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CmoCh02G003640 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G003640
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionComplex I-B22
Genome locationCmo_Chr02:1839039..1842916
RNA-Seq ExpressionCmoCh02G003640
SyntenyCmoCh02G003640
Gene Ontology termsGO:0006120 - mitochondrial electron transport, NADH to ubiquinone (biological process)
GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsIPR008011 - Complex 1 LYR protein
IPR033034 - NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605042.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9, partial [Cucurbita argyrosperma subsp. sororia]1.8e-5998.28Show/hide
Query:  MSISSTAGYLARRAAQRERVRILYRRALKDTLTWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MSISSTAGYLARRAAQRERVRILYRRALKDTL WAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSISSTAGYLARRAAQRERVRILYRRALKDTLTWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPSGVEIIYDYGREDH
        PPSGVEIIYDYGRE+H
Subjt:  PPSGVEIIYDYGREDH

KAG7035055.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 [Cucurbita argyrosperma subsp. argyrosperma]4.7e-6099.14Show/hide
Query:  MSISSTAGYLARRAAQRERVRILYRRALKDTLTWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MSISSTAGYLARRAAQRERVRILYRRALKDTL WAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSISSTAGYLARRAAQRERVRILYRRALKDTLTWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPSGVEIIYDYGREDH
        PPSGVEIIYDYGREDH
Subjt:  PPSGVEIIYDYGREDH

XP_022948212.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9-like [Cucurbita moschata]1.2e-60100Show/hide
Query:  MSISSTAGYLARRAAQRERVRILYRRALKDTLTWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MSISSTAGYLARRAAQRERVRILYRRALKDTLTWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSISSTAGYLARRAAQRERVRILYRRALKDTLTWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPSGVEIIYDYGREDH
        PPSGVEIIYDYGREDH
Subjt:  PPSGVEIIYDYGREDH

XP_023007340.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9-like [Cucurbita maxima]2.0e-5896.55Show/hide
Query:  MSISSTAGYLARRAAQRERVRILYRRALKDTLTWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MSISSTAGYLARRAAQRERVRILYRRALK+TL WAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSISSTAGYLARRAAQRERVRILYRRALKDTLTWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPSGVEIIYDYGREDH
        PP GVEIIY+YGREDH
Subjt:  PPSGVEIIYDYGREDH

XP_023532128.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9-like [Cucurbita pepo subsp. pepo]1.2e-5895.69Show/hide
Query:  MSISSTAGYLARRAAQRERVRILYRRALKDTLTWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MSISSTAGYLARRAAQ+ERVRILYRRALKDTL WAVHRHLFYRDASDLRERFEANKNVED+DTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSISSTAGYLARRAAQRERVRILYRRALKDTLTWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPSGVEIIYDYGREDH
        PP G+EIIYDYGREDH
Subjt:  PPSGVEIIYDYGREDH

TrEMBL top hitse value%identityAlignment
A0A6J1CYA5 Complex I-B224.0e-5793.1Show/hide
Query:  MSISSTAGYLARRAAQRERVRILYRRALKDTLTWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MS SSTAGYLARRAAQ+ERVRILYRRALKDTL WAVHRHLFYRDASDLRERFEANK+VEDLDTIDKLIA GEAS+NKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSISSTAGYLARRAAQRERVRILYRRALKDTLTWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPSGVEIIYDYGREDH
        PP+G+EIIYDYGREDH
Subjt:  PPSGVEIIYDYGREDH

A0A6J1FYY7 Complex I-B224.4e-5690.52Show/hide
Query:  MSISSTAGYLARRAAQRERVRILYRRALKDTLTWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MS SSTAGYLARRAAQ+ERVRILYRRALKDTL WAVHRHLFYRDASDLRERF+ANK+VEDLD ID++IADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSISSTAGYLARRAAQRERVRILYRRALKDTLTWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPSGVEIIYDYGREDH
        PP G+EIIY+YGREDH
Subjt:  PPSGVEIIYDYGREDH

A0A6J1G8K3 Complex I-B226.0e-61100Show/hide
Query:  MSISSTAGYLARRAAQRERVRILYRRALKDTLTWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MSISSTAGYLARRAAQRERVRILYRRALKDTLTWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSISSTAGYLARRAAQRERVRILYRRALKDTLTWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPSGVEIIYDYGREDH
        PPSGVEIIYDYGREDH
Subjt:  PPSGVEIIYDYGREDH

A0A6J1J845 Complex I-B224.4e-5690.52Show/hide
Query:  MSISSTAGYLARRAAQRERVRILYRRALKDTLTWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MS SSTAGYLARRAAQ+ERVRILYRRALKDTL WAVHRHLFYRDASDLRERF+ANK+VEDLD ID++IADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSISSTAGYLARRAAQRERVRILYRRALKDTLTWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPSGVEIIYDYGREDH
        PP G+EIIY+YGREDH
Subjt:  PPSGVEIIYDYGREDH

A0A6J1L2P5 Complex I-B229.5e-5996.55Show/hide
Query:  MSISSTAGYLARRAAQRERVRILYRRALKDTLTWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MSISSTAGYLARRAAQRERVRILYRRALK+TL WAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSISSTAGYLARRAAQRERVRILYRRALKDTLTWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPSGVEIIYDYGREDH
        PP GVEIIY+YGREDH
Subjt:  PPSGVEIIYDYGREDH

SwissProt top hitse value%identityAlignment
Q02369 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 91.0e-0934.02Show/hide
Query:  MSISSTAGYLARRAAQRERVRILYRRALKDTLTWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTR
        M+  S+  YL      +++V  LY+RAL+   +W +HR  +   A  LR RF+ +KN +D+    +L+ + E  +   +HP PYI P +PGG+ + R
Subjt:  MSISSTAGYLARRAAQRERVRILYRRALKDTLTWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTR

Q0MQE8 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 98.7e-0934.02Show/hide
Query:  MSISSTAGYLARRAAQRERVRILYRRALKDTLTWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTR
        M+  ++  YL      R++V  LY+RAL+   +W V R  +   A  +R RFE +KN +D+    +L+ + E  +   +HP PYI P +PGG+ + R
Subjt:  MSISSTAGYLARRAAQRERVRILYRRALKDTLTWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTR

Q0MQE9 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 93.3e-0834.88Show/hide
Query:  RRAAQRERVRILYRRALKDTLTWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTR
        R    +++V  LY+RAL+   +W V R  +   A  +R RFE +KN +D+    +L+ + E  +   +HP PYI P +PGG+ + R
Subjt:  RRAAQRERVRILYRRALKDTLTWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTR

Q945M1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 92.4e-5180.17Show/hide
Query:  MSISSTAGYLARRAAQRERVRILYRRALKDTLTWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MS  STA Y ARRAAQ+ERVRILYRRALKDTL WAVHRH+FYRDASDLRE+F  N++VED+D IDKLIA GEA YNKWRHPDPYIVPWAPGGSKF RNPT
Subjt:  MSISSTAGYLARRAAQRERVRILYRRALKDTLTWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPSGVEIIYDYGREDH
        PP+G+EI+Y+YG ED+
Subjt:  PPSGVEIIYDYGREDH

Q9CQJ8 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 91.8e-0937.04Show/hide
Query:  RERVRILYRRALKDTLTWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTR
        +++V  LY+RAL+   +W +HR  +   A  +R RFE +KN +D+    +L+ + E  + + +HP PYI P +PGG+ F R
Subjt:  RERVRILYRRALKDTLTWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTR

Arabidopsis top hitse value%identityAlignment
AT4G34700.1 LYR family of Fe/S cluster biogenesis protein1.7e-5280.17Show/hide
Query:  MSISSTAGYLARRAAQRERVRILYRRALKDTLTWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MS  STA Y ARRAAQ+ERVRILYRRALKDTL WAVHRH+FYRDASDLRE+F  N++VED+D IDKLIA GEA YNKWRHPDPYIVPWAPGGSKF RNPT
Subjt:  MSISSTAGYLARRAAQRERVRILYRRALKDTLTWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPSGVEIIYDYGREDH
        PP+G+EI+Y+YG ED+
Subjt:  PPSGVEIIYDYGREDH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCATTTCGTCGACGGCGGGATATTTGGCTCGGCGAGCCGCCCAGAGGGAGAGGGTTCGGATTCTTTACCGGCGAGCTCTCAAAGATACTCTCACCTGGGCCGTCCA
TCGTCATCTCTTTTACCGAGATGCTTCCGATCTTCGGGAGAGATTCGAGGCAAACAAGAACGTGGAAGATCTTGACACAATAGACAAGCTGATAGCTGATGGGGAAGCTT
CCTATAATAAGTGGCGACATCCTGATCCCTATATCGTTCCTTGGGCTCCAGGGGGTTCTAAGTTTACGCGAAACCCAACTCCACCTTCTGGGGTTGAGATAATATATGAC
TATGGACGGGAAGATCACTGA
mRNA sequenceShow/hide mRNA sequence
AGTGATTCCAAAGCCATTTCTAGAGAGAGAGAGGAGAGAGAGAGGAGAGAGAGATGAGCATTTCGTCGACGGCGGGATATTTGGCTCGGCGAGCCGCCCAGAGGGAGAGG
GTTCGGATTCTTTACCGGCGAGCTCTCAAAGATACTCTCACCTGGGCCGTCCATCGTCATCTCTTTTACCGAGATGCTTCCGATCTTCGGGAGAGATTCGAGGCAAACAA
GAACGTGGAAGATCTTGACACAATAGACAAGCTGATAGCTGATGGGGAAGCTTCCTATAATAAGTGGCGACATCCTGATCCCTATATCGTTCCTTGGGCTCCAGGGGGTT
CTAAGTTTACGCGAAACCCAACTCCACCTTCTGGGGTTGAGATAATATATGACTATGGACGGGAAGATCACTGAAATCTTCATTTTCTGGTAATGAATAAAGGTTTTTAA
ATGGTTTGTTGCTTCGTCTGAGTTGATGATGATAAAAGGAGCTCTTTGATGTGTAAACTTTGAATGAACACAAATCATAGTTATTCCTTGTTGATTTGCTTTCTACTTTT
TCTTAGATATGCAAATTTGACATAGAAAAAACACCATTGGAACGGTGAATGATGTTGCAACTCTTGGTTAATTTAAGCGTTCGTTCATCATTTGCATGACATGTCTGGAG
CTATCCCTTGTTCATTGTTGCACTGATAAAACCGGCCTTTCATTTTGACTTAACGAAACGACTTCGTTATATGTTGATGAGGGCTTCTTTCTGTTCTTGGGTTTTTTTTT
TCCCTTTTG
Protein sequenceShow/hide protein sequence
MSISSTAGYLARRAAQRERVRILYRRALKDTLTWAVHRHLFYRDASDLRERFEANKNVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPTPPSGVEIIYD
YGREDH