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CmoCh02G003370 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G003370
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionauxin-responsive protein SAUR21-like
Genome locationCmo_Chr02:1729727..1733175
RNA-Seq ExpressionCmoCh02G003370
SyntenyCmoCh02G003370
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571049.1 Auxin-responsive protein SAUR20, partial [Cucurbita argyrosperma subsp. sororia]8.5e-1493.33Show/hide
Query:  MGIRLPSLLLNAKQIVRMQTVSSRSQCGVPKGHIAVYVGETERKR
        MGIRLPSLLLNAKQIV+MQTVSSR+QCGVPKGHIAVYVG+TERKR
Subjt:  MGIRLPSLLLNAKQIVRMQTVSSRSQCGVPKGHIAVYVGETERKR
KAG6605014.1 Auxin-responsive protein SAUR23, partial [Cucurbita argyrosperma subsp. sororia]7.7e-15100Show/hide
Query:  MGIRLPSLLLNAKQIVRMQTVSSRSQCGVPKGHIAVYVGETERKR
        MGIRLPSLLLNAKQIVRMQTVSSRSQCGVPKGHIAVYVGETERKR
Subjt:  MGIRLPSLLLNAKQIVRMQTVSSRSQCGVPKGHIAVYVGETERKR
XP_022944352.1 auxin-responsive protein SAUR21-like [Cucurbita moschata]8.5e-1493.33Show/hide
Query:  MGIRLPSLLLNAKQIVRMQTVSSRSQCGVPKGHIAVYVGETERKR
        MGIRLPSLLLNAKQIV+MQTVSSR+QCGVPKGHIAVYVG+TERKR
Subjt:  MGIRLPSLLLNAKQIVRMQTVSSRSQCGVPKGHIAVYVGETERKR
XP_023007087.1 auxin-responsive protein SAUR21-like [Cucurbita maxima]5.0e-1495.56Show/hide
Query:  MGIRLPSLLLNAKQIVRMQTVSSRSQCGVPKGHIAVYVGETERKR
        MGIRLPSLLLNAKQ+VRMQTVSSRSQCGVPKGHIAVYVGE ERKR
Subjt:  MGIRLPSLLLNAKQIVRMQTVSSRSQCGVPKGHIAVYVGETERKR
XP_023533283.1 auxin-responsive protein SAUR21-like [Cucurbita pepo subsp. pepo]3.8e-1497.78Show/hide
Query:  MGIRLPSLLLNAKQIVRMQTVSSRSQCGVPKGHIAVYVGETERKR
        MGIRLPSLLLNAKQIVRMQTVSSRSQCGVPKGHIAVYVGE ERKR
Subjt:  MGIRLPSLLLNAKQIVRMQTVSSRSQCGVPKGHIAVYVGETERKR
TrEMBL top hitse value%identityAlignment
A0A6J1CWI4 auxin-responsive protein SAUR21-like1.2e-1393.33Show/hide
Query:  MGIRLPSLLLNAKQIVRMQTVSSRSQCGVPKGHIAVYVGETERKR
        MGIRLPSLLLNAKQIVRMQT SSR+QCGVPKGHIAVYVGE ERKR
Subjt:  MGIRLPSLLLNAKQIVRMQTVSSRSQCGVPKGHIAVYVGETERKR
A0A6J1FVH4 auxin-responsive protein SAUR21-like4.1e-1493.33Show/hide
Query:  MGIRLPSLLLNAKQIVRMQTVSSRSQCGVPKGHIAVYVGETERKR
        MGIRLPSLLLNAKQIV+MQTVSSR+QCGVPKGHIAVYVG+TERKR
Subjt:  MGIRLPSLLLNAKQIVRMQTVSSRSQCGVPKGHIAVYVGETERKR
A0A6J1FVI6 auxin-responsive protein SAUR21-like2.0e-1391.11Show/hide
Query:  MGIRLPSLLLNAKQIVRMQTVSSRSQCGVPKGHIAVYVGETERKR
        MGIRLPSLLLNAKQIV+MQTVSSR+QCGVPKGHIAVYVG+ ERKR
Subjt:  MGIRLPSLLLNAKQIVRMQTVSSRSQCGVPKGHIAVYVGETERKR
A0A6J1JGW3 auxin-responsive protein SAUR21-like1.0e-1286.67Show/hide
Query:  MGIRLPSLLLNAKQIVRMQTVSSRSQCGVPKGHIAVYVGETERKR
        MGIRLPSLLLNAKQ+V+MQTV SR+QCGVPKGHIAVYVG+ ERKR
Subjt:  MGIRLPSLLLNAKQIVRMQTVSSRSQCGVPKGHIAVYVGETERKR
A0A6J1KXM0 auxin-responsive protein SAUR21-like2.4e-1495.56Show/hide
Query:  MGIRLPSLLLNAKQIVRMQTVSSRSQCGVPKGHIAVYVGETERKR
        MGIRLPSLLLNAKQ+VRMQTVSSRSQCGVPKGHIAVYVGE ERKR
Subjt:  MGIRLPSLLLNAKQIVRMQTVSSRSQCGVPKGHIAVYVGETERKR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family1.7e-0441.38Show/hide
Query:  MGIRLPSLLLNAKQIVRMQTVSSRSQCGVPKGHIAVYVGETERKRK--MGKLRLSDPC
        M IR+  +L ++KQ+++  + SS +   +PKGH+AVYVGE  +KR+  +    LS PC
Subjt:  MGIRLPSLLLNAKQIVRMQTVSSRSQCGVPKGHIAVYVGETERKRK--MGKLRLSDPC
AT4G38840.1 SAUR-like auxin-responsive protein family4.5e-0548.98Show/hide
Query:  MGIRLPSLLLNAKQIVR----MQTVSSRSQCGVPKGHIAVYVGETERKR
        M IR+P +L ++KQI+R    + + SS S   VPKG++AVYVGE   KR
Subjt:  MGIRLPSLLLNAKQIVR----MQTVSSRSQCGVPKGHIAVYVGETERKR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATCAGACTACCTTCACTTCTCCTTAATGCTAAGCAAATTGTAAGAATGCAGACGGTTTCTTCAAGAAGCCAATGTGGTGTTCCAAAGGGTCATATTGCAGTCTA
TGTGGGGGAGACCGAAAGGAAGCGGAAGATGGGCAAATTGAGGCTTTCTGATCCGTGCTTGATCTTACAATCACCAACTCGAAATAGGCTACCAAAGAGCAAATGTCGGC
ATATCTTCATCATCCGGTGGGCACTAGGATGTGAAGCTGGAAACAAAGATTCTTCCTTTGTTGACTGCTCTGGCTCGGTTACCATCACAAATAAAGCAACAAAGAAAAGG
CTATATAGAAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAATCAGACTACCTTCACTTCTCCTTAATGCTAAGCAAATTGTAAGAATGCAGACGGTTTCTTCAAGAAGCCAATGTGGTGTTCCAAAGGGTCATATTGCAGTCTA
TGTGGGGGAGACCGAAAGGAAGCGGAAGATGGGCAAATTGAGGCTTTCTGATCCGTGCTTGATCTTACAATCACCAACTCGAAATAGGCTACCAAAGAGCAAATGTCGGC
ATATCTTCATCATCCGGTGGGCACTAGGATGTGAAGCTGGAAACAAAGATTCTTCCTTTGTTGACTGCTCTGGCTCGGTTACCATCACAAATAAAGCAACAAAGAAAAGG
CTATATAGAAATTGA
Protein sequenceShow/hide protein sequence
MGIRLPSLLLNAKQIVRMQTVSSRSQCGVPKGHIAVYVGETERKRKMGKLRLSDPCLILQSPTRNRLPKSKCRHIFIIRWALGCEAGNKDSSFVDCSGSVTITNKATKKR
LYRN