RN N
Subjt:  QPYMFFGNQNPGVIANPCSPFVQYIAPNSMAEQQS--------SRNAPPFVHPSNHD-SSFSNDTN------------------------------RNEN

Query:  NPSEVELEESS-SSECSLSRSLEANSFSSTLNG
        N S   +EESS SS+CS S S+  +S SS++ G
Subjt:  NPSEVELEESS-SSECSLSRSLEANSFSSTLNG

AT3G19860.2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.5e-2238.2Show/hide
Query:  ELSGHPNRSQSSSRSVLESAISNSFCFSDLAQEKNDLREEKASLKSDIENLNSQYQQRLMA--------TNSIVMAPAP-FPFPMP--MPPGPFPLHPTS
        EL+   N+ +S   ++ + +        +L QEKNDLREEK SLKSDIENLN QYQQRL +         ++++MAP P FP+PMP  MPPG  P+HP+ 
Subjt:  ELSGHPNRSQSSSRSVLESAISNSFCFSDLAQEKNDLREEKASLKSDIENLNSQYQQRLMA--------TNSIVMAPAP-FPFPMP--MPPGPFPLHPTS

Query:  QPYMFFGNQNPGVIANPCSPFVQYIAPNSMAEQQS--------SRNAPPFVHPSNHD-SSFSNDTN------------------------------RNEN
          Y +FGNQNP +I  PC  ++ Y+ PN++ EQQS        +R+  P    S    S  + D+N                              RN N
Subjt:  QPYMFFGNQNPGVIANPCSPFVQYIAPNSMAEQQS--------SRNAPPFVHPSNHD-SSFSNDTN------------------------------RNEN

Query:  NPSEVELEESS-SSECSLSRSLEANSFSSTLNG
        N S   +EESS SS+CS S S+  +S SS++ G
Subjt:  NPSEVELEESS-SSECSLSRSLEANSFSSTLNG

AT4G36060.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein6.2e-0570.97Show/hide
Query:  DLAQEKNDLREEKASLKSDIENLNSQYQQRL
        +L QEK++LREEKA+LKSDIE LN+QYQ R+
Subjt:  DLAQEKNDLREEKASLKSDIENLNSQYQQRL

AT4G36060.2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein6.2e-0570.97Show/hide
Query:  DLAQEKNDLREEKASLKSDIENLNSQYQQRL
        +L QEK++LREEKA+LKSDIE LN+QYQ R+
Subjt:  DLAQEKNDLREEKASLKSDIENLNSQYQQRL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCAACGACGCGACGCTCCAATTCCGAATCCAGTCACACCCTCCATTGAGCTTTCAGGGCACCCAAATCGCTCCCAATCCAGTTCCAGGTCTGTTCTAGAA
TCCGCCATTTCAAATTCCTTTTGTTTTTCCGATCTAGCCCAGGAAAAGAATGATCTAAGAGAAGAGAAGGCCTCACTCAAATCTGATATTGAGAATCTCAATTCT
CAATATCAGCAAAGACTCATGGCTACTAACTCTATTGTCATGGCCCCTGCTCCCTTTCCATTTCCAATGCCAATGCCACCAGGGCCATTTCCTCTACATCCAACC
TCGCAGCCTTACATGTTCTTCGGCAATCAAAATCCTGGAGTGATAGCAAACCCATGTTCCCCGTTCGTCCAATACATAGCTCCTAATTCCATGGCTGAGCAGCAG
TCCTCCCGAAATGCACCGCCTTTCGTTCATCCAAGCAACCATGATTCGTCGTTCTCGAACGACACGAACAGGAACGAAAATAATCCATCAGAAGTAGAACTAGAG
GAGAGTTCTTCAAGTGAATGTTCTTTATCTCGTAGTTTAGAGGCTAATTCGTTCAGTAGCACACTTAATGGACGAAAAACTACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATCAACGACGCGACGCTCCAATTCCGAATCCAGTCACACCCTCCATTGAGCTTTCAGGGCACCCAAATCGCTCCCAATCCAGTTCCAGGTCTGTTCTAGAA
TCCGCCATTTCAAATTCCTTTTGTTTTTCCGATCTAGCCCAGGAAAAGAATGATCTAAGAGAAGAGAAGGCCTCACTCAAATCTGATATTGAGAATCTCAATTCT
CAATATCAGCAAAGACTCATGGCTACTAACTCTATTGTCATGGCCCCTGCTCCCTTTCCATTTCCAATGCCAATGCCACCAGGGCCATTTCCTCTACATCCAACC
TCGCAGCCTTACATGTTCTTCGGCAATCAAAATCCTGGAGTGATAGCAAACCCATGTTCCCCGTTCGTCCAATACATAGCTCCTAATTCCATGGCTGAGCAGCAG
TCCTCCCGAAATGCACCGCCTTTCGTTCATCCAAGCAACCATGATTCGTCGTTCTCGAACGACACGAACAGGAACGAAAATAATCCATCAGAAGTAGAACTAGAG
GAGAGTTCTTCAAGTGAATGTTCTTTATCTCGTAGTTTAGAGGCTAATTCGTTCAGTAGCACACTTAATGGACGAAAAACTACTTGATATATGTGGAAACACATA
AAAGTTCAGATTCGCCCCAGATGGTATGATATTGTTCGCTTTGAGTATAAGCTCTCGTGGTTTTACTTTTAGTTTTCCTAAAAGGTCTCGTACCAATAGAGAAGT
ATTTTCTTACTTACTTACAAACTCATGATCAACCCCTTAATTAGCTGATGTCGTTGTTGATGTATGATAGATGATATTTGGTGTCAGAAGGAAATGACTCTGATA
TTATGTAGAGGTGAATGGATACATGCACGATATCACGAGGGATTATGTTCAAAATTTTGGAATCACGGGACGAGAGTTGTCGGTCTCGAGCTTGGTCGAGGGGGT
GAGGCCATTAATGCTGCAGCTATCAAGAAGTTTGAAGGTCTTGAATGAAAGGTGGAAAGGCATTCAAATCAAGAGTGCCCAATACCAGATATATTTCAATTGGTT
CACGGGACATAGAGAGTTGTGGAGCCCTCTATGTATGGCTTGAAATCTTCTTGGTCTTTATCTAGCAGCGTTGTGTAACGAAGATTTAGAGGAGC
Protein sequenceShow/hide protein sequence
MDQRRDAPIPNPVTPSIELSGHPNRSQSSSRSVLESAISNSFCFSDLAQEKNDLREEKASLKSDIENLNSQYQQRLMATNSIVMAPAPFPFPMPMPPGPFPLHPT
SQPYMFFGNQNPGVIANPCSPFVQYIAPNSMAEQQSSRNAPPFVHPSNHDSSFSNDTNRNENNPSEVELEESSSSECSLSRSLEANSFSSTLNGRKTT