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CmoCh02G003510 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G003510
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionauxin-responsive protein SAUR21-like
Genome locationCmo_Chr02:1756158..1756451
RNA-Seq ExpressionCmoCh02G003510
SyntenyCmoCh02G003510
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605018.1 Auxin-responsive protein SAUR21, partial [Cucurbita argyrosperma subsp. sororia]2.7e-4596.88Show/hide
Query:  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLNRAEEEFEFKHPTGGLTIPCREDVFINLTSRLQS
        MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALL+ AEEEF FKHPTGGLTIPCREDVFINLTSRLQS
Subjt:  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLNRAEEEFEFKHPTGGLTIPCREDVFINLTSRLQS

KAG6605027.1 Auxin-responsive protein SAUR21, partial [Cucurbita argyrosperma subsp. sororia]7.7e-48100Show/hide
Query:  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLNRAEEEFEFKHPTGGLTIPCREDVFINLTSRLQSS
        MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLNRAEEEFEFKHPTGGLTIPCREDVFINLTSRLQSS
Subjt:  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLNRAEEEFEFKHPTGGLTIPCREDVFINLTSRLQSS

XP_023533162.1 auxin-responsive protein SAUR21-like [Cucurbita pepo subsp. pepo]1.2e-4595.88Show/hide
Query:  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLNRAEEEFEFKHPTGGLTIPCREDVFINLTSRLQSS
        MGIRLPSLLL+AKQAVKMHTASSRN+CGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLNRAEEEF FKHPTGGLTIPCREDVFINLTS+LQSS
Subjt:  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLNRAEEEFEFKHPTGGLTIPCREDVFINLTSRLQSS

XP_023533163.1 auxin-responsive protein SAUR21-like [Cucurbita pepo subsp. pepo]1.4e-4698.96Show/hide
Query:  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLNRAEEEFEFKHPTGGLTIPCREDVFINLTSRLQS
        MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLNRAEEEF FKHPTGGLTIPCREDVFINLTSRLQS
Subjt:  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLNRAEEEFEFKHPTGGLTIPCREDVFINLTSRLQS

XP_023533287.1 auxin-responsive protein SAUR21-like [Cucurbita pepo subsp. pepo]3.2e-4697.92Show/hide
Query:  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLNRAEEEFEFKHPTGGLTIPCREDVFINLTSRLQS
        MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGD+ERKRFVVPIAYLNHPSFSALLNRAEEEF FKHPTGGLTIPCREDVFINLTSRLQS
Subjt:  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLNRAEEEFEFKHPTGGLTIPCREDVFINLTSRLQS

TrEMBL top hitse value%identityAlignment
A0A0A0LM71 Uncharacterized protein1.0e-4289.69Show/hide
Query:  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLNRAEEEFEFKHPTGGLTIPCREDVFINLTSRLQSS
        MGIRLPSLLLNAKQ  KMHT SSRN+CGVPKGHIAVYVGDIERKRFVVP++YLNHPSFSALL  AEEEF FKHPTGGLTIPCREDVFINLTSRLQ S
Subjt:  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLNRAEEEFEFKHPTGGLTIPCREDVFINLTSRLQSS

A0A1S3C787 auxin-responsive protein SAUR21-like3.0e-4288.66Show/hide
Query:  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLNRAEEEFEFKHPTGGLTIPCREDVFINLTSRLQSS
        MGIRLPSLL NAKQ  KMHT SSRN+CGVPKGHIAVYVGDIERKRFVVP++YLNHPSFSALL  AEEEF FKHPTGGLTIPCREDVFINLTSRLQ S
Subjt:  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLNRAEEEFEFKHPTGGLTIPCREDVFINLTSRLQSS

A0A5D3BMR1 Auxin-responsive protein SAUR21-like3.0e-4288.66Show/hide
Query:  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLNRAEEEFEFKHPTGGLTIPCREDVFINLTSRLQSS
        MGIRLPSLL NAKQ  KMHT SSRN+CGVPKGHIAVYVGDIERKRFVVP++YLNHPSFSALL  AEEEF FKHPTGGLTIPCREDVFINLTSRLQ S
Subjt:  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLNRAEEEFEFKHPTGGLTIPCREDVFINLTSRLQSS

A0A6J1FVH4 auxin-responsive protein SAUR21-like3.0e-4289.69Show/hide
Query:  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLNRAEEEFEFKHPTGGLTIPCREDVFINLTSRLQSS
        MGIRLPSLLLNAKQ VKM T SSRN+CGVPKGHIAVYVGD ERKRFVVPI+YLNHPSFSALL  AEEEF FKHPTGGLTIPCREDVFINLTSRLQ+S
Subjt:  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLNRAEEEFEFKHPTGGLTIPCREDVFINLTSRLQSS

A0A6J1JGW3 auxin-responsive protein SAUR21-like2.3e-4289.69Show/hide
Query:  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLNRAEEEFEFKHPTGGLTIPCREDVFINLTSRLQSS
        MGIRLPSLLLNAKQ VKM T  SRN+CGVPKGHIAVYVGDIERKRFVVPI+YLNHPSFSALL  AEEEF FKHPTGGLTIPCREDVFINLTSRLQ+S
Subjt:  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLNRAEEEFEFKHPTGGLTIPCREDVFINLTSRLQSS

SwissProt top hitse value%identityAlignment
Q9FJF7 Auxin-responsive protein SAUR224.0e-2357.47Show/hide
Query:  LLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLNRAEEEFEFKHPTGGLTIPCREDVFINLTSRLQ
        LL AK+ +   TA+       PKG +AVYVG+ ++KR++VP++YLN PSF ALL+++E+EF F HP GGLTIPC ED FIN+TSRLQ
Subjt:  LLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLNRAEEEFEFKHPTGGLTIPCREDVFINLTSRLQ

Q9FJF9 Auxin-responsive protein SAUR214.0e-2358.62Show/hide
Query:  LLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLNRAEEEFEFKHPTGGLTIPCREDVFINLTSRLQ
        LL AK+ +   TAS+      PKG +AVYVG+ ++KR++VP++YL+ PSF ALL+++EEEF F HP GGLTIPC ED FIN+TSRLQ
Subjt:  LLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLNRAEEEFEFKHPTGGLTIPCREDVFINLTSRLQ

Q9FJG0 Auxin-responsive protein SAUR206.8e-2357.47Show/hide
Query:  LLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLNRAEEEFEFKHPTGGLTIPCREDVFINLTSRLQ
        LL AK+ +   T ++      PKG +AVYVG+ ++KR++VPI+YLN PSF ALL+++EEEF F HP GGLTIPC ED FIN+TSR Q
Subjt:  LLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLNRAEEEFEFKHPTGGLTIPCREDVFINLTSRLQ

Q9FJG1 Auxin-responsive protein SAUR196.8e-2357.47Show/hide
Query:  LLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLNRAEEEFEFKHPTGGLTIPCREDVFINLTSRLQ
        LL AK+ +   TA+       PKG +AVYVG+ ++KR++VP++YL+ PSF ALL+++EEEF F HP GGLTIPC ED FIN+TSRLQ
Subjt:  LLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLNRAEEEFEFKHPTGGLTIPCREDVFINLTSRLQ

Q9FK62 Auxin-responsive protein SAUR244.0e-2357.47Show/hide
Query:  LLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLNRAEEEFEFKHPTGGLTIPCREDVFINLTSRLQ
        LL AK+ +   T +       PKG +AVYVG+ ++KR++VP++YLN PSF ALL+++EEEF F HP GGLTIPC ED FIN+TSRLQ
Subjt:  LLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLNRAEEEFEFKHPTGGLTIPCREDVFINLTSRLQ

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family8.8e-2655.1Show/hide
Query:  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGD-IERKRFVVPIAYLNHPSFSALLNRAEEEFEFKHPTGGLTIPCREDVFINLTSRLQSS
        M IR+  +L ++KQ +K  + SS N   +PKGH+AVYVG+ ++++RFVVP+ YL+HP F  LL +AEEEF F HP GGLTIPC E +FI+L SRL +S
Subjt:  MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGD-IERKRFVVPIAYLNHPSFSALLNRAEEEFEFKHPTGGLTIPCREDVFINLTSRLQSS

AT4G34810.1 SAUR-like auxin-responsive protein family8.8e-2655.24Show/hide
Query:  MGIRLPSLLLNAKQAVKMHTASSRNRCG------VPKGHIAVYVG---DIERKRFVVPIAYLNHPSFSALLNRAEEEFEFKHPTGGLTIPCREDVFINL-
        MG+   ++    KQ +K+++ ++RNR        VPKGH+AVYVG   ++E+KRFVVPI++LNHPSF   L+RAEEEF F HP GGLTIPCRE+VF++L 
Subjt:  MGIRLPSLLLNAKQAVKMHTASSRNRCG------VPKGHIAVYVG---DIERKRFVVPIAYLNHPSFSALLNRAEEEFEFKHPTGGLTIPCREDVFINL-

Query:  TSRLQ
         SRLQ
Subjt:  TSRLQ

AT4G38840.1 SAUR-like auxin-responsive protein family7.5e-2553.61Show/hide
Query:  MGIRLPSLLLNAKQAVK----MHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLNRAEEEFEFKHPTGGLTIPCREDVFINLTSR
        M IR+P +L ++KQ ++    + ++SS +   VPKG++AVYVG+   KRFVVP++YL+ PSF  LL +AEEEF F HP GGLTIPC E++FI+L SR
Subjt:  MGIRLPSLLLNAKQAVK----MHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLNRAEEEFEFKHPTGGLTIPCREDVFINLTSR

AT5G18050.1 SAUR-like auxin-responsive protein family2.8e-2457.47Show/hide
Query:  LLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLNRAEEEFEFKHPTGGLTIPCREDVFINLTSRLQ
        LL AK+ +   TA+       PKG +AVYVG+ ++KR++VP++YLN PSF ALL+++E+EF F HP GGLTIPC ED FIN+TSRLQ
Subjt:  LLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLNRAEEEFEFKHPTGGLTIPCREDVFINLTSRLQ

AT5G18080.1 SAUR-like auxin-responsive protein family2.8e-2457.47Show/hide
Query:  LLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLNRAEEEFEFKHPTGGLTIPCREDVFINLTSRLQ
        LL AK+ +   T +       PKG +AVYVG+ ++KR++VP++YLN PSF ALL+++EEEF F HP GGLTIPC ED FIN+TSRLQ
Subjt:  LLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLNRAEEEFEFKHPTGGLTIPCREDVFINLTSRLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATCAGACTACCTTCACTTCTTCTCAATGCCAAGCAAGCTGTCAAAATGCATACCGCTTCTTCTAGAAACCGGTGTGGTGTTCCCAAAGGCCATATTGCAGTTTA
TGTGGGAGATATCGAAAGAAAAAGATTTGTAGTTCCAATAGCATACTTAAACCATCCTTCTTTTTCTGCTTTGCTCAACCGTGCCGAAGAAGAATTTGAATTTAAACATC
CAACTGGAGGTCTTACAATTCCTTGCAGAGAAGATGTGTTCATCAATCTCACATCCAGGCTGCAATCTTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAATCAGACTACCTTCACTTCTTCTCAATGCCAAGCAAGCTGTCAAAATGCATACCGCTTCTTCTAGAAACCGGTGTGGTGTTCCCAAAGGCCATATTGCAGTTTA
TGTGGGAGATATCGAAAGAAAAAGATTTGTAGTTCCAATAGCATACTTAAACCATCCTTCTTTTTCTGCTTTGCTCAACCGTGCCGAAGAAGAATTTGAATTTAAACATC
CAACTGGAGGTCTTACAATTCCTTGCAGAGAAGATGTGTTCATCAATCTCACATCCAGGCTGCAATCTTCATGA
Protein sequenceShow/hide protein sequence
MGIRLPSLLLNAKQAVKMHTASSRNRCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLNRAEEEFEFKHPTGGLTIPCREDVFINLTSRLQSS