; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh02G003490 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G003490
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionauxin-responsive protein SAUR24-like
Genome locationCmo_Chr02:1750420..1754910
RNA-Seq ExpressionCmoCh02G003490
SyntenyCmoCh02G003490
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022947571.1 auxin-responsive protein SAUR24-like [Cucurbita moschata]3.8e-4597.87Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRL
        MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRF+VPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAF+DLTSRL
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRL

XP_022947576.1 auxin-responsive protein SAUR23-like [Cucurbita moschata]1.2e-46100Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLH
        MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLH
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLH

XP_023007091.1 auxin-responsive protein SAUR24-like [Cucurbita maxima]1.5e-4496.81Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRL
        MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRF+VPISYLNHPSFQ LLSHAEEEFGFHHPQGGLTIPCKEDAF+DLTSRL
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRL

XP_023533292.1 auxin-responsive protein SAUR24-like [Cucurbita pepo subsp. pepo]2.9e-4598.94Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRL
        MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRF+VPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRL
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRL

XP_023533294.1 auxin-responsive protein SAUR23-like [Cucurbita pepo subsp. pepo]4.5e-4697.89Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLH
        MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRF+VPISYLNHPSFQK+LSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLH
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLH

TrEMBL top hitse value%identityAlignment
A0A6J1CYH2 auxin-responsive protein SAUR23-like7.0e-4594.74Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLH
        MGIRLLSLVPHAK ILKMQSGFTK+ LDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQ+LLSHAEEEFGFHHPQGGLTIPCKEDAF+DLTSRLH
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLH

A0A6J1FU85 auxin-responsive protein SAUR23-like1.6e-4493.68Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLH
        MGIR LSLVPHAKQILKMQ GFTK+QLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQ+LLSHAEE+FGFHHPQGGLTIPCKEDAF+DLTSRLH
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLH

A0A6J1G6T7 auxin-responsive protein SAUR24-like1.8e-4597.87Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRL
        MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRF+VPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAF+DLTSRL
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRL

A0A6J1G6U1 auxin-responsive protein SAUR23-like5.7e-47100Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLH
        MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLH
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLH

A0A6J1KZJ6 auxin-responsive protein SAUR24-like7.0e-4596.81Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRL
        MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRF+VPISYLNHPSFQ LLSHAEEEFGFHHPQGGLTIPCKEDAF+DLTSRL
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRL

SwissProt top hitse value%identityAlignment
Q9FJF6 Auxin-responsive protein SAUR233.3e-2361.9Show/hide
Query:  AKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLH
        AK+IL   +    +    PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +EEEFGF HP GGLTIPC ED F+++TSRLH
Subjt:  AKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLH

Q9FJF7 Auxin-responsive protein SAUR223.6e-2262.82Show/hide
Query:  KMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRL
        K+ S  T +    PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +E+EFGF HP GGLTIPC ED F+++TSRL
Subjt:  KMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRL

Q9FJG0 Auxin-responsive protein SAUR202.1e-2264.94Show/hide
Query:  KMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSR
        K+ S  T +    PKG +AVYVGE Q+KR++VPISYLN PSFQ LLS +EEEFGF HP GGLTIPC ED F+++TSR
Subjt:  KMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSR

Q9FJG1 Auxin-responsive protein SAUR198.0e-2262.82Show/hide
Query:  KMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRL
        K+ S  T +    PKG +AVYVGE Q+KR++VP+SYL+ PSFQ LLS +EEEFGF HP GGLTIPC ED F+++TSRL
Subjt:  KMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRL

Q9FK62 Auxin-responsive protein SAUR245.6e-2362.65Show/hide
Query:  AKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRL
        AK+IL   +G   +    PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +EEEFGF HP GGLTIPC ED F+++TSRL
Subjt:  AKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRL

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family1.5e-2658.76Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGE-IQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLHT
        M IR+  ++  +KQ+LK  S  + + + +PKGH+AVYVGE +Q++RFVVP++YL+HP FQKLL  AEEEFGF HP GGLTIPC E  F+DL SRL T
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGE-IQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLHT

AT4G34800.1 SAUR-like auxin-responsive protein family1.0e-2463.37Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGE--IQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLHTMV
        M IR LS V ++KQ  K QS        VPKGHVAVYVGE    +KRFVVPISYLNHPSFQ LLS AEEEFGF+HP GGLTIPC+E+ FV L +    +V
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGE--IQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLHTMV

Query:  S
        S
Subjt:  S

AT4G34810.1 SAUR-like auxin-responsive protein family3.6e-2556.73Show/hide
Query:  MGIRLLSLVPHAKQILKMQSGFTKSQLD------VPKGHVAVYVG---EIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFVDL-
        MG+   ++    KQILK+ S   +++        VPKGHVAVYVG   E+++KRFVVPIS+LNHPSF++ LS AEEEFGF+HP GGLTIPC+E+ F+DL 
Subjt:  MGIRLLSLVPHAKQILKMQSGFTKSQLD------VPKGHVAVYVG---EIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFVDL-

Query:  TSRL
         SRL
Subjt:  TSRL

AT4G38840.1 SAUR-like auxin-responsive protein family8.5e-2758.59Show/hide
Query:  MGIRLLSLVPHAKQILK----MQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLH
        M IR+  ++  +KQIL+    + S  + S LDVPKG++AVYVGE   KRFVVP+SYL+ PSFQ LL  AEEEFGF HP GGLTIPC E+ F+DL SR +
Subjt:  MGIRLLSLVPHAKQILK----MQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLH

AT5G18060.1 SAUR-like auxin-responsive protein family2.3e-2461.9Show/hide
Query:  AKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLH
        AK+IL   +    +    PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +EEEFGF HP GGLTIPC ED F+++TSRLH
Subjt:  AKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSRLH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATCTGGTGCTCCTAATGATAAGTATGGAGAAAGGTTTACCGAGCGCTTTCGTGTCTTAAATGTCTTTCATCTCAAGCAAATGGGTATTCGATTGCTATCCTTGGT
TCCTCATGCCAAGCAGATCCTAAAGATGCAGTCAGGTTTTACCAAAAGTCAGCTGGATGTGCCAAAAGGTCATGTGGCTGTTTATGTGGGAGAGATCCAAAGAAAGCGGT
TCGTGGTTCCAATTTCTTACTTAAACCATCCATCATTCCAAAAGCTACTCAGCCATGCAGAAGAAGAGTTTGGCTTCCATCATCCACAAGGGGGTCTAACAATTCCTTGC
AAGGAGGATGCCTTCGTTGATCTCACCTCTAGACTGCACACAATGGTCTCTCTCATCTATAAGCAAGACAATGACGCTGAACTGAAGAAAGCTCAATGTGAAAGAAGCAA
AAGATCCACTTCCGCCACGAAAGGAGAGATTCATTCTTTTTGTCAAGCAAATTCTAAAATGCCATCAGATTTCACCAAAAACCCGTATGTTTCAAAAGGTCATGTAGCAT
ACGAAATGATTTGTGGTTCCGATATCATACTTGAATCATCCTTCATTCTAAAAGCTCCTTATCAAGATTGCAGCTTGGATGTGAGATTGATGAAGACATCTTCTCTGCAA
GGAATTACGCACTTCATCATGTGCCCTAACAAACCATTGAGCAGTCCCATTTGCTCCAATGAGTTGGACTATGACTTGACTTGTGATGAATGGAAACAATTGACCAATGA
GCCTGAAATTAGTGGTATGAATTTCAGAGAATGTGCTGTGAGAGAAGAAAATTGGGTGCCTTTTTCTGAGATGAGGCAAAGCCATGTGAAGGGGTATTCTCAAATATACC
CAACTACCAGACATCAGTACCCCACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCATCTGGTGCTCCTAATGATAAGTATGGAGAAAGGTTTACCGAGCGCTTTCGTGTCTTAAATGTCTTTCATCTCAAGCAAATGGGTATTCGATTGCTATCCTTGGT
TCCTCATGCCAAGCAGATCCTAAAGATGCAGTCAGGTTTTACCAAAAGTCAGCTGGATGTGCCAAAAGGTCATGTGGCTGTTTATGTGGGAGAGATCCAAAGAAAGCGGT
TCGTGGTTCCAATTTCTTACTTAAACCATCCATCATTCCAAAAGCTACTCAGCCATGCAGAAGAAGAGTTTGGCTTCCATCATCCACAAGGGGGTCTAACAATTCCTTGC
AAGGAGGATGCCTTCGTTGATCTCACCTCTAGACTGCACACAATGGTCTCTCTCATCTATAAGCAAGACAATGACGCTGAACTGAAGAAAGCTCAATGTGAAAGAAGCAA
AAGATCCACTTCCGCCACGAAAGGAGAGATTCATTCTTTTTGTCAAGCAAATTCTAAAATGCCATCAGATTTCACCAAAAACCCGTATGTTTCAAAAGGTCATGTAGCAT
ACGAAATGATTTGTGGTTCCGATATCATACTTGAATCATCCTTCATTCTAAAAGCTCCTTATCAAGATTGCAGCTTGGATGTGAGATTGATGAAGACATCTTCTCTGCAA
GGAATTACGCACTTCATCATGTGCCCTAACAAACCATTGAGCAGTCCCATTTGCTCCAATGAGTTGGACTATGACTTGACTTGTGATGAATGGAAACAATTGACCAATGA
GCCTGAAATTAGTGGTATGAATTTCAGAGAATGTGCTGTGAGAGAAGAAAATTGGGTGCCTTTTTCTGAGATGAGGCAAAGCCATGTGAAGGGGTATTCTCAAATATACC
CAACTACCAGACATCAGTACCCCACTTAG
Protein sequenceShow/hide protein sequence
MSSGAPNDKYGERFTERFRVLNVFHLKQMGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPC
KEDAFVDLTSRLHTMVSLIYKQDNDAELKKAQCERSKRSTSATKGEIHSFCQANSKMPSDFTKNPYVSKGHVAYEMICGSDIILESSFILKAPYQDCSLDVRLMKTSSLQ
GITHFIMCPNKPLSSPICSNELDYDLTCDEWKQLTNEPEISGMNFRECAVREENWVPFSEMRQSHVKGYSQIYPTTRHQYPT