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CmoCh02G003410 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G003410
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionauxin-responsive protein SAUR21-like
Genome locationCmo_Chr02:1739122..1739415
RNA-Seq ExpressionCmoCh02G003410
SyntenyCmoCh02G003410
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605018.1 Auxin-responsive protein SAUR21, partial [Cucurbita argyrosperma subsp. sororia]3.4e-48100Show/hide
Query:  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLSSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQSC
        MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLSSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQSC
Subjt:  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLSSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQSC

KAG6605022.1 Auxin-responsive protein SAUR22, partial [Cucurbita argyrosperma subsp. sororia]1.4e-4695.88Show/hide
Query:  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLSSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQSC
        MGIRLPSLLLNAK+AVKMHTASS NRCGVPKGHIAVYVGD+ERKRFVVPIAYLNHPSFSALL+SAEEEFGFKHPTGGLTIPCREDVFINLTSRLQSC
Subjt:  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLSSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQSC

KAG6605027.1 Auxin-responsive protein SAUR21, partial [Cucurbita argyrosperma subsp. sororia]2.7e-4596.88Show/hide
Query:  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLSSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQS
        MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALL+ AEEEF FKHPTGGLTIPCREDVFINLTSRLQS
Subjt:  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLSSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQS

XP_023533163.1 auxin-responsive protein SAUR21-like [Cucurbita pepo subsp. pepo]2.9e-4797.94Show/hide
Query:  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLSSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQSC
        MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALL+ AEEEFGFKHPTGGLTIPCREDVFINLTSRLQSC
Subjt:  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLSSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQSC

XP_023533287.1 auxin-responsive protein SAUR21-like [Cucurbita pepo subsp. pepo]6.5e-4796.91Show/hide
Query:  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLSSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQSC
        MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGD+ERKRFVVPIAYLNHPSFSALL+ AEEEFGFKHPTGGLTIPCREDVFINLTSRLQSC
Subjt:  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLSSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQSC

TrEMBL top hitse value%identityAlignment
A0A0A0LM71 Uncharacterized protein5.6e-4492.63Show/hide
Query:  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLSSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ
        MGIRLPSLLLNAKQ  KMHT SSRN+CGVPKGHIAVYVGDIERKRFVVP++YLNHPSFSALL SAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ
Subjt:  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLSSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ

A0A1S3C787 auxin-responsive protein SAUR21-like1.6e-4391.58Show/hide
Query:  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLSSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ
        MGIRLPSLL NAKQ  KMHT SSRN+CGVPKGHIAVYVGDIERKRFVVP++YLNHPSFSALL SAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ
Subjt:  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLSSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ

A0A5D3BMR1 Auxin-responsive protein SAUR21-like1.6e-4391.58Show/hide
Query:  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLSSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ
        MGIRLPSLL NAKQ  KMHT SSRN+CGVPKGHIAVYVGDIERKRFVVP++YLNHPSFSALL SAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ
Subjt:  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLSSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ

A0A6J1FVH4 auxin-responsive protein SAUR21-like6.1e-4390.62Show/hide
Query:  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLSSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQS
        MGIRLPSLLLNAKQ VKM T SSRN+CGVPKGHIAVYVGD ERKRFVVPI+YLNHPSFSALL +AEEEFGFKHPTGGLTIPCREDVFINLTSRLQ+
Subjt:  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLSSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQS

A0A6J1JGW3 auxin-responsive protein SAUR21-like4.7e-4390.62Show/hide
Query:  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLSSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQS
        MGIRLPSLLLNAKQ VKM T  SRN+CGVPKGHIAVYVGDIERKRFVVPI+YLNHPSFSALL +AEEEFGFKHPTGGLTIPCREDVFINLTSRLQ+
Subjt:  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLSSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQS

SwissProt top hitse value%identityAlignment
Q9FJF7 Auxin-responsive protein SAUR223.6e-2459.77Show/hide
Query:  LLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLSSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ
        LL AK+ +   TA+       PKG +AVYVG+ ++KR++VP++YLN PSF ALLS +E+EFGF HP GGLTIPC ED FIN+TSRLQ
Subjt:  LLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLSSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ

Q9FJF9 Auxin-responsive protein SAUR212.8e-2460.92Show/hide
Query:  LLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLSSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ
        LL AK+ +   TAS+      PKG +AVYVG+ ++KR++VP++YL+ PSF ALLS +EEEFGF HP GGLTIPC ED FIN+TSRLQ
Subjt:  LLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLSSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ

Q9FJG0 Auxin-responsive protein SAUR206.2e-2459.77Show/hide
Query:  LLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLSSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ
        LL AK+ +   T ++      PKG +AVYVG+ ++KR++VPI+YLN PSF ALLS +EEEFGF HP GGLTIPC ED FIN+TSR Q
Subjt:  LLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLSSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ

Q9FJG1 Auxin-responsive protein SAUR196.2e-2459.77Show/hide
Query:  LLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLSSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ
        LL AK+ +   TA+       PKG +AVYVG+ ++KR++VP++YL+ PSF ALLS +EEEFGF HP GGLTIPC ED FIN+TSRLQ
Subjt:  LLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLSSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ

Q9FK62 Auxin-responsive protein SAUR243.6e-2459.77Show/hide
Query:  LLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLSSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ
        LL AK+ +   T +       PKG +AVYVG+ ++KR++VP++YLN PSF ALLS +EEEFGF HP GGLTIPC ED FIN+TSRLQ
Subjt:  LLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLSSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family5.2e-2655.67Show/hide
Query:  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGD-IERKRFVVPIAYLNHPSFSALLSSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQS
        M IR+  +L ++KQ +K  + SS N   +PKGH+AVYVG+ ++++RFVVP+ YL+HP F  LL  AEEEFGF HP GGLTIPC E +FI+L SRL +
Subjt:  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGD-IERKRFVVPIAYLNHPSFSALLSSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQS

AT4G34810.1 SAUR-like auxin-responsive protein family2.3e-2656.19Show/hide
Query:  MGIRLPSLLLNAKQAVKMHTASSRNRCG------VPKGHIAVYVG---DIERKRFVVPIAYLNHPSFSALLSSAEEEFGFKHPTGGLTIPCREDVFINL-
        MG+   ++    KQ +K+++ ++RNR        VPKGH+AVYVG   ++E+KRFVVPI++LNHPSF   LS AEEEFGF HP GGLTIPCRE+VF++L 
Subjt:  MGIRLPSLLLNAKQAVKMHTASSRNRCG------VPKGHIAVYVG---DIERKRFVVPIAYLNHPSFSALLSSAEEEFGFKHPTGGLTIPCREDVFINL-

Query:  TSRLQ
         SRLQ
Subjt:  TSRLQ

AT4G38840.1 SAUR-like auxin-responsive protein family1.5e-2554.64Show/hide
Query:  MGIRLPSLLLNAKQAVK----MHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLSSAEEEFGFKHPTGGLTIPCREDVFINLTSR
        M IR+P +L ++KQ ++    + ++SS +   VPKG++AVYVG+   KRFVVP++YL+ PSF  LL  AEEEFGF HP GGLTIPC E++FI+L SR
Subjt:  MGIRLPSLLLNAKQAVK----MHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLSSAEEEFGFKHPTGGLTIPCREDVFINLTSR

AT5G18030.1 SAUR-like auxin-responsive protein family2.0e-2560.92Show/hide
Query:  LLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLSSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ
        LL AK+ +   TAS+      PKG +AVYVG+ ++KR++VP++YL+ PSF ALLS +EEEFGF HP GGLTIPC ED FIN+TSRLQ
Subjt:  LLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLSSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ

AT5G18080.1 SAUR-like auxin-responsive protein family2.6e-2559.77Show/hide
Query:  LLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLSSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ
        LL AK+ +   T +       PKG +AVYVG+ ++KR++VP++YLN PSF ALLS +EEEFGF HP GGLTIPC ED FIN+TSRLQ
Subjt:  LLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLSSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATCAGACTACCTTCACTTCTTCTCAATGCCAAACAAGCTGTTAAAATGCATACCGCTTCTTCCAGAAACCGGTGTGGCGTTCCCAAAGGCCATATTGCAGTTTA
TGTGGGAGATATTGAGAGAAAGAGATTTGTAGTTCCAATAGCATACCTAAACCATCCTTCTTTTTCTGCTTTGCTCAGCAGTGCAGAAGAAGAATTTGGATTTAAACATC
CAACTGGAGGTCTTACAATTCCTTGCAGAGAAGATGTCTTCATCAATCTGACATCCAGGCTGCAATCTTGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAATCAGACTACCTTCACTTCTTCTCAATGCCAAACAAGCTGTTAAAATGCATACCGCTTCTTCCAGAAACCGGTGTGGCGTTCCCAAAGGCCATATTGCAGTTTA
TGTGGGAGATATTGAGAGAAAGAGATTTGTAGTTCCAATAGCATACCTAAACCATCCTTCTTTTTCTGCTTTGCTCAGCAGTGCAGAAGAAGAATTTGGATTTAAACATC
CAACTGGAGGTCTTACAATTCCTTGCAGAGAAGATGTCTTCATCAATCTGACATCCAGGCTGCAATCTTGCTGA
Protein sequenceShow/hide protein sequence
MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLSSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQSC