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CmoCh02G003280 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G003280
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionTrithorax group protein like
Genome locationCmo_Chr02:1687146..1687427
RNA-Seq ExpressionCmoCh02G003280
SyntenyCmoCh02G003280
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045689.1 hypothetical protein E6C27_scaffold243G002050 [Cucumis melo var. makuwa]6.5e-3683.33Show/hide
Query:  MTYCYGYKPRPSGPLPGPILVLLTVVFILIGLSSLFSSEPIDFSEFQINWPLLAVPIIILVLVRFLSSVDSSSRH--CACDRGWKMHCRCRHG-AW
        MTYCYG KPRPSGPLPGPIL+LL VVFILI LSSLF SEPIDFSEFQINWPLLAVPIIILVLVR LSS+DSS R+  C C+RGWKM+CRC HG AW
Subjt:  MTYCYGYKPRPSGPLPGPILVLLTVVFILIGLSSLFSSEPIDFSEFQINWPLLAVPIIILVLVRFLSSVDSSSRH--CACDRGWKMHCRCRHG-AW

KAG6571042.1 hypothetical protein SDJN03_29957, partial [Cucurbita argyrosperma subsp. sororia]3.4e-3783.16Show/hide
Query:  MTYCYGYKPRPSGPLPGPILVLLTVVFILIGLSSLFSSEPIDFSEFQINWPLLAVPIIILVLVRFLSSVDSSSRH--CACDRGWKMHCRCRHGAW
        MTYCYG KPRPSGPLPGP+L+LL VVFILIGLSSLF SEPIDFSEFQINWPLLAVPII+LVLVR LS+VDSSSR+  C C+RGWKM CRC  GAW
Subjt:  MTYCYGYKPRPSGPLPGPILVLLTVVFILIGLSSLFSSEPIDFSEFQINWPLLAVPIIILVLVRFLSSVDSSSRH--CACDRGWKMHCRCRHGAW

KAG6605007.1 hypothetical protein SDJN03_02324, partial [Cucurbita argyrosperma subsp. sororia]8.1e-4798.92Show/hide
Query:  MTYCYGYKPRPSGPLPGPILVLLTVVFILIGLSSLFSSEPIDFSEFQINWPLLAVPIIILVLVRFLSSVDSSSRHCACDRGWKMHCRCRHGAW
        MTYCYGYKP PSGPLPGPILVLLTVVFILIGLSSLFSSEPIDFSEFQINWPLLAVPIIILVLVRFLSSVDSSSRHCACDRGWKMHCRCRHGAW
Subjt:  MTYCYGYKPRPSGPLPGPILVLLTVVFILIGLSSLFSSEPIDFSEFQINWPLLAVPIIILVLVRFLSSVDSSSRHCACDRGWKMHCRCRHGAW

KGN61893.1 hypothetical protein Csa_006600 [Cucumis sativus]4.9e-3683.33Show/hide
Query:  MTYCYGYKPRPSGPLPGPILVLLTVVFILIGLSSLFSSEPIDFSEFQINWPLLAVPIIILVLVRFLSSVDSSSRH--CACDRGWKMHCRCRHG-AW
        MTYCYG KPRPSGPLPGPIL+LL VVFILI LSSLF SEPIDFSEFQINWPLLAVPIIILVLVR L+S+DSS R+  C CDRGWKMHCRC  G AW
Subjt:  MTYCYGYKPRPSGPLPGPILVLLTVVFILIGLSSLFSSEPIDFSEFQINWPLLAVPIIILVLVRFLSSVDSSSRH--CACDRGWKMHCRCRHG-AW

PKI78722.1 hypothetical protein CRG98_000947 [Punica granatum]1.0e-0944.33Show/hide
Query:  MTYCYGYK---PRPS-GPLPGPILVLLTVVFILIGLSSLFSSEPI-DFSEFQINWPLLAVPIIILVLVRFLSSVDSSSRH---CACDRGWKMHCRCR
        M YCY YK   P PS GP+P  +L+ L +  I I LS L + + + +  E  INW LLAVPI+IL +V +LSS+D   +      C R WK  C CR
Subjt:  MTYCYGYK---PRPS-GPLPGPILVLLTVVFILIGLSSLFSSEPI-DFSEFQINWPLLAVPIIILVLVRFLSSVDSSSRH---CACDRGWKMHCRCR

TrEMBL top hitse value%identityAlignment
A0A0A0LJB6 Uncharacterized protein2.4e-3683.33Show/hide
Query:  MTYCYGYKPRPSGPLPGPILVLLTVVFILIGLSSLFSSEPIDFSEFQINWPLLAVPIIILVLVRFLSSVDSSSRH--CACDRGWKMHCRCRHG-AW
        MTYCYG KPRPSGPLPGPIL+LL VVFILI LSSLF SEPIDFSEFQINWPLLAVPIIILVLVR L+S+DSS R+  C CDRGWKMHCRC  G AW
Subjt:  MTYCYGYKPRPSGPLPGPILVLLTVVFILIGLSSLFSSEPIDFSEFQINWPLLAVPIIILVLVRFLSSVDSSSRH--CACDRGWKMHCRCRHG-AW

A0A2I0J9K8 uncharacterized protein LOC1161943238.9e-0735.42Show/hide
Query:  MTYCYGYKPRPS----------GPLPGPILVLLTVVFILIGLSSLFSSE-PIDFSEFQINWPLLAVPIIILVLVRFLSSVDSSSRHCACDRGWKMH
        M Y Y  +  P+           PLP P+LV+L V F+ +G S  FS E  ++ +E ++ W LLA P+++L+LV++LSS++S       DR  + H
Subjt:  MTYCYGYKPRPS----------GPLPGPILVLLTVVFILIGLSSLFSSE-PIDFSEFQINWPLLAVPIIILVLVRFLSSVDSSSRHCACDRGWKMH

A0A2I0LDH6 Uncharacterized protein5.0e-1044.33Show/hide
Query:  MTYCYGYK---PRPS-GPLPGPILVLLTVVFILIGLSSLFSSEPI-DFSEFQINWPLLAVPIIILVLVRFLSSVDSSSRH---CACDRGWKMHCRCR
        M YCY YK   P PS GP+P  +L+ L +  I I LS L + + + +  E  INW LLAVPI+IL +V +LSS+D   +      C R WK  C CR
Subjt:  MTYCYGYK---PRPS-GPLPGPILVLLTVVFILIGLSSLFSSEPI-DFSEFQINWPLLAVPIIILVLVRFLSSVDSSSRH---CACDRGWKMHCRCR

A0A5D3BJW1 Uncharacterized protein3.1e-3683.33Show/hide
Query:  MTYCYGYKPRPSGPLPGPILVLLTVVFILIGLSSLFSSEPIDFSEFQINWPLLAVPIIILVLVRFLSSVDSSSRH--CACDRGWKMHCRCRHG-AW
        MTYCYG KPRPSGPLPGPIL+LL VVFILI LSSLF SEPIDFSEFQINWPLLAVPIIILVLVR LSS+DSS R+  C C+RGWKM+CRC HG AW
Subjt:  MTYCYGYKPRPSGPLPGPILVLLTVVFILIGLSSLFSSEPIDFSEFQINWPLLAVPIIILVLVRFLSSVDSSSRH--CACDRGWKMHCRCRHG-AW

A0A6J1JLC4 uncharacterized protein LOC1114862532.0e-0653.33Show/hide
Query:  PLPGPILVLLTVVFILIGLSSLFSSE-PIDFSEFQINWPLLAVPIIILVLVRFLSSVDSS
        PLP P+L+LL VVFI +G S   S E  ++ +E QINW L A P+++++L RFLSSVD S
Subjt:  PLPGPILVLLTVVFILIGLSSLFSSE-PIDFSEFQINWPLLAVPIIILVLVRFLSSVDSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G21180.1 unknown protein1.7e-0542.37Show/hide
Query:  PLPGPILVLLTVVFILIGLSSLFS-SEPIDFSEFQINWPLLAVPIIILVLVRFLSSVDS
        PLP P+L++L V  + +  S  FS  E  + +E QIN+ LL +P+ ++VLVR+LSS+++
Subjt:  PLPGPILVLLTVVFILIGLSSLFS-SEPIDFSEFQINWPLLAVPIIILVLVRFLSSVDS

AT2G21185.1 unknown protein1.7e-0538.16Show/hide
Query:  PGPILVLLTVVFILIGLSSLFSSE-PIDFSEFQINWPLL-AVPIIILVLVRFLSSVDSSSR---HCACDRGWKMHC
        P P++V++TV  +L+ LSS+   E  +   E  ++W LL AVP+ +L  VR LS +++S R   +C C R W+  C
Subjt:  PGPILVLLTVVFILIGLSSLFSSE-PIDFSEFQINWPLL-AVPIIILVLVRFLSSVDSSSR---HCACDRGWKMHC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTACTGTTATGGTTATAAGCCTCGCCCTTCCGGTCCACTCCCCGGCCCTATCCTGGTGCTTCTCACCGTAGTCTTCATCTTGATCGGATTGTCCTCCTTGTTCTC
CTCTGAACCTATCGACTTCTCCGAGTTTCAAATCAATTGGCCTCTTCTCGCTGTTCCGATCATTATACTCGTTCTCGTTCGCTTTTTGTCGTCCGTGGATTCTTCATCCA
GGCACTGCGCTTGCGATCGCGGCTGGAAGATGCATTGTCGGTGCCGCCATGGCGCGTGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTTACTGTTATGGTTATAAGCCTCGCCCTTCCGGTCCACTCCCCGGCCCTATCCTGGTGCTTCTCACCGTAGTCTTCATCTTGATCGGATTGTCCTCCTTGTTCTC
CTCTGAACCTATCGACTTCTCCGAGTTTCAAATCAATTGGCCTCTTCTCGCTGTTCCGATCATTATACTCGTTCTCGTTCGCTTTTTGTCGTCCGTGGATTCTTCATCCA
GGCACTGCGCTTGCGATCGCGGCTGGAAGATGCATTGTCGGTGCCGCCATGGCGCGTGGTAA
Protein sequenceShow/hide protein sequence
MTYCYGYKPRPSGPLPGPILVLLTVVFILIGLSSLFSSEPIDFSEFQINWPLLAVPIIILVLVRFLSSVDSSSRHCACDRGWKMHCRCRHGAW