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CmoCh02G003530 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G003530
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionauxin-responsive protein SAUR21-like
Genome locationCmo_Chr02:1767150..1767437
RNA-Seq ExpressionCmoCh02G003530
SyntenyCmoCh02G003530
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605030.1 Auxin-responsive protein SAUR20, partial [Cucurbita argyrosperma subsp. sororia]4.0e-49100Show/hide
Query:  MGIRLPSSLIHHAKQMLKMRNPLNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPPGGLTIPCKEDAFIDLTSRFHHA
        MGIRLPSSLIHHAKQMLKMRNPLNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPPGGLTIPCKEDAFIDLTSRFHHA
Subjt:  MGIRLPSSLIHHAKQMLKMRNPLNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPPGGLTIPCKEDAFIDLTSRFHHA

KGN61870.1 hypothetical protein Csa_006697 [Cucumis sativus]3.9e-4491.58Show/hide
Query:  MGIRLPSSLIHHAKQMLKMRNPLNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPPGGLTIPCKEDAFIDLTSRFHHA
        MGIRLPSSLIHHAKQ+LKMRN  NVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSH EEEFGFHHP GGLTIPCKEDAF+DLTSRF H+
Subjt:  MGIRLPSSLIHHAKQMLKMRNPLNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPPGGLTIPCKEDAFIDLTSRFHHA

XP_008457628.1 PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo]5.6e-4389.47Show/hide
Query:  MGIRLPSSLIHHAKQMLKMRNPLNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPPGGLTIPCKEDAFIDLTSRFHHA
        MGIRLPSSLIHHAKQ+LK+RN  NVPRGHIAVYVGEIDIQRKRFVVPIS LNHPSFKQLLSH EEEFGFHHP GGLTIPCKEDAF+DLTSRF H+
Subjt:  MGIRLPSSLIHHAKQMLKMRNPLNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPPGGLTIPCKEDAFIDLTSRFHHA

XP_022146159.1 auxin-responsive protein SAUR20-like [Momordica charantia]2.1e-4288Show/hide
Query:  MGIRLPSSLIHHAKQMLKM-----RNPLNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPPGGLTIPCKEDAFIDLTSRFHHA
        MGIRLPSSLIHHAKQ+LKM     RN LNVPRGHIAVYVGEIDIQRKRFVVPIS LNHPSFKQLLSH EEEFGFHHP GGLTIPCKEDAFIDLTSRF H+
Subjt:  MGIRLPSSLIHHAKQMLKM-----RNPLNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPPGGLTIPCKEDAFIDLTSRFHHA

XP_038901507.1 auxin-responsive protein SAUR21-like [Benincasa hispida]1.9e-4390.53Show/hide
Query:  MGIRLPSSLIHHAKQMLKMRNPLNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPPGGLTIPCKEDAFIDLTSRFHHA
        MGIRLPSSLIHHAKQ+LKM+N  NVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHP GGLTIPCKEDAF+DLTSRF  +
Subjt:  MGIRLPSSLIHHAKQMLKMRNPLNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPPGGLTIPCKEDAFIDLTSRFHHA

TrEMBL top hitse value%identityAlignment
A0A0A0LIY9 Uncharacterized protein1.9e-4491.58Show/hide
Query:  MGIRLPSSLIHHAKQMLKMRNPLNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPPGGLTIPCKEDAFIDLTSRFHHA
        MGIRLPSSLIHHAKQ+LKMRN  NVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSH EEEFGFHHP GGLTIPCKEDAF+DLTSRF H+
Subjt:  MGIRLPSSLIHHAKQMLKMRNPLNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPPGGLTIPCKEDAFIDLTSRFHHA

A0A1S3C621 auxin-responsive protein SAUR21-like2.7e-4389.47Show/hide
Query:  MGIRLPSSLIHHAKQMLKMRNPLNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPPGGLTIPCKEDAFIDLTSRFHHA
        MGIRLPSSLIHHAKQ+LK+RN  NVPRGHIAVYVGEIDIQRKRFVVPIS LNHPSFKQLLSH EEEFGFHHP GGLTIPCKEDAF+DLTSRF H+
Subjt:  MGIRLPSSLIHHAKQMLKMRNPLNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPPGGLTIPCKEDAFIDLTSRFHHA

A0A5A7TS40 Auxin-responsive protein SAUR21-like2.7e-4389.47Show/hide
Query:  MGIRLPSSLIHHAKQMLKMRNPLNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPPGGLTIPCKEDAFIDLTSRFHHA
        MGIRLPSSLIHHAKQ+LK+RN  NVPRGHIAVYVGEIDIQRKRFVVPIS LNHPSFKQLLSH EEEFGFHHP GGLTIPCKEDAF+DLTSRF H+
Subjt:  MGIRLPSSLIHHAKQMLKMRNPLNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPPGGLTIPCKEDAFIDLTSRFHHA

A0A6J1CXB8 auxin-responsive protein SAUR20-like1.0e-4288Show/hide
Query:  MGIRLPSSLIHHAKQMLKM-----RNPLNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPPGGLTIPCKEDAFIDLTSRFHHA
        MGIRLPSSLIHHAKQ+LKM     RN LNVPRGHIAVYVGEIDIQRKRFVVPIS LNHPSFKQLLSH EEEFGFHHP GGLTIPCKEDAFIDLTSRF H+
Subjt:  MGIRLPSSLIHHAKQMLKM-----RNPLNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPPGGLTIPCKEDAFIDLTSRFHHA

A0A6J1CYH2 auxin-responsive protein SAUR23-like1.9e-3377.55Show/hide
Query:  MGIRLPSSLIHHAKQMLKM-----RNPLNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPPGGLTIPCKEDAFIDLTSRFH
        MGIRL  SL+ HAK +LKM     +N L+VP+GH+AVYVGE  IQRKRFVVPIS+LNHPSF+QLLSHAEEEFGFHHP GGLTIPCKEDAFIDLTSR H
Subjt:  MGIRLPSSLIHHAKQMLKM-----RNPLNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPPGGLTIPCKEDAFIDLTSRFH

SwissProt top hitse value%identityAlignment
P33083 Auxin-induced protein 6B5.3e-2052.22Show/hide
Query:  MGIRLPSSLIHHAKQMLKMRNPLNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPPGGLTIPCKEDAFIDLTS
        MG RLP                ++V +G++AVYVGE   + +RFV+P+S+LN PSF+ LLS AEEEFG+HHP GGLTIPC ED F  +TS
Subjt:  MGIRLPSSLIHHAKQMLKMRNPLNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPPGGLTIPCKEDAFIDLTS

Q41220 Auxin-responsive protein SAUR158.1e-2158.23Show/hide
Query:  AKQMLKMRNPLNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPPGGLTIPCKEDAFIDLTSR
        AKQ+++ R   + PRG +AVYVGE D ++KR+VVP+S+LN P F+QLLS +EEEFG+ HP GGLTIPC E  F  +TS+
Subjt:  AKQMLKMRNPLNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPPGGLTIPCKEDAFIDLTSR

Q9FJF6 Auxin-responsive protein SAUR238.1e-2166.18Show/hide
Query:  PRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPPGGLTIPCKEDAFIDLTSRFH
        P+G +AVYVGE   Q+KR++VP+S+LN PSF+ LLS +EEEFGF HP GGLTIPC ED FI++TSR H
Subjt:  PRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPPGGLTIPCKEDAFIDLTSRFH

Q9FJF9 Auxin-responsive protein SAUR213.1e-2058.23Show/hide
Query:  AKQMLKMRNPLNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPPGGLTIPCKEDAFIDLTSR
        AK++L        P+G +AVYVGE   Q+KR++VP+S+L+ PSF+ LLS +EEEFGF HP GGLTIPC ED FI++TSR
Subjt:  AKQMLKMRNPLNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPPGGLTIPCKEDAFIDLTSR

Q9FJG0 Auxin-responsive protein SAUR208.1e-2168.66Show/hide
Query:  PRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPPGGLTIPCKEDAFIDLTSRF
        P+G +AVYVGE   Q+KR++VPIS+LN PSF+ LLS +EEEFGF HP GGLTIPC ED FI++TSRF
Subjt:  PRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPPGGLTIPCKEDAFIDLTSRF

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family2.8e-2455.79Show/hide
Query:  MGIRLPSSLIHHAKQMLK----MRNPLNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPPGGLTIPCKEDAFIDLTSR
        M IR+ S ++  +KQ+LK      N + +P+GH+AVYVGE+ +Q++RFVVP+++L+HP F++LL  AEEEFGF HP GGLTIPC E  FIDL SR
Subjt:  MGIRLPSSLIHHAKQMLK----MRNPLNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPPGGLTIPCKEDAFIDLTSR

AT4G34770.1 SAUR-like auxin-responsive protein family2.0e-2258.62Show/hide
Query:  RLPSSLIHHAKQMLKMRNPLNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPPGGLTIPCKEDAFIDLTS
        +L  SL      +L      NVP+GH+AVYVGE    RKRFV+PIS+LNHP F+ LL+ AEEEFGF HP GGLTIPC ED F  L S
Subjt:  RLPSSLIHHAKQMLKMRNPLNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPPGGLTIPCKEDAFIDLTS

AT4G34800.1 SAUR-like auxin-responsive protein family9.5e-2558.7Show/hide
Query:  MGIRLPSSLIHHAKQMLKMRNPLNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPPGGLTIPCKEDAFIDLTSRF
        M IRL  S + ++KQ  K ++   VP+GH+AVYVGE    +KRFVVPIS+LNHPSF+ LLS AEEEFGF+HP GGLTIPC+E+ F+ L + +
Subjt:  MGIRLPSSLIHHAKQMLKMRNPLNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPPGGLTIPCKEDAFIDLTSRF

AT4G34810.1 SAUR-like auxin-responsive protein family8.6e-2662.07Show/hide
Query:  KQMLKMRNPLN-----------VPRGHIAVYVGE-IDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPPGGLTIPCKEDAFIDL
        KQ+LK+ +  N           VP+GH+AVYVGE I++++KRFVVPISFLNHPSFK+ LS AEEEFGF+HP GGLTIPC+E+ F+DL
Subjt:  KQMLKMRNPLN-----------VPRGHIAVYVGE-IDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPPGGLTIPCKEDAFIDL

AT4G38840.1 SAUR-like auxin-responsive protein family1.8e-2352.94Show/hide
Query:  MGIRLPSSLIHHAKQMLKM---------RNPLNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPPGGLTIPCKEDAFIDLTSR
        M IR+P  ++  +KQ+L+           + L+VP+G++AVYVGE ++  KRFVVP+S+L+ PSF+ LL  AEEEFGF HP GGLTIPC E+ FIDL SR
Subjt:  MGIRLPSSLIHHAKQMLKM---------RNPLNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPPGGLTIPCKEDAFIDLTSR

Query:  FH
        F+
Subjt:  FH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATTCGTTTACCGTCGTCTTTGATTCATCATGCCAAGCAAATGCTAAAGATGCGAAACCCGTTGAATGTTCCAAGAGGTCATATTGCAGTATATGTGGGCGAGAT
CGATATTCAGAGGAAACGGTTCGTAGTTCCGATATCTTTCTTAAACCATCCGTCATTTAAACAACTTCTTAGCCATGCTGAGGAAGAGTTCGGATTCCATCATCCACCGG
GAGGTCTAACTATTCCTTGCAAAGAAGATGCGTTTATCGATCTTACTTCTAGATTTCATCATGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAATTCGTTTACCGTCGTCTTTGATTCATCATGCCAAGCAAATGCTAAAGATGCGAAACCCGTTGAATGTTCCAAGAGGTCATATTGCAGTATATGTGGGCGAGAT
CGATATTCAGAGGAAACGGTTCGTAGTTCCGATATCTTTCTTAAACCATCCGTCATTTAAACAACTTCTTAGCCATGCTGAGGAAGAGTTCGGATTCCATCATCCACCGG
GAGGTCTAACTATTCCTTGCAAAGAAGATGCGTTTATCGATCTTACTTCTAGATTTCATCATGCTTGA
Protein sequenceShow/hide protein sequence
MGIRLPSSLIHHAKQMLKMRNPLNVPRGHIAVYVGEIDIQRKRFVVPISFLNHPSFKQLLSHAEEEFGFHHPPGGLTIPCKEDAFIDLTSRFHHA