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CmoCh02G003500 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G003500
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionauxin-responsive protein SAUR21-like
Genome locationCmo_Chr02:1750951..1751244
RNA-Seq ExpressionCmoCh02G003500
SyntenyCmoCh02G003500
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605018.1 Auxin-responsive protein SAUR21, partial [Cucurbita argyrosperma subsp. sororia]6.1e-4594.85Show/hide
Query:  MGIRLLSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIETKRFVVPIAYLNHPSFSALLNRAEEEFGFKHPTGGLTIPCREDVFINLTSKLQSC
        MGIRL SLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIE KRFVVPIAYLNHPSFSALL+ AEEEFGFKHPTGGLTIPCREDVFINLTS+LQSC
Subjt:  MGIRLLSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIETKRFVVPIAYLNHPSFSALLNRAEEEFGFKHPTGGLTIPCREDVFINLTSKLQSC

KAG6605025.1 Auxin-responsive protein SAUR21, partial [Cucurbita argyrosperma subsp. sororia]4.5e-48100Show/hide
Query:  MGIRLLSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIETKRFVVPIAYLNHPSFSALLNRAEEEFGFKHPTGGLTIPCREDVFINLTSKLQSC
        MGIRLLSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIETKRFVVPIAYLNHPSFSALLNRAEEEFGFKHPTGGLTIPCREDVFINLTSKLQSC
Subjt:  MGIRLLSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIETKRFVVPIAYLNHPSFSALLNRAEEEFGFKHPTGGLTIPCREDVFINLTSKLQSC

XP_023533162.1 auxin-responsive protein SAUR21-like [Cucurbita pepo subsp. pepo]1.8e-4495.83Show/hide
Query:  MGIRLLSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIETKRFVVPIAYLNHPSFSALLNRAEEEFGFKHPTGGLTIPCREDVFINLTSKLQS
        MGIRL SLLL+AKQAVKMHTASSRN+CGVPKGHIAVYVGDIE KRFVVPIAYLNHPSFSALLNRAEEEFGFKHPTGGLTIPCREDVFINLTSKLQS
Subjt:  MGIRLLSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIETKRFVVPIAYLNHPSFSALLNRAEEEFGFKHPTGGLTIPCREDVFINLTSKLQS

XP_023533163.1 auxin-responsive protein SAUR21-like [Cucurbita pepo subsp. pepo]3.2e-4696.91Show/hide
Query:  MGIRLLSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIETKRFVVPIAYLNHPSFSALLNRAEEEFGFKHPTGGLTIPCREDVFINLTSKLQSC
        MGIRL SLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIE KRFVVPIAYLNHPSFSALLNRAEEEFGFKHPTGGLTIPCREDVFINLTS+LQSC
Subjt:  MGIRLLSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIETKRFVVPIAYLNHPSFSALLNRAEEEFGFKHPTGGLTIPCREDVFINLTSKLQSC

XP_023533287.1 auxin-responsive protein SAUR21-like [Cucurbita pepo subsp. pepo]7.2e-4695.88Show/hide
Query:  MGIRLLSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIETKRFVVPIAYLNHPSFSALLNRAEEEFGFKHPTGGLTIPCREDVFINLTSKLQSC
        MGIRL SLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGD+E KRFVVPIAYLNHPSFSALLNRAEEEFGFKHPTGGLTIPCREDVFINLTS+LQSC
Subjt:  MGIRLLSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIETKRFVVPIAYLNHPSFSALLNRAEEEFGFKHPTGGLTIPCREDVFINLTSKLQSC

TrEMBL top hitse value%identityAlignment
A0A0A0LM71 Uncharacterized protein4.4e-4188.42Show/hide
Query:  MGIRLLSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIETKRFVVPIAYLNHPSFSALLNRAEEEFGFKHPTGGLTIPCREDVFINLTSKLQ
        MGIRL SLLLNAKQ  KMHT SSRN+CGVPKGHIAVYVGDIE KRFVVP++YLNHPSFSALL  AEEEFGFKHPTGGLTIPCREDVFINLTS+LQ
Subjt:  MGIRLLSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIETKRFVVPIAYLNHPSFSALLNRAEEEFGFKHPTGGLTIPCREDVFINLTSKLQ

A0A1S3C787 auxin-responsive protein SAUR21-like1.3e-4087.37Show/hide
Query:  MGIRLLSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIETKRFVVPIAYLNHPSFSALLNRAEEEFGFKHPTGGLTIPCREDVFINLTSKLQ
        MGIRL SLL NAKQ  KMHT SSRN+CGVPKGHIAVYVGDIE KRFVVP++YLNHPSFSALL  AEEEFGFKHPTGGLTIPCREDVFINLTS+LQ
Subjt:  MGIRLLSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIETKRFVVPIAYLNHPSFSALLNRAEEEFGFKHPTGGLTIPCREDVFINLTSKLQ

A0A5D3BMR1 Auxin-responsive protein SAUR21-like1.3e-4087.37Show/hide
Query:  MGIRLLSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIETKRFVVPIAYLNHPSFSALLNRAEEEFGFKHPTGGLTIPCREDVFINLTSKLQ
        MGIRL SLL NAKQ  KMHT SSRN+CGVPKGHIAVYVGDIE KRFVVP++YLNHPSFSALL  AEEEFGFKHPTGGLTIPCREDVFINLTS+LQ
Subjt:  MGIRLLSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIETKRFVVPIAYLNHPSFSALLNRAEEEFGFKHPTGGLTIPCREDVFINLTSKLQ

A0A6J1FVH4 auxin-responsive protein SAUR21-like2.2e-4087.5Show/hide
Query:  MGIRLLSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIETKRFVVPIAYLNHPSFSALLNRAEEEFGFKHPTGGLTIPCREDVFINLTSKLQS
        MGIRL SLLLNAKQ VKM T SSRN+CGVPKGHIAVYVGD E KRFVVPI+YLNHPSFSALL  AEEEFGFKHPTGGLTIPCREDVFINLTS+LQ+
Subjt:  MGIRLLSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIETKRFVVPIAYLNHPSFSALLNRAEEEFGFKHPTGGLTIPCREDVFINLTSKLQS

A0A6J1JGW3 auxin-responsive protein SAUR21-like1.7e-4087.5Show/hide
Query:  MGIRLLSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIETKRFVVPIAYLNHPSFSALLNRAEEEFGFKHPTGGLTIPCREDVFINLTSKLQS
        MGIRL SLLLNAKQ VKM T  SRN+CGVPKGHIAVYVGDIE KRFVVPI+YLNHPSFSALL  AEEEFGFKHPTGGLTIPCREDVFINLTS+LQ+
Subjt:  MGIRLLSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIETKRFVVPIAYLNHPSFSALLNRAEEEFGFKHPTGGLTIPCREDVFINLTSKLQS

SwissProt top hitse value%identityAlignment
Q9FJF7 Auxin-responsive protein SAUR221.8e-2356.04Show/hide
Query:  LLSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIETKRFVVPIAYLNHPSFSALLNRAEEEFGFKHPTGGLTIPCREDVFINLTSKLQ
        L+  LL AK+ +   TA+       PKG +AVYVG+ + KR++VP++YLN PSF ALL+++E+EFGF HP GGLTIPC ED FIN+TS+LQ
Subjt:  LLSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIETKRFVVPIAYLNHPSFSALLNRAEEEFGFKHPTGGLTIPCREDVFINLTSKLQ

Q9FJF9 Auxin-responsive protein SAUR211.4e-2357.14Show/hide
Query:  LLSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIETKRFVVPIAYLNHPSFSALLNRAEEEFGFKHPTGGLTIPCREDVFINLTSKLQ
        L+  LL AK+ +   TAS+      PKG +AVYVG+ + KR++VP++YL+ PSF ALL+++EEEFGF HP GGLTIPC ED FIN+TS+LQ
Subjt:  LLSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIETKRFVVPIAYLNHPSFSALLNRAEEEFGFKHPTGGLTIPCREDVFINLTSKLQ

Q9FJG0 Auxin-responsive protein SAUR203.1e-2357.47Show/hide
Query:  LLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIETKRFVVPIAYLNHPSFSALLNRAEEEFGFKHPTGGLTIPCREDVFINLTSKLQ
        LL AK+ +   T ++      PKG +AVYVG+ + KR++VPI+YLN PSF ALL+++EEEFGF HP GGLTIPC ED FIN+TS+ Q
Subjt:  LLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIETKRFVVPIAYLNHPSFSALLNRAEEEFGFKHPTGGLTIPCREDVFINLTSKLQ

Q9FJG1 Auxin-responsive protein SAUR193.1e-2357.47Show/hide
Query:  LLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIETKRFVVPIAYLNHPSFSALLNRAEEEFGFKHPTGGLTIPCREDVFINLTSKLQ
        LL AK+ +   TA+       PKG +AVYVG+ + KR++VP++YL+ PSF ALL+++EEEFGF HP GGLTIPC ED FIN+TS+LQ
Subjt:  LLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIETKRFVVPIAYLNHPSFSALLNRAEEEFGFKHPTGGLTIPCREDVFINLTSKLQ

Q9FK62 Auxin-responsive protein SAUR241.8e-2357.47Show/hide
Query:  LLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIETKRFVVPIAYLNHPSFSALLNRAEEEFGFKHPTGGLTIPCREDVFINLTSKLQ
        LL AK+ +   T +       PKG +AVYVG+ + KR++VP++YLN PSF ALL+++EEEFGF HP GGLTIPC ED FIN+TS+LQ
Subjt:  LLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIETKRFVVPIAYLNHPSFSALLNRAEEEFGFKHPTGGLTIPCREDVFINLTSKLQ

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family2.6e-2554.64Show/hide
Query:  MGIRLLSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGD-IETKRFVVPIAYLNHPSFSALLNRAEEEFGFKHPTGGLTIPCREDVFINLTSKLQS
        M IR+  +L ++KQ +K  + SS N   +PKGH+AVYVG+ ++ +RFVVP+ YL+HP F  LL +AEEEFGF HP GGLTIPC E +FI+L S+L +
Subjt:  MGIRLLSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGD-IETKRFVVPIAYLNHPSFSALLNRAEEEFGFKHPTGGLTIPCREDVFINLTSKLQS

AT4G34810.1 SAUR-like auxin-responsive protein family2.3e-2655.24Show/hide
Query:  MGIRLLSLLLNAKQAVKMHTASSRNRCG------VPKGHIAVYVG---DIETKRFVVPIAYLNHPSFSALLNRAEEEFGFKHPTGGLTIPCREDVFINL-
        MG+   ++    KQ +K+++ ++RNR        VPKGH+AVYVG   ++E KRFVVPI++LNHPSF   L+RAEEEFGF HP GGLTIPCRE+VF++L 
Subjt:  MGIRLLSLLLNAKQAVKMHTASSRNRCG------VPKGHIAVYVG---DIETKRFVVPIAYLNHPSFSALLNRAEEEFGFKHPTGGLTIPCREDVFINL-

Query:  TSKLQ
         S+LQ
Subjt:  TSKLQ

AT5G18030.1 SAUR-like auxin-responsive protein family9.7e-2557.14Show/hide
Query:  LLSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIETKRFVVPIAYLNHPSFSALLNRAEEEFGFKHPTGGLTIPCREDVFINLTSKLQ
        L+  LL AK+ +   TAS+      PKG +AVYVG+ + KR++VP++YL+ PSF ALL+++EEEFGF HP GGLTIPC ED FIN+TS+LQ
Subjt:  LLSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIETKRFVVPIAYLNHPSFSALLNRAEEEFGFKHPTGGLTIPCREDVFINLTSKLQ

AT5G18050.1 SAUR-like auxin-responsive protein family1.3e-2456.04Show/hide
Query:  LLSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIETKRFVVPIAYLNHPSFSALLNRAEEEFGFKHPTGGLTIPCREDVFINLTSKLQ
        L+  LL AK+ +   TA+       PKG +AVYVG+ + KR++VP++YLN PSF ALL+++E+EFGF HP GGLTIPC ED FIN+TS+LQ
Subjt:  LLSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIETKRFVVPIAYLNHPSFSALLNRAEEEFGFKHPTGGLTIPCREDVFINLTSKLQ

AT5G18080.1 SAUR-like auxin-responsive protein family1.3e-2457.47Show/hide
Query:  LLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIETKRFVVPIAYLNHPSFSALLNRAEEEFGFKHPTGGLTIPCREDVFINLTSKLQ
        LL AK+ +   T +       PKG +AVYVG+ + KR++VP++YLN PSF ALL+++EEEFGF HP GGLTIPC ED FIN+TS+LQ
Subjt:  LLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIETKRFVVPIAYLNHPSFSALLNRAEEEFGFKHPTGGLTIPCREDVFINLTSKLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATCAGACTACTTTCACTTCTTCTCAATGCCAAGCAAGCTGTCAAAATGCATACCGCTTCTTCCAGAAACCGGTGTGGCGTTCCCAAAGGCCATATTGCAGTTTA
TGTGGGAGATATTGAGACAAAGAGATTTGTAGTTCCAATAGCATACTTAAACCATCCTTCTTTTTCTGCTTTGCTCAACCGTGCCGAAGAAGAATTTGGATTTAAACATC
CAACTGGAGGTCTTACAATTCCTTGCAGAGAAGATGTCTTCATCAATCTCACATCCAAGCTGCAATCTTGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAATCAGACTACTTTCACTTCTTCTCAATGCCAAGCAAGCTGTCAAAATGCATACCGCTTCTTCCAGAAACCGGTGTGGCGTTCCCAAAGGCCATATTGCAGTTTA
TGTGGGAGATATTGAGACAAAGAGATTTGTAGTTCCAATAGCATACTTAAACCATCCTTCTTTTTCTGCTTTGCTCAACCGTGCCGAAGAAGAATTTGGATTTAAACATC
CAACTGGAGGTCTTACAATTCCTTGCAGAGAAGATGTCTTCATCAATCTCACATCCAAGCTGCAATCTTGCTGA
Protein sequenceShow/hide protein sequence
MGIRLLSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIETKRFVVPIAYLNHPSFSALLNRAEEEFGFKHPTGGLTIPCREDVFINLTSKLQSC