; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh02G003350 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G003350
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionauxin-responsive protein SAUR21-like
Genome locationCmo_Chr02:1727300..1727593
RNA-Seq ExpressionCmoCh02G003350
SyntenyCmoCh02G003350
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605013.1 Auxin-responsive protein SAUR20, partial [Cucurbita argyrosperma subsp. sororia]2.9e-4798.97Show/hide
Query:  MGIRLPSVLLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQALLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRLHRS
        MGIRLPSVLLNAKQILKVQAMSAKNHSDVPKG+IAVYVGEIQRKRFVVPISYLKHPSFQALLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRLHRS
Subjt:  MGIRLPSVLLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQALLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRLHRS

XP_022947569.1 auxin-responsive protein SAUR21-like isoform X1 [Cucurbita moschata]5.9e-48100Show/hide
Query:  MGIRLPSVLLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQALLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRLHRS
        MGIRLPSVLLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQALLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRLHRS
Subjt:  MGIRLPSVLLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQALLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRLHRS

XP_022947570.1 auxin-responsive protein SAUR21-like isoform X2 [Cucurbita moschata]5.9e-48100Show/hide
Query:  MGIRLPSVLLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQALLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRLHRS
        MGIRLPSVLLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQALLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRLHRS
Subjt:  MGIRLPSVLLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQALLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRLHRS

XP_023007088.1 auxin-responsive protein SAUR21-like [Cucurbita maxima]3.8e-4797.94Show/hide
Query:  MGIRLPSVLLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQALLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRLHRS
        MGIRLPSVLLNAKQILK+QAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQ LLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRLHRS
Subjt:  MGIRLPSVLLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQALLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRLHRS

XP_023533290.1 auxin-responsive protein SAUR21-like [Cucurbita pepo subsp. pepo]3.8e-4798.97Show/hide
Query:  MGIRLPSVLLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQALLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRLHRS
        MGIRLPSVLLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLK+PSFQALLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRLHRS
Subjt:  MGIRLPSVLLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQALLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRLHRS

TrEMBL top hitse value%identityAlignment
A0A6J1CYI0 auxin-responsive protein SAUR21-like1.6e-4390.72Show/hide
Query:  MGIRLPSVLLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQALLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRLHRS
        MGIRLPS+LLNAKQILK+QAMSA+N SDVPKG+IAVYVGEIQRKRFVVPISYLKHPSF  LLNRSEEEFGFCHPMGGLTIPCREDAF+NLTSRLH S
Subjt:  MGIRLPSVLLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQALLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRLHRS

A0A6J1G767 auxin-responsive protein SAUR21-like isoform X12.8e-48100Show/hide
Query:  MGIRLPSVLLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQALLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRLHRS
        MGIRLPSVLLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQALLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRLHRS
Subjt:  MGIRLPSVLLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQALLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRLHRS

A0A6J1G7A0 auxin-responsive protein SAUR21-like isoform X22.8e-48100Show/hide
Query:  MGIRLPSVLLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQALLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRLHRS
        MGIRLPSVLLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQALLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRLHRS
Subjt:  MGIRLPSVLLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQALLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRLHRS

A0A6J1JC36 auxin-responsive protein SAUR21-like2.8e-4389.69Show/hide
Query:  MGIRLPSVLLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQALLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRLHRS
        MGIRLPS+L NAKQILK+QA+SA+N SDVPKGHIAVYVGEIQRKRFVVPISYLKHPSF  LLNRSEEEFGFCHPMGGLTIPCREDAF+NLT RLHRS
Subjt:  MGIRLPSVLLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQALLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRLHRS

A0A6J1L6R5 auxin-responsive protein SAUR21-like1.8e-4797.94Show/hide
Query:  MGIRLPSVLLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQALLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRLHRS
        MGIRLPSVLLNAKQILK+QAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQ LLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRLHRS
Subjt:  MGIRLPSVLLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQALLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRLHRS

SwissProt top hitse value%identityAlignment
Q9FJF6 Auxin-responsive protein SAUR232.9e-2667.82Show/hide
Query:  LLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQALLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRLH
        LL AK+IL   + SA   S  PKG +AVYVGE Q+KR++VP+SYL  PSFQALL++SEEEFGF HPMGGLTIPC ED F+N+TSRLH
Subjt:  LLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQALLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRLH

Q9FJF9 Auxin-responsive protein SAUR211.5e-2566.28Show/hide
Query:  LLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQALLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRL
        LL AK+IL     SA      PKG +AVYVGE Q+KR++VP+SYL  PSFQALL++SEEEFGF HPMGGLTIPC ED F+N+TSRL
Subjt:  LLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQALLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRL

Q9FJG0 Auxin-responsive protein SAUR203.9e-2665.91Show/hide
Query:  LLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQALLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRLHR
        LL AK+IL     +A   S  PKG +AVYVGE Q+KR++VPISYL  PSFQALL++SEEEFGF HPMGGLTIPC ED F+N+TSR  R
Subjt:  LLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQALLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRLHR

Q9FJG1 Auxin-responsive protein SAUR196.6e-2666.28Show/hide
Query:  LLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQALLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRL
        LL AK+IL   + S    S  PKG +AVYVGE Q+KR++VP+SYL  PSFQALL++SEEEFGF HPMGGLTIPC ED F+N+TSRL
Subjt:  LLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQALLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRL

Q9FK62 Auxin-responsive protein SAUR241.5e-2566.28Show/hide
Query:  LLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQALLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRL
        LL AK+IL   + S    S  PKG +AVYVGE Q+KR++VP+SYL  PSFQALL++SEEEFGF HPMGGLTIPC ED F+N+TSRL
Subjt:  LLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQALLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRL

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family1.2e-2759.18Show/hide
Query:  MGIRLPSVLLNAKQILKVQAMSAKNHSDVPKGHIAVYVGE-IQRKRFVVPISYLKHPSFQALLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRLHRS
        M IR+  VL ++KQ+LK  + S+ N + +PKGH+AVYVGE +Q++RFVVP++YL HP FQ LL ++EEEFGF HPMGGLTIPC E  F++L SRL  S
Subjt:  MGIRLPSVLLNAKQILKVQAMSAKNHSDVPKGHIAVYVGE-IQRKRFVVPISYLKHPSFQALLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRLHRS

AT4G38840.1 SAUR-like auxin-responsive protein family5.5e-2858.59Show/hide
Query:  MGIRLPSVLLNAKQILK----VQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQALLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRLH
        M IR+P VL ++KQIL+    + + S+ +  DVPKG++AVYVGE   KRFVVP+SYL  PSFQ LL ++EEEFGF HPMGGLTIPC E+ F++L SR +
Subjt:  MGIRLPSVLLNAKQILK----VQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQALLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRLH

AT5G18010.1 SAUR-like auxin-responsive protein family4.7e-2766.28Show/hide
Query:  LLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQALLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRL
        LL AK+IL   + S    S  PKG +AVYVGE Q+KR++VP+SYL  PSFQALL++SEEEFGF HPMGGLTIPC ED F+N+TSRL
Subjt:  LLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQALLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRL

AT5G18020.1 SAUR-like auxin-responsive protein family2.7e-2765.91Show/hide
Query:  LLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQALLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRLHR
        LL AK+IL     +A   S  PKG +AVYVGE Q+KR++VPISYL  PSFQALL++SEEEFGF HPMGGLTIPC ED F+N+TSR  R
Subjt:  LLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQALLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRLHR

AT5G18060.1 SAUR-like auxin-responsive protein family2.1e-2767.82Show/hide
Query:  LLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQALLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRLH
        LL AK+IL   + SA   S  PKG +AVYVGE Q+KR++VP+SYL  PSFQALL++SEEEFGF HPMGGLTIPC ED F+N+TSRLH
Subjt:  LLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQALLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRLH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATCCGTTTGCCATCAGTACTTCTCAATGCCAAGCAGATTCTGAAAGTTCAAGCTATGTCTGCCAAAAATCATTCTGACGTTCCCAAAGGCCACATTGCAGTCTA
CGTGGGAGAGATCCAGAGAAAGAGATTCGTAGTTCCTATATCATACTTGAAGCATCCTTCTTTCCAAGCTCTGCTAAATAGATCAGAAGAAGAGTTTGGATTTTGCCATC
CGATGGGCGGCTTGACGATTCCGTGCAGAGAAGATGCCTTCGTAAATCTCACTTCTAGGCTACACAGATCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAATCCGTTTGCCATCAGTACTTCTCAATGCCAAGCAGATTCTGAAAGTTCAAGCTATGTCTGCCAAAAATCATTCTGACGTTCCCAAAGGCCACATTGCAGTCTA
CGTGGGAGAGATCCAGAGAAAGAGATTCGTAGTTCCTATATCATACTTGAAGCATCCTTCTTTCCAAGCTCTGCTAAATAGATCAGAAGAAGAGTTTGGATTTTGCCATC
CGATGGGCGGCTTGACGATTCCGTGCAGAGAAGATGCCTTCGTAAATCTCACTTCTAGGCTACACAGATCATGA
Protein sequenceShow/hide protein sequence
MGIRLPSVLLNAKQILKVQAMSAKNHSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFQALLNRSEEEFGFCHPMGGLTIPCREDAFVNLTSRLHRS