; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh02G003480 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G003480
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionauxin-responsive protein SAUR24-like
Genome locationCmo_Chr02:1749949..1750242
RNA-Seq ExpressionCmoCh02G003480
SyntenyCmoCh02G003480
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022947574.1 auxin-responsive protein SAUR21-like [Cucurbita moschata]1.7e-4798.97Show/hide
Query:  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS
        MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLL HAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS
Subjt:  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS

XP_022947577.1 auxin-responsive protein SAUR21-like [Cucurbita moschata]3.4e-48100Show/hide
Query:  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS
        MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS
Subjt:  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS

XP_023007089.1 auxin-responsive protein SAUR21-like [Cucurbita maxima]6.5e-4796.91Show/hide
Query:  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS
        MGIRLLSLVP+AKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLGHAEEEFGFHHPQGGLTIPC+EDAF+DLTSRLQVS
Subjt:  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS

XP_023533293.1 auxin-responsive protein SAUR21-like [Cucurbita pepo subsp. pepo]2.2e-4797.94Show/hide
Query:  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS
        MGIRLLSLVPHAKQILK QSSFTKNQLDVPKGHVAVYVGEIQRKRFV+PISYLNHPSFQKLLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS
Subjt:  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS

XP_023533295.1 auxin-responsive protein SAUR21-like [Cucurbita pepo subsp. pepo]1.3e-4798.97Show/hide
Query:  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS
        MG RLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS
Subjt:  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS

TrEMBL top hitse value%identityAlignment
A0A6J1CWI9 auxin-responsive protein SAUR21-like5.9e-4693.81Show/hide
Query:  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS
        MGIRLLSLVPHAKQILKMQSSFTKNQ+DVPK HVAVYVGEIQRKRFVVPISYLNHPSFQ+LL HAEEEFGFHHPQGGLTIPC+EDAF+DLTSRLQVS
Subjt:  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS

A0A6J1G6T7 auxin-responsive protein SAUR24-like5.9e-4693.81Show/hide
Query:  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS
        MGIRLLSLVPHAKQILKMQS FTK+QLDVPKGHVAVYVGEIQRKRF+VPISYLNHPSFQKLL HAEEEFGFHHPQGGLTIPC+EDAF+DLTSRLQVS
Subjt:  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS

A0A6J1G6U7 auxin-responsive protein SAUR21-like1.7e-48100Show/hide
Query:  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS
        MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS
Subjt:  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS

A0A6J1G772 auxin-responsive protein SAUR21-like8.3e-4898.97Show/hide
Query:  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS
        MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLL HAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS
Subjt:  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS

A0A6J1L403 auxin-responsive protein SAUR21-like3.1e-4796.91Show/hide
Query:  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS
        MGIRLLSLVP+AKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLGHAEEEFGFHHPQGGLTIPC+EDAF+DLTSRLQVS
Subjt:  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS

SwissProt top hitse value%identityAlignment
Q9FJF7 Auxin-responsive protein SAUR226.8e-2362.03Show/hide
Query:  KMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQ
        K+ S  T      PKG +AVYVGE Q+KR++VP+SYLN PSFQ LL  +E+EFGF HP GGLTIPC ED F+++TSRLQ
Subjt:  KMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQ

Q9FJF9 Auxin-responsive protein SAUR212.0e-2259.52Show/hide
Query:  AKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQ
        AK+IL   ++        PKG +AVYVGE Q+KR++VP+SYL+ PSFQ LL  +EEEFGF HP GGLTIPC ED F+++TSRLQ
Subjt:  AKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQ

Q9FJG0 Auxin-responsive protein SAUR206.8e-2363.29Show/hide
Query:  KMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQ
        K+ S  T      PKG +AVYVGE Q+KR++VPISYLN PSFQ LL  +EEEFGF HP GGLTIPC ED F+++TSR Q
Subjt:  KMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQ

Q9FJG1 Auxin-responsive protein SAUR192.6e-2262.03Show/hide
Query:  KMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQ
        K+ S  T      PKG +AVYVGE Q+KR++VP+SYL+ PSFQ LL  +EEEFGF HP GGLTIPC ED F+++TSRLQ
Subjt:  KMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQ

Q9FK62 Auxin-responsive protein SAUR245.2e-2371.21Show/hide
Query:  PKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQ
        PKG +AVYVGE Q+KR++VP+SYLN PSFQ LL  +EEEFGF HP GGLTIPC ED F+++TSRLQ
Subjt:  PKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQ

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family5.5e-2859.18Show/hide
Query:  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGE-IQRKRFVVPISYLNHPSFQKLLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS
        M IR+  ++  +KQ+LK   S + N + +PKGH+AVYVGE +Q++RFVVP++YL+HP FQKLL  AEEEFGF HP GGLTIPC E  F+DL SRL  S
Subjt:  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGE-IQRKRFVVPISYLNHPSFQKLLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS

AT4G34790.1 SAUR-like auxin-responsive protein family2.0e-2555.56Show/hide
Query:  MGIRLLSLVPHAKQILKMQSSFTKNQLD-----------VPKGHVAVYVGE-IQRKRFVVPISYLNHPSFQKLLGHAEEEFGFHHPQGGLTIPCREDAFV
        MG+ + S++P+AKQI K QS   KN              VPKGHVAVYVGE +++KRFVVPISYLNHP F++ L  AEEE GFHH  GGLTIPCRE++F+
Subjt:  MGIRLLSLVPHAKQILKMQSSFTKNQLD-----------VPKGHVAVYVGE-IQRKRFVVPISYLNHPSFQKLLGHAEEEFGFHHPQGGLTIPCREDAFV

Query:  DLTSRLQV
         L +  Q+
Subjt:  DLTSRLQV

AT4G34800.1 SAUR-like auxin-responsive protein family9.7e-2567.39Show/hide
Query:  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGE--IQRKRFVVPISYLNHPSFQKLLGHAEEEFGFHHPQGGLTIPCREDAFVDL
        M IR LS V ++KQ  K QS        VPKGHVAVYVGE    +KRFVVPISYLNHPSFQ LL  AEEEFGF+HP GGLTIPCRE+ FV L
Subjt:  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGE--IQRKRFVVPISYLNHPSFQKLLGHAEEEFGFHHPQGGLTIPCREDAFVDL

AT4G34810.1 SAUR-like auxin-responsive protein family3.6e-2758.1Show/hide
Query:  MGIRLLSLVPHAKQILKMQSSFTKNQLD------VPKGHVAVYVG---EIQRKRFVVPISYLNHPSFQKLLGHAEEEFGFHHPQGGLTIPCREDAFVDL-
        MG+   ++    KQILK+ S   +N+        VPKGHVAVYVG   E+++KRFVVPIS+LNHPSF++ L  AEEEFGF+HP GGLTIPCRE+ F+DL 
Subjt:  MGIRLLSLVPHAKQILKMQSSFTKNQLD------VPKGHVAVYVG---EIQRKRFVVPISYLNHPSFQKLLGHAEEEFGFHHPQGGLTIPCREDAFVDL-

Query:  TSRLQ
         SRLQ
Subjt:  TSRLQ

AT4G38840.1 SAUR-like auxin-responsive protein family3.6e-2759.79Show/hide
Query:  MGIRLLSLVPHAKQILK----MQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSR
        M IR+  ++  +KQIL+    + SS + + LDVPKG++AVYVGE   KRFVVP+SYL+ PSFQ LL  AEEEFGF HP GGLTIPC E+ F+DL SR
Subjt:  MGIRLLSLVPHAKQILK----MQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGATTCGGTTGCTATCTTTGGTTCCTCATGCCAAGCAAATTCTAAAGATGCAGTCAAGTTTCACCAAAAACCAGTTGGACGTTCCAAAAGGCCATGTGGCTGTTTA
TGTGGGAGAGATCCAAAGGAAACGATTCGTGGTTCCGATATCTTACCTAAACCATCCATCGTTCCAGAAACTGCTCGGTCATGCCGAGGAGGAGTTTGGCTTCCATCATC
CACAAGGAGGCCTAACAATTCCTTGCAGGGAAGATGCCTTTGTTGATCTCACTTCTAGATTGCAAGTTTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGATTCGGTTGCTATCTTTGGTTCCTCATGCCAAGCAAATTCTAAAGATGCAGTCAAGTTTCACCAAAAACCAGTTGGACGTTCCAAAAGGCCATGTGGCTGTTTA
TGTGGGAGAGATCCAAAGGAAACGATTCGTGGTTCCGATATCTTACCTAAACCATCCATCGTTCCAGAAACTGCTCGGTCATGCCGAGGAGGAGTTTGGCTTCCATCATC
CACAAGGAGGCCTAACAATTCCTTGCAGGGAAGATGCCTTTGTTGATCTCACTTCTAGATTGCAAGTTTCTTGA
Protein sequenceShow/hide protein sequence
MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLGHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS