; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh02G003380 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G003380
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionauxin-responsive protein SAUR24-like
Genome locationCmo_Chr02:1733363..1733656
RNA-Seq ExpressionCmoCh02G003380
SyntenyCmoCh02G003380
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022947574.1 auxin-responsive protein SAUR21-like [Cucurbita moschata]7.7e-48100Show/hide
Query:  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS
        MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS
Subjt:  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS

XP_022947577.1 auxin-responsive protein SAUR21-like [Cucurbita moschata]2.2e-4798.97Show/hide
Query:  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS
        MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLL HAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS
Subjt:  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS

XP_023007089.1 auxin-responsive protein SAUR21-like [Cucurbita maxima]4.2e-4695.88Show/hide
Query:  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS
        MGIRLLSLVP+AKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLL HAEEEFGFHHPQGGLTIPC+EDAF+DLTSRLQVS
Subjt:  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS

XP_023533293.1 auxin-responsive protein SAUR21-like [Cucurbita pepo subsp. pepo]1.4e-4696.91Show/hide
Query:  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS
        MGIRLLSLVPHAKQILK QSSFTKNQLDVPKGHVAVYVGEIQRKRFV+PISYLNHPSFQKLL HAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS
Subjt:  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS

XP_023533295.1 auxin-responsive protein SAUR21-like [Cucurbita pepo subsp. pepo]8.5e-4797.94Show/hide
Query:  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS
        MG RLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLL HAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS
Subjt:  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS

TrEMBL top hitse value%identityAlignment
A0A6J1CWI9 auxin-responsive protein SAUR21-like2.7e-4694.85Show/hide
Query:  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS
        MGIRLLSLVPHAKQILKMQSSFTKNQ+DVPK HVAVYVGEIQRKRFVVPISYLNHPSFQ+LLSHAEEEFGFHHPQGGLTIPC+EDAF+DLTSRLQVS
Subjt:  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS

A0A6J1G6T7 auxin-responsive protein SAUR24-like2.7e-4694.85Show/hide
Query:  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS
        MGIRLLSLVPHAKQILKMQS FTK+QLDVPKGHVAVYVGEIQRKRF+VPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPC+EDAF+DLTSRLQVS
Subjt:  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS

A0A6J1G6U7 auxin-responsive protein SAUR21-like1.1e-4798.97Show/hide
Query:  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS
        MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLL HAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS
Subjt:  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS

A0A6J1G772 auxin-responsive protein SAUR21-like3.7e-48100Show/hide
Query:  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS
        MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS
Subjt:  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS

A0A6J1L403 auxin-responsive protein SAUR21-like2.0e-4695.88Show/hide
Query:  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS
        MGIRLLSLVP+AKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLL HAEEEFGFHHPQGGLTIPC+EDAF+DLTSRLQVS
Subjt:  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS

SwissProt top hitse value%identityAlignment
Q9FJF7 Auxin-responsive protein SAUR223.1e-2363.29Show/hide
Query:  KMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQ
        K+ S  T      PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +E+EFGF HP GGLTIPC ED F+++TSRLQ
Subjt:  KMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQ

Q9FJF9 Auxin-responsive protein SAUR218.9e-2360.71Show/hide
Query:  AKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQ
        AK+IL   ++        PKG +AVYVGE Q+KR++VP+SYL+ PSFQ LLS +EEEFGF HP GGLTIPC ED F+++TSRLQ
Subjt:  AKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQ

Q9FJG0 Auxin-responsive protein SAUR203.1e-2364.56Show/hide
Query:  KMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQ
        K+ S  T      PKG +AVYVGE Q+KR++VPISYLN PSFQ LLS +EEEFGF HP GGLTIPC ED F+++TSR Q
Subjt:  KMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQ

Q9FJG1 Auxin-responsive protein SAUR191.2e-2263.29Show/hide
Query:  KMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQ
        K+ S  T      PKG +AVYVGE Q+KR++VP+SYL+ PSFQ LLS +EEEFGF HP GGLTIPC ED F+++TSRLQ
Subjt:  KMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQ

Q9FK62 Auxin-responsive protein SAUR242.3e-2372.73Show/hide
Query:  PKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQ
        PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +EEEFGF HP GGLTIPC ED F+++TSRLQ
Subjt:  PKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQ

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family5.5e-2859.18Show/hide
Query:  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGE-IQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS
        M IR+  ++  +KQ+LK   S + N + +PKGH+AVYVGE +Q++RFVVP++YL+HP FQKLL  AEEEFGF HP GGLTIPC E  F+DL SRL  S
Subjt:  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGE-IQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS

AT4G34790.1 SAUR-like auxin-responsive protein family2.0e-2555.56Show/hide
Query:  MGIRLLSLVPHAKQILKMQSSFTKNQLD-----------VPKGHVAVYVGE-IQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCREDAFV
        MG+ + S++P+AKQI K QS   KN              VPKGHVAVYVGE +++KRFVVPISYLNHP F++ L+ AEEE GFHH  GGLTIPCRE++F+
Subjt:  MGIRLLSLVPHAKQILKMQSSFTKNQLD-----------VPKGHVAVYVGE-IQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCREDAFV

Query:  DLTSRLQV
         L +  Q+
Subjt:  DLTSRLQV

AT4G34800.1 SAUR-like auxin-responsive protein family4.4e-2568.48Show/hide
Query:  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGE--IQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCREDAFVDL
        M IR LS V ++KQ  K QS        VPKGHVAVYVGE    +KRFVVPISYLNHPSFQ LLS AEEEFGF+HP GGLTIPCRE+ FV L
Subjt:  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGE--IQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCREDAFVDL

AT4G34810.1 SAUR-like auxin-responsive protein family1.2e-2759.05Show/hide
Query:  MGIRLLSLVPHAKQILKMQSSFTKNQLD------VPKGHVAVYVG---EIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCREDAFVDL-
        MG+   ++    KQILK+ S   +N+        VPKGHVAVYVG   E+++KRFVVPIS+LNHPSF++ LS AEEEFGF+HP GGLTIPCRE+ F+DL 
Subjt:  MGIRLLSLVPHAKQILKMQSSFTKNQLD------VPKGHVAVYVG---EIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCREDAFVDL-

Query:  TSRLQ
         SRLQ
Subjt:  TSRLQ

AT4G38840.1 SAUR-like auxin-responsive protein family3.6e-2759.79Show/hide
Query:  MGIRLLSLVPHAKQILK----MQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSR
        M IR+  ++  +KQIL+    + SS + + LDVPKG++AVYVGE   KRFVVP+SYL+ PSFQ LL  AEEEFGF HP GGLTIPC E+ F+DL SR
Subjt:  MGIRLLSLVPHAKQILK----MQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGATTCGGTTGCTATCTTTGGTTCCTCATGCCAAGCAAATTCTAAAGATGCAGTCAAGTTTTACCAAAAACCAGTTGGACGTTCCAAAAGGTCATGTGGCTGTTTA
TGTAGGAGAGATCCAACGGAAGCGGTTCGTGGTTCCGATATCTTACCTAAACCATCCATCGTTCCAGAAACTGCTCAGCCACGCCGAGGAGGAGTTTGGCTTCCATCATC
CACAAGGGGGCCTAACAATTCCTTGCAGAGAAGATGCCTTCGTTGATCTCACTTCTAGATTGCAAGTTTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGATTCGGTTGCTATCTTTGGTTCCTCATGCCAAGCAAATTCTAAAGATGCAGTCAAGTTTTACCAAAAACCAGTTGGACGTTCCAAAAGGTCATGTGGCTGTTTA
TGTAGGAGAGATCCAACGGAAGCGGTTCGTGGTTCCGATATCTTACCTAAACCATCCATCGTTCCAGAAACTGCTCAGCCACGCCGAGGAGGAGTTTGGCTTCCATCATC
CACAAGGGGGCCTAACAATTCCTTGCAGAGAAGATGCCTTCGTTGATCTCACTTCTAGATTGCAAGTTTCTTGA
Protein sequenceShow/hide protein sequence
MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS