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CmoCh02G003460 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G003460
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionauxin-responsive protein SAUR24-like
Genome locationCmo_Chr02:1748006..1748299
RNA-Seq ExpressionCmoCh02G003460
SyntenyCmoCh02G003460
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605017.1 Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia]6.5e-4797.94Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
        MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPIS+LNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKE+AFIDLTSRLQVS
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS

XP_022947571.1 auxin-responsive protein SAUR24-like [Cucurbita moschata]5.9e-48100Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
        MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS

XP_022947576.1 auxin-responsive protein SAUR23-like [Cucurbita moschata]6.5e-4796.91Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
        MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRF+VPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAF+DLTSRL VS
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS

XP_023007091.1 auxin-responsive protein SAUR24-like [Cucurbita maxima]2.2e-4798.97Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
        MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQ LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS

XP_023533292.1 auxin-responsive protein SAUR24-like [Cucurbita pepo subsp. pepo]7.7e-4898.97Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
        MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAF+DLTSRLQVS
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS

TrEMBL top hitse value%identityAlignment
A0A6J1G6T7 auxin-responsive protein SAUR24-like2.8e-48100Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
        MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS

A0A6J1G6U1 auxin-responsive protein SAUR23-like3.1e-4796.91Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
        MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRF+VPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAF+DLTSRL VS
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS

A0A6J1G7A6 auxin-responsive protein SAUR24-like7.0e-4797.94Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
        MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHP FQKLLSHAEEEFGFHHPQG LTIPCKEDAFIDLTSRLQVS
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS

A0A6J1KZJ6 auxin-responsive protein SAUR24-like1.1e-4798.97Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
        MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQ LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS

A0A6J1L212 auxin-responsive protein SAUR24-like5.4e-4797.94Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
        MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDA IDL SRLQVS
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS

SwissProt top hitse value%identityAlignment
Q9FJF6 Auxin-responsive protein SAUR231.8e-2363.86Show/hide
Query:  AKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRL
        AK+IL   +    +    PKG +AVYVGE Q+KR+LVP+SYLN PSFQ LLS +EEEFGF HP GGLTIPC ED FI++TSRL
Subjt:  AKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRL

Q9FJF7 Auxin-responsive protein SAUR226.2e-2465.82Show/hide
Query:  KMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ
        K+ S  T +    PKG +AVYVGE Q+KR+LVP+SYLN PSFQ LLS +E+EFGF HP GGLTIPC ED FI++TSRLQ
Subjt:  KMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ

Q9FJG0 Auxin-responsive protein SAUR203.6e-2467.09Show/hide
Query:  KMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ
        K+ S  T +    PKG +AVYVGE Q+KR+LVPISYLN PSFQ LLS +EEEFGF HP GGLTIPC ED FI++TSR Q
Subjt:  KMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ

Q9FJG1 Auxin-responsive protein SAUR191.4e-2365.82Show/hide
Query:  KMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ
        K+ S  T +    PKG +AVYVGE Q+KR+LVP+SYL+ PSFQ LLS +EEEFGF HP GGLTIPC ED FI++TSRLQ
Subjt:  KMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ

Q9FK62 Auxin-responsive protein SAUR249.5e-2565.48Show/hide
Query:  AKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ
        AK+IL   +G   +    PKG +AVYVGE Q+KR+LVP+SYLN PSFQ LLS +EEEFGF HP GGLTIPC ED FI++TSRLQ
Subjt:  AKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family3.6e-2758.16Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGE-IQRKRFLVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS
        M IR+  ++  +KQ+LK  S  + + + +PKGH+AVYVGE +Q++RF+VP++YL+HP FQKLL  AEEEFGF HP GGLTIPC E  FIDL SRL  S
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGE-IQRKRFLVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS

AT4G34810.1 SAUR-like auxin-responsive protein family2.3e-2656.19Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKSQLD------VPKGHVAVYVG---EIQRKRFLVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFIDL-
        MG+   ++    KQILK+ S   +++        VPKGHVAVYVG   E+++KRF+VPIS+LNHPSF++ LS AEEEFGF+HP GGLTIPC+E+ F+DL 
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKSQLD------VPKGHVAVYVG---EIQRKRFLVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFIDL-

Query:  TSRLQ
         SRLQ
Subjt:  TSRLQ

AT4G38840.1 SAUR-like auxin-responsive protein family4.7e-2759.79Show/hide
Query:  MGIRLLSLVPHAKQILK----MQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSR
        M IR+  ++  +KQIL+    + S  + S LDVPKG++AVYVGE   KRF+VP+SYL+ PSFQ LL  AEEEFGF HP GGLTIPC E+ FIDL SR
Subjt:  MGIRLLSLVPHAKQILK----MQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSR

AT5G18020.1 SAUR-like auxin-responsive protein family2.6e-2567.09Show/hide
Query:  KMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ
        K+ S  T +    PKG +AVYVGE Q+KR+LVPISYLN PSFQ LLS +EEEFGF HP GGLTIPC ED FI++TSR Q
Subjt:  KMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ

AT5G18080.1 SAUR-like auxin-responsive protein family6.7e-2665.48Show/hide
Query:  AKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ
        AK+IL   +G   +    PKG +AVYVGE Q+KR+LVP+SYLN PSFQ LLS +EEEFGF HP GGLTIPC ED FI++TSRLQ
Subjt:  AKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGATTCGATTGCTATCCTTGGTTCCTCATGCCAAGCAGATCCTAAAGATGCAGTCAGGTTTTACCAAAAGTCAGTTGGATGTGCCAAAAGGCCATGTGGCTGTTTA
TGTAGGAGAGATTCAAAGAAAGCGGTTTTTGGTTCCAATTTCTTACTTAAACCATCCATCATTCCAAAAACTACTCAGCCATGCAGAGGAAGAGTTTGGCTTCCATCATC
CACAAGGGGGTCTAACAATTCCTTGCAAGGAGGATGCCTTCATTGATCTCACCTCTAGATTGCAAGTATCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGATTCGATTGCTATCCTTGGTTCCTCATGCCAAGCAGATCCTAAAGATGCAGTCAGGTTTTACCAAAAGTCAGTTGGATGTGCCAAAAGGCCATGTGGCTGTTTA
TGTAGGAGAGATTCAAAGAAAGCGGTTTTTGGTTCCAATTTCTTACTTAAACCATCCATCATTCCAAAAACTACTCAGCCATGCAGAGGAAGAGTTTGGCTTCCATCATC
CACAAGGGGGTCTAACAATTCCTTGCAAGGAGGATGCCTTCATTGATCTCACCTCTAGATTGCAAGTATCTTGA
Protein sequenceShow/hide protein sequence
MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS