CuGenDBv2

Gene ID	CmoCh02G003700
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Squalene synthase
Genome location	Cmo_Chr02:1874006..1879707
RNA-Seq Expression	CmoCh02G003700
Synteny	CmoCh02G003700
Gene Ontology terms	GO:0008610 - lipid biosynthetic process (biological process) GO:0045338 - farnesyl diphosphate metabolic process (biological process) GO:0005789 - endoplasmic reticulum membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0004310 - farnesyl-diphosphate farnesyltransferase activity (molecular function) GO:0051996 - squalene synthase activity (molecular function)
InterPro domains	IPR002060 - Squalene/phytoene synthase IPR006449 - Squalene synthase-like IPR008949 - Isoprenoid synthase domain superfamily IPR019845 - Squalene/phytoene synthase, conserved site IPR033904 - Trans-isoprenyl diphosphate synthases, head-to-head IPR044844 - Trans-isoprenyl diphosphate synthases, eukaryotic-type

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

ARE29886.1 squalene synthase [Cucurbita moschata]

3.4e-236

99.51

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Query:  MGSLRAILSHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLTPELRNAVCIFYLVLRALDTVEDDTSIETDIKVPILNAFHRH
        MGSL AILSHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLTPELRNAVCIFYLVLRALDTVEDDTSIETDIKVPILNAFHRH
Subjt:  MGSLRAILSHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLTPELRNAVCIFYLVLRALDTVEDDTSIETDIKVPILNAFHRH

Query:  IYNPDWHFSCGTKHYKVLMDEFHHVSTAFLELAKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS
        IYNPDWHFSCGTKHYKVLMDEFHHVSTAFLELAKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS
Subjt:  IYNPDWHFSCGTKHYKVLMDEFHHVSTAFLELAKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWNKYADKLEDFKYEKNSVKAVQCLNDLVTNALNHVEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWNKYADKLEDFKYEKNSVKAVQCLNDLVTNALNHVEDCLIYM NLRDLSIFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWNKYADKLEDFKYEKNSVKAVQCLNDLVTNALNHVEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKIIDRTKTVADVYGAFFDFSVMLKAKVNNNDPNAAKTLSRIEAIQKTCKESGLLNKRNLYVVRSEPMFNPAVIVILFSLIC
        YNNVEVFRGVVKMRRGLTAKIIDRTKTVADVYGAFFDFSVMLKAKVNNNDPNAAKTLSRIEAIQKTCKESGLLNKRNLYVVRSEPMFNPAVIVILFSLIC
Subjt:  YNNVEVFRGVVKMRRGLTAKIIDRTKTVADVYGAFFDFSVMLKAKVNNNDPNAAKTLSRIEAIQKTCKESGLLNKRNLYVVRSEPMFNPAVIVILFSLIC

Query:  IILAYLSARQ
        IILAYLSARQ
Subjt:  IILAYLSARQ

KAG6605048.1 Squalene synthase 2, partial [Cucurbita argyrosperma subsp. sororia]

4.1e-234

100

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Query:  MGSLRAILSHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLTPELRNAVCIFYLVLRALDTVEDDTSIETDIKVPILNAFHRH
        MGSLRAILSHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLTPELRNAVCIFYLVLRALDTVEDDTSIETDIKVPILNAFHRH
Subjt:  MGSLRAILSHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLTPELRNAVCIFYLVLRALDTVEDDTSIETDIKVPILNAFHRH

Query:  IYNPDWHFSCGTKHYKVLMDEFHHVSTAFLELAKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS
        IYNPDWHFSCGTKHYKVLMDEFHHVSTAFLELAKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS
Subjt:  IYNPDWHFSCGTKHYKVLMDEFHHVSTAFLELAKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWNKYADKLEDFKYEKNSVKAVQCLNDLVTNALNHVEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWNKYADKLEDFKYEKNSVKAVQCLNDLVTNALNHVEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWNKYADKLEDFKYEKNSVKAVQCLNDLVTNALNHVEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKIIDRTKTVADVYGAFFDFSVMLKAKVNNNDPNAAKTLSRIEAIQKTCKESGLLNKRNLYVVRSEPMFNPAVIVILFSLIC
        YNNVEVFRGVVKMRRGLTAKIIDRTKTVADVYGAFFDFSVMLKAKVNNNDPNAAKTLSRIEAIQKTCKESGLLNKRNLYVVRSEPMFNPAVIVILFSLIC
Subjt:  YNNVEVFRGVVKMRRGLTAKIIDRTKTVADVYGAFFDFSVMLKAKVNNNDPNAAKTLSRIEAIQKTCKESGLLNKRNLYVVRSEPMFNPAVIVILFSLIC

Query:  IILA
        IILA
Subjt:  IILA

XP_022947243.1 squalene synthase-like [Cucurbita moschata]

1.4e-237

100

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Query:  MGSLRAILSHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLTPELRNAVCIFYLVLRALDTVEDDTSIETDIKVPILNAFHRH
        MGSLRAILSHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLTPELRNAVCIFYLVLRALDTVEDDTSIETDIKVPILNAFHRH
Subjt:  MGSLRAILSHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLTPELRNAVCIFYLVLRALDTVEDDTSIETDIKVPILNAFHRH

Query:  IYNPDWHFSCGTKHYKVLMDEFHHVSTAFLELAKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS
        IYNPDWHFSCGTKHYKVLMDEFHHVSTAFLELAKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS
Subjt:  IYNPDWHFSCGTKHYKVLMDEFHHVSTAFLELAKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWNKYADKLEDFKYEKNSVKAVQCLNDLVTNALNHVEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWNKYADKLEDFKYEKNSVKAVQCLNDLVTNALNHVEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWNKYADKLEDFKYEKNSVKAVQCLNDLVTNALNHVEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKIIDRTKTVADVYGAFFDFSVMLKAKVNNNDPNAAKTLSRIEAIQKTCKESGLLNKRNLYVVRSEPMFNPAVIVILFSLIC
        YNNVEVFRGVVKMRRGLTAKIIDRTKTVADVYGAFFDFSVMLKAKVNNNDPNAAKTLSRIEAIQKTCKESGLLNKRNLYVVRSEPMFNPAVIVILFSLIC
Subjt:  YNNVEVFRGVVKMRRGLTAKIIDRTKTVADVYGAFFDFSVMLKAKVNNNDPNAAKTLSRIEAIQKTCKESGLLNKRNLYVVRSEPMFNPAVIVILFSLIC

Query:  IILAYLSARQ
        IILAYLSARQ
Subjt:  IILAYLSARQ

XP_023007304.1 squalene synthase-like [Cucurbita maxima]

2.6e-236

99.27

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Query:  MGSLRAILSHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLTPELRNAVCIFYLVLRALDTVEDDTSIETDIKVPILNAFHRH
        MGSLRAILSHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLTPELRNAVCIFYLVLRALDTVEDDTSIETDIKVPILNAFHRH
Subjt:  MGSLRAILSHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLTPELRNAVCIFYLVLRALDTVEDDTSIETDIKVPILNAFHRH

Query:  IYNPDWHFSCGTKHYKVLMDEFHHVSTAFLELAKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS
        IYNPDWHFSCGTKHYKVLMDEFHHVSTAFLELAKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS
Subjt:  IYNPDWHFSCGTKHYKVLMDEFHHVSTAFLELAKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWNKYADKLEDFKYEKNSVKAVQCLNDLVTNALNHVEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWNKYADKLEDFKYEKNSVKAVQCLNDLVTNALNHVEDCL YMSNLRDLSIFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWNKYADKLEDFKYEKNSVKAVQCLNDLVTNALNHVEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKIIDRTKTVADVYGAFFDFSVMLKAKVNNNDPNAAKTLSRIEAIQKTCKESGLLNKRNLYVVRSEPMFNPAVIVILFSLIC
        YNNVEVFRGVVK+RRGLTAKIIDRTKTVADVYGAFFDFSVMLKAKVNNNDPNAAKTLSRIEAIQKTCKESGLLNKRNLYVVRSEPM+NPAVIVILFSLIC
Subjt:  YNNVEVFRGVVKMRRGLTAKIIDRTKTVADVYGAFFDFSVMLKAKVNNNDPNAAKTLSRIEAIQKTCKESGLLNKRNLYVVRSEPMFNPAVIVILFSLIC

Query:  IILAYLSARQ
        IILAYLSARQ
Subjt:  IILAYLSARQ

XP_023534141.1 squalene synthase-like [Cucurbita pepo subsp. pepo]

7.6e-236

99.51

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Query:  MGSLRAILSHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLTPELRNAVCIFYLVLRALDTVEDDTSIETDIKVPILNAFHRH
        MGSLRAILSHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLTPELRNAVCIFYLVLRALDTVEDDTSIETDIKVPILNAF RH
Subjt:  MGSLRAILSHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLTPELRNAVCIFYLVLRALDTVEDDTSIETDIKVPILNAFHRH

Query:  IYNPDWHFSCGTKHYKVLMDEFHHVSTAFLELAKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS
        IYNPDWHFSCGTKHYKVLMDEFHHVSTAFLELAKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS
Subjt:  IYNPDWHFSCGTKHYKVLMDEFHHVSTAFLELAKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWNKYADKLEDFKYEKNSVKAVQCLNDLVTNALNHVEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWNKYADKLEDFKYEKNSVKAVQCLNDLVTNALNHVEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWNKYADKLEDFKYEKNSVKAVQCLNDLVTNALNHVEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKIIDRTKTVADVYGAFFDFSVMLKAKVNNNDPNAAKTLSRIEAIQKTCKESGLLNKRNLYVVRSEPMFNPAVIVILFSLIC
        YNNVEVFRGVVKMRRGLTAKIIDRTKTVADVYGAFFDFSVMLKAKVNNNDPNAAKTLSRIEAIQKTCKESGLLNKR+LYVVRSEPMFNPAVIVILFSLIC
Subjt:  YNNVEVFRGVVKMRRGLTAKIIDRTKTVADVYGAFFDFSVMLKAKVNNNDPNAAKTLSRIEAIQKTCKESGLLNKRNLYVVRSEPMFNPAVIVILFSLIC

Query:  IILAYLSARQ
        IILAYLSARQ
Subjt:  IILAYLSARQ

TrEMBL top hits

e value

%identity

Alignment

A0A2R2WEV4 Squalene synthase

1.7e-225

95.12

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Query:  MGSLRAILSHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLTPELRNAVCIFYLVLRALDTVEDDTSIETDIKVPILNAFHRH
        MGSL AIL HPDDFYPLLKLKMAARHAEKQIP EPHWGFCYSMLHKVSRSFALVIQQLTPELRNAVCIFYLVLRALDTVEDDTSI+TDIKVPIL AFH H
Subjt:  MGSLRAILSHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLTPELRNAVCIFYLVLRALDTVEDDTSIETDIKVPILNAFHRH

Query:  IYNPDWHFSCGTKHYKVLMDEFHHVSTAFLELAKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS
        IYN DWHFSCGTK YKVLMDEFHHVSTAFLEL KGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLA DSLSNS
Subjt:  IYNPDWHFSCGTKHYKVLMDEFHHVSTAFLELAKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWNKYADKLEDFKYEKNSVKAVQCLNDLVTNALNHVEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIW+KYADKLEDFKYE+NSVKAVQCLNDLVTNALNHVEDCL YMSNLRDLSIFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWNKYADKLEDFKYEKNSVKAVQCLNDLVTNALNHVEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKIIDRTKTVADVYGAFFDFSVMLKAKVNNNDPNAAKTLSRIEAIQKTCKESGLLNKRNLYVVRSEPMFNPAVIVILFSLIC
        YNNVEVFRGVVKMRRGLTAKIIDRTKT+ADVYG+FFDFSVMLKAKVN+N PNAAKTLSRIEAIQKTCKESGLLNKR LYVVRSEPM+NPAVIVILFSLIC
Subjt:  YNNVEVFRGVVKMRRGLTAKIIDRTKTVADVYGAFFDFSVMLKAKVNNNDPNAAKTLSRIEAIQKTCKESGLLNKRNLYVVRSEPMFNPAVIVILFSLIC

Query:  IILAYLSARQ
        IILAYLSA+Q
Subjt:  IILAYLSARQ

A0A2R2WEW6 Squalene synthase

6.5e-225

94.39

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Query:  MGSLRAILSHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLTPELRNAVCIFYLVLRALDTVEDDTSIETDIKVPILNAFHRH
        MGSL AIL HPDDFYPLLKLKMAARHAEKQIPPEPHWGFCY+MLHKVSRSFALVIQQL PELRNAVCIFYLVLRALDTVEDDTSI+TDIKVPILNAFH H
Subjt:  MGSLRAILSHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLTPELRNAVCIFYLVLRALDTVEDDTSIETDIKVPILNAFHRH

Query:  IYNPDWHFSCGTKHYKVLMDEFHHVSTAFLELAKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS
        IYN DWHFSCGTK YKVLMDEFHHVSTAFLEL KGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLA DSLSNS
Subjt:  IYNPDWHFSCGTKHYKVLMDEFHHVSTAFLELAKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWNKYADKLEDFKYEKNSVKAVQCLNDLVTNALNHVEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIW+KYADKLEDFKYEKNSVKAVQCLNDLVTNALNHVEDCL YMSNLRDLSIFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWNKYADKLEDFKYEKNSVKAVQCLNDLVTNALNHVEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKIIDRTKTVADVYGAFFDFSVMLKAKVNNNDPNAAKTLSRIEAIQKTCKESGLLNKRNLYVVRSEPMFNPAVIVILFSLIC
        YNNV+VFRGVVKMRRGLTAK+IDRTKT+ADVYGAFFDFSVMLKAKVNN+DPNA+KTLSRIEAIQKTCK+SGLLNKR LYVV SEPM+NPAVIVILFSLIC
Subjt:  YNNVEVFRGVVKMRRGLTAKIIDRTKTVADVYGAFFDFSVMLKAKVNNNDPNAAKTLSRIEAIQKTCKESGLLNKRNLYVVRSEPMFNPAVIVILFSLIC

Query:  IILAYLSARQ
        IILAYLSA++
Subjt:  IILAYLSARQ

A0A2R2WG76 Squalene synthase

1.6e-236

99.51

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Query:  MGSLRAILSHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLTPELRNAVCIFYLVLRALDTVEDDTSIETDIKVPILNAFHRH
        MGSL AILSHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLTPELRNAVCIFYLVLRALDTVEDDTSIETDIKVPILNAFHRH
Subjt:  MGSLRAILSHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLTPELRNAVCIFYLVLRALDTVEDDTSIETDIKVPILNAFHRH

Query:  IYNPDWHFSCGTKHYKVLMDEFHHVSTAFLELAKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS
        IYNPDWHFSCGTKHYKVLMDEFHHVSTAFLELAKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS
Subjt:  IYNPDWHFSCGTKHYKVLMDEFHHVSTAFLELAKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWNKYADKLEDFKYEKNSVKAVQCLNDLVTNALNHVEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWNKYADKLEDFKYEKNSVKAVQCLNDLVTNALNHVEDCLIYM NLRDLSIFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWNKYADKLEDFKYEKNSVKAVQCLNDLVTNALNHVEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKIIDRTKTVADVYGAFFDFSVMLKAKVNNNDPNAAKTLSRIEAIQKTCKESGLLNKRNLYVVRSEPMFNPAVIVILFSLIC
        YNNVEVFRGVVKMRRGLTAKIIDRTKTVADVYGAFFDFSVMLKAKVNNNDPNAAKTLSRIEAIQKTCKESGLLNKRNLYVVRSEPMFNPAVIVILFSLIC
Subjt:  YNNVEVFRGVVKMRRGLTAKIIDRTKTVADVYGAFFDFSVMLKAKVNNNDPNAAKTLSRIEAIQKTCKESGLLNKRNLYVVRSEPMFNPAVIVILFSLIC

Query:  IILAYLSARQ
        IILAYLSARQ
Subjt:  IILAYLSARQ

A0A6J1G684 Squalene synthase

6.7e-238

100

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Query:  MGSLRAILSHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLTPELRNAVCIFYLVLRALDTVEDDTSIETDIKVPILNAFHRH
        MGSLRAILSHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLTPELRNAVCIFYLVLRALDTVEDDTSIETDIKVPILNAFHRH
Subjt:  MGSLRAILSHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLTPELRNAVCIFYLVLRALDTVEDDTSIETDIKVPILNAFHRH

Query:  IYNPDWHFSCGTKHYKVLMDEFHHVSTAFLELAKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS
        IYNPDWHFSCGTKHYKVLMDEFHHVSTAFLELAKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS
Subjt:  IYNPDWHFSCGTKHYKVLMDEFHHVSTAFLELAKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWNKYADKLEDFKYEKNSVKAVQCLNDLVTNALNHVEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWNKYADKLEDFKYEKNSVKAVQCLNDLVTNALNHVEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWNKYADKLEDFKYEKNSVKAVQCLNDLVTNALNHVEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKIIDRTKTVADVYGAFFDFSVMLKAKVNNNDPNAAKTLSRIEAIQKTCKESGLLNKRNLYVVRSEPMFNPAVIVILFSLIC
        YNNVEVFRGVVKMRRGLTAKIIDRTKTVADVYGAFFDFSVMLKAKVNNNDPNAAKTLSRIEAIQKTCKESGLLNKRNLYVVRSEPMFNPAVIVILFSLIC
Subjt:  YNNVEVFRGVVKMRRGLTAKIIDRTKTVADVYGAFFDFSVMLKAKVNNNDPNAAKTLSRIEAIQKTCKESGLLNKRNLYVVRSEPMFNPAVIVILFSLIC

Query:  IILAYLSARQ
        IILAYLSARQ
Subjt:  IILAYLSARQ

A0A6J1L4K6 Squalene synthase

1.3e-236

99.27

Show/hide

Query:  MGSLRAILSHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLTPELRNAVCIFYLVLRALDTVEDDTSIETDIKVPILNAFHRH
        MGSLRAILSHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLTPELRNAVCIFYLVLRALDTVEDDTSIETDIKVPILNAFHRH
Subjt:  MGSLRAILSHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLTPELRNAVCIFYLVLRALDTVEDDTSIETDIKVPILNAFHRH

Query:  IYNPDWHFSCGTKHYKVLMDEFHHVSTAFLELAKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS
        IYNPDWHFSCGTKHYKVLMDEFHHVSTAFLELAKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS
Subjt:  IYNPDWHFSCGTKHYKVLMDEFHHVSTAFLELAKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWNKYADKLEDFKYEKNSVKAVQCLNDLVTNALNHVEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWNKYADKLEDFKYEKNSVKAVQCLNDLVTNALNHVEDCL YMSNLRDLSIFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWNKYADKLEDFKYEKNSVKAVQCLNDLVTNALNHVEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKIIDRTKTVADVYGAFFDFSVMLKAKVNNNDPNAAKTLSRIEAIQKTCKESGLLNKRNLYVVRSEPMFNPAVIVILFSLIC
        YNNVEVFRGVVK+RRGLTAKIIDRTKTVADVYGAFFDFSVMLKAKVNNNDPNAAKTLSRIEAIQKTCKESGLLNKRNLYVVRSEPM+NPAVIVILFSLIC
Subjt:  YNNVEVFRGVVKMRRGLTAKIIDRTKTVADVYGAFFDFSVMLKAKVNNNDPNAAKTLSRIEAIQKTCKESGLLNKRNLYVVRSEPMFNPAVIVILFSLIC

Query:  IILAYLSARQ
        IILAYLSARQ
Subjt:  IILAYLSARQ

SwissProt top hits

e value

%identity

Alignment

A0A1P7Y0D0 Squalene synthase 13

6.5e-198

80.19

Show/hide

Query:  MGSLRAILSHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLTPELRNAVCIFYLVLRALDTVEDDTSIETDIKVPILNAFHRH
        MGSL AIL HPDDFYPLLKLK+AARHAEKQIP EPHW FCYSMLHKVSRSF LVIQQL P+LR+AVCIFYLVLRALDTVEDDTSI T++KVPI+ AFH H
Subjt:  MGSLRAILSHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLTPELRNAVCIFYLVLRALDTVEDDTSIETDIKVPILNAFHRH

Query:  IYNPDWHFSCGTKHYKVLMDEFHHVSTAFLELAKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS
        IY+ DWHFSCGTK YKVLMDEFHHVS AFL+L   Y+EAIEDIT RMGAGMAKFICKEVET+DDYDEYCHYVAGLVGLGLSKLFHAS  EDLA+DSLSNS
Subjt:  IYNPDWHFSCGTKHYKVLMDEFHHVSTAFLELAKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWNKYADKLEDFKYEKNSVKAVQCLNDLVTNALNHVEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKSRMFWPR+IW+KY DKLED KYE+NS KAVQCLND+VT+AL H EDCL YMS+LR  +IFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWNKYADKLEDFKYEKNSVKAVQCLNDLVTNALNHVEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKIIDRTKTVADVYGAFFDFSVMLKAKVNNNDPNAAKTLSRIEAIQKTCKESGLLNKRNLYVVRSEPMFNPAVIVILFSLIC
        +NN +VFRGVVKMRRGLTAK+ID+TKT++DVYGAFFDFS +LK+KV+NNDPNA KTLSR+EAIQKTCKESG L+KR  Y++ SE   N A+I I+F ++ 
Subjt:  YNNVEVFRGVVKMRRGLTAKIIDRTKTVADVYGAFFDFSVMLKAKVNNNDPNAAKTLSRIEAIQKTCKESGLLNKRNLYVVRSEPMFNPAVIVILFSLIC

Query:  IILAYLSARQSLNR
        I+ AYLS+   LN+
Subjt:  IILAYLSARQSLNR

C9E894 Squalene synthase 2

1.3e-198

81.91

Show/hide

Query:  MGSLRAILSHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLTPELRNAVCIFYLVLRALDTVEDDTSIETDIKVPILNAFHRH
        MGSL AIL HPDDFYPLLKLK+AARHAEKQIP EPHW FCYSMLHKVSRSF LVIQQL P+LR+AVCIFYLVLRALDTVEDDTSI T++KVPIL AFHRH
Subjt:  MGSLRAILSHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLTPELRNAVCIFYLVLRALDTVEDDTSIETDIKVPILNAFHRH

Query:  IYNPDWHFSCGTKHYKVLMDEFHHVSTAFLELAKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS
        IY+ DWHFSCGTK YKVLMDEFHHVS AFL+L  GY+EAIEDIT RMGAGMAKFICKEVET+DDYDEYCHYVAGLVGLGLSKLFHAS  EDLA+DSLSNS
Subjt:  IYNPDWHFSCGTKHYKVLMDEFHHVSTAFLELAKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWNKYADKLEDFKYEKNSVKAVQCLNDLVTNALNHVEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKSRMFWPR+IW+KY DKLED KYE+NS KAVQCLND+VTNAL HVEDCL YMS+LRD +IFRFCAIPQIM+IGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWNKYADKLEDFKYEKNSVKAVQCLNDLVTNALNHVEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKIIDRTKTVADVYGAFFDFSVMLKAKVNNNDPNAAKTLSRIEAIQKTCKESG-LLNKRNLYVVRSEPMFNPAVIVILFSLI
        YNN++VFRGVVKMRRGLTAK+IDRT T++DVYGAFFDFS MLK+KV+NNDPNA KTLSR+EAIQK CK SG L  KR  Y++ +E  +N  +IVILF ++
Subjt:  YNNVEVFRGVVKMRRGLTAKIIDRTKTVADVYGAFFDFSVMLKAKVNNNDPNAAKTLSRIEAIQKTCKESG-LLNKRNLYVVRSEPMFNPAVIVILFSLI

Query:  CIILAYLSA
         I+ AYLS+
Subjt:  CIILAYLSA

D0VFU8 Squalene synthase

2.6e-199

80.29

Show/hide

Query:  MGSLRAILSHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLTPELRNAVCIFYLVLRALDTVEDDTSIETDIKVPILNAFHRH
        MG+LRAIL +PDD YPL+KLK+AARHAEKQIPPEPHWGFCY ML KVSRSFALVIQQL  ELR+AVCIFYLVLRALDTVEDDTSI TD+KVPIL +FH+H
Subjt:  MGSLRAILSHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLTPELRNAVCIFYLVLRALDTVEDDTSIETDIKVPILNAFHRH

Query:  IYNPDWHFSCGTKHYKVLMDEFHHVSTAFLELAKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS
        +Y+ +WHF+CGTK YKVLMD+FHHVSTAFLEL K YQ+AIEDIT RMGAGMAKFICKEVET DDYDEYCHYVAGLVGLGLSKLFHAS  EDLASDSLSNS
Subjt:  IYNPDWHFSCGTKHYKVLMDEFHHVSTAFLELAKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWNKYADKLEDFKYEKNSVKAVQCLNDLVTNALNHVEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINE+PK RMFWPREIW+KY +KLED KYE+NSVKAVQCLND+VTNAL+HVEDCL YM NL D +IFRFCAIPQ+MAIGTLA+C
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWNKYADKLEDFKYEKNSVKAVQCLNDLVTNALNHVEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKIIDRTKTVADVYGAFFDFSVMLKAKVNNNDPNAAKTLSRIEAIQKTCKESGLLNKRNLYVVRSEPMFNPAVIVILFSLIC
        Y+N+EVFRGVVKMRRGLTAK+IDRTKT+ADVYGAFFDFS MLK+KVNNNDPNA KTL R++AI KTC++SG LNKR  Y++R+EP ++P +IV++F ++ 
Subjt:  YNNVEVFRGVVKMRRGLTAKIIDRTKTVADVYGAFFDFSVMLKAKVNNNDPNAAKTLSRIEAIQKTCKESGLLNKRNLYVVRSEPMFNPAVIVILFSLIC

Query:  IILAYLSARQS
        IILA L   +S
Subjt:  IILAYLSARQS

O48666 Squalene synthase 1

1.8e-200

81.16

Show/hide

Query:  MGSLRAILSHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLTPELRNAVCIFYLVLRALDTVEDDTSIETDIKVPILNAFHRH
        MGSL AIL HP+DFYPLLKLK AARHAEKQIPPEPHW FCYSMLHKVSRSF LVIQQL P+LR+AVCIFYLVLRALDTVEDDTSI T++KVPIL AFHRH
Subjt:  MGSLRAILSHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLTPELRNAVCIFYLVLRALDTVEDDTSIETDIKVPILNAFHRH

Query:  IYNPDWHFSCGTKHYKVLMDEFHHVSTAFLELAKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS
        IY+ DWHFSCGTK YKVLMDEFHHVS AFLEL  GYQEAIEDIT RMGAGMAKFICKEVET++DYDEYCHYVAGLVGLGLSKLFHAS  EDLA+DSLSNS
Subjt:  IYNPDWHFSCGTKHYKVLMDEFHHVSTAFLELAKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWNKYADKLEDFKYEKNSVKAVQCLNDLVTNALNHVEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKSRMFWPR+IW+KY DKLED KYE+NS KAVQCLND+VT+AL H EDCL YMS+LR  +IFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWNKYADKLEDFKYEKNSVKAVQCLNDLVTNALNHVEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKIIDRTKTVADVYGAFFDFSVMLKAKVNNNDPNAAKTLSRIEAIQKTCKESGLLNKRNLYVVRSEPMFNPAVIVILFSLIC
        +NN +VFRGVVKMRRGLTAK+ID+TKT++DVYGAFFDFS +LK+KV+NNDPNA KTLSR+EAIQKTCKESG L+KR  Y++ SE   N A+I I+F ++ 
Subjt:  YNNVEVFRGVVKMRRGLTAKIIDRTKTVADVYGAFFDFSVMLKAKVNNNDPNAAKTLSRIEAIQKTCKESGLLNKRNLYVVRSEPMFNPAVIVILFSLIC

Query:  IILAYLSARQSLNR
        I+ AYLS+   LN+
Subjt:  IILAYLSARQSLNR

P53800 Squalene synthase

3.1e-200

80.78

Show/hide

Query:  MGSLRAILSHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLTPELRNAVCIFYLVLRALDTVEDDTSIETDIKVPILNAFHRH
        MGSLRAIL +P+D YPL+KLK+AARHAEKQIPP P+WGFCYSMLHKVSRSFALVIQQL  ELR+AVCIFYLVLRALDTVEDDTSI TD+KVPIL +FH+H
Subjt:  MGSLRAILSHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLTPELRNAVCIFYLVLRALDTVEDDTSIETDIKVPILNAFHRH

Query:  IYNPDWHFSCGTKHYKVLMDEFHHVSTAFLELAKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS
        +Y+ +WHFSCGTK YKVLMD+FHHVSTAFLEL K YQ+AIEDIT RMGAGMAKFICKEVET DDYDEYCHYVAGLVGLGLSKLFHAS+ EDLASDSLSNS
Subjt:  IYNPDWHFSCGTKHYKVLMDEFHHVSTAFLELAKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWNKYADKLEDFKYEKNSVKAVQCLNDLVTNALNHVEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINE+PK RMFWPREIW+KY +KLE+ KYE NS KAVQCLND+VTNAL HVEDCL YMS LRD SIFRFCAIPQ+MAIGTLA+C
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWNKYADKLEDFKYEKNSVKAVQCLNDLVTNALNHVEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKIIDRTKTVADVYGAFFDFSVMLKAKVNNNDPNAAKTLSRIEAIQKTCKESGLLNKRNLYVVRSEPMFNPAVIVILFSLIC
        Y+N+EVFRGVVKMRRGLTAK+IDRT+T+ADVYGAFFDFS MLK+KVNNNDPNA KTL R+E I KTC++SG LNKR  Y++RSEP ++P +IV++F ++ 
Subjt:  YNNVEVFRGVVKMRRGLTAKIIDRTKTVADVYGAFFDFSVMLKAKVNNNDPNAAKTLSRIEAIQKTCKESGLLNKRNLYVVRSEPMFNPAVIVILFSLIC

Query:  IILAYLSARQS
        IILA LS  +S
Subjt:  IILAYLSARQS

Arabidopsis top hits

e value

%identity

Alignment

AT4G34640.1 squalene synthase 1

6.5e-185

76.34

Show/hide

Query:  MGSLRAILSHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLTPELRNAVCIFYLVLRALDTVEDDTSIETDIKVPILNAFHRH
        MGSL  +L +PDD YPLLK+K A   AEKQIPPEPHWGFCYSMLHKVSRSF+LVIQQL  ELRNAVC+FYLVLRALDTVEDDTSI TD KVPIL AFHRH
Subjt:  MGSLRAILSHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLTPELRNAVCIFYLVLRALDTVEDDTSIETDIKVPILNAFHRH

Query:  IYNPDWHFSCGTKHYKVLMDEFHHVSTAFLELAKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASD--SLS
        IY+ DWH+SCGTK YK+LMD+FHHVS AFLEL KGYQEAIE+IT+RMGAGMAKFIC+EVETVDDYDEYCHYVAGLVGLGLSKLF A+  E L  D  ++S
Subjt:  IYNPDWHFSCGTKHYKVLMDEFHHVSTAFLELAKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASD--SLS

Query:  NSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWNKYADKLEDFKYEKNSVKAVQCLNDLVTNALNHVEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLA
        NSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIW KYADKLED KYE+N+ K+VQCLN++VTNAL H+EDCL YM +LRD SIFRFCAIPQIMAIGTLA
Subjt:  NSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWNKYADKLEDFKYEKNSVKAVQCLNDLVTNALNHVEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLA

Query:  LCYNNVEVFRGVVKMRRGLTAKIIDRTKTVADVYGAFFDFSVMLKAKVNNNDPNAAKTLSRIEAIQKTCKESGLLNKRNLYVVRSEPMFNPAVIVILFSL
        LCYNN +VFRGVVK+RRGLTAK+IDRTKT+ADVYGAF+DFS MLK KV+ NDPNA+KTL+R+EA+QK C+++G+L  R  Y V  +   N   I+++  L
Subjt:  LCYNNVEVFRGVVKMRRGLTAKIIDRTKTVADVYGAFFDFSVMLKAKVNNNDPNAAKTLSRIEAIQKTCKESGLLNKRNLYVVRSEPMFNPAVIVILFSL

Query:  ICIILAYLSA
        + I+ AYL A
Subjt:  ICIILAYLSA

AT4G34650.1 squalene synthase 2

1.4e-176

72.88

Show/hide

Query:  MGSLRAILSHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLTPELRNAVCIFYLVLRALDTVEDDTSIETDIKVPILNAFHRH
        MGSL  IL HPD+ YPLLKLK+A   A+KQIP EPH  FCYS+LHKVS+SF+LVIQQL  ELRNAVC+FYL+LRALDTVEDDTS+  +IKVPIL AFHRH
Subjt:  MGSLRAILSHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLTPELRNAVCIFYLVLRALDTVEDDTSIETDIKVPILNAFHRH

Query:  IYNPDWHFSCGTKHYKVLMDEFHHVSTAFLELAKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASD--SLS
        IY+ DWHFSCGTK YK+LMD+FHHVS AFL+L KGYQEAIEDITKRMGAGMAKFICKEVET+DDYDEYCHY AGLVGLGLSK+F AS+LE L  D   +S
Subjt:  IYNPDWHFSCGTKHYKVLMDEFHHVSTAFLELAKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASD--SLS

Query:  NSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWNKYADKLEDFKYEKNSVKAVQCLNDLVTNALNHVEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLA
        NS GLFLQKTNII+DYLEDINE PKSRMFWPREIW KY DKLEDFK E+ + KAVQCLN++VTNALNHVEDCL  +++LRD +IF+ CAIPQI+AIGTLA
Subjt:  NSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWNKYADKLEDFKYEKNSVKAVQCLNDLVTNALNHVEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLA

Query:  LCYNNVEVFRGVVKMRRGLTAKIIDRTKTVADVYGAFFDFSVMLKAKVNNNDPNAAKTLSRIEAIQKTCKESGLLNKRNLYVVRSEPMFNPAVIVILF-S
        LCYNNV+VFRGVV++RRGL AK+IDRTKT+ DVYGAF+DFS ML+ KV+NNDPNA KTL+R+E I+K CKE+G L+KR  YV  ++   + A+ V++F  
Subjt:  LCYNNVEVFRGVVKMRRGLTAKIIDRTKTVADVYGAFFDFSVMLKAKVNNNDPNAAKTLSRIEAIQKTCKESGLLNKRNLYVVRSEPMFNPAVIVILF-S

Query:  LICIILAYLSARQ
        L+ I++ YL A Q
Subjt:  LICIILAYLSARQ

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGGAGTTTGAGGGCGATTTTGAGTCATCCGGATGACTTTTATCCGCTTTTGAAACTGAAAATGGCTGCAAGACATGCGGAGAAGCAGATCCCGCCGGAGCCTCATTG
GGGATTTTGCTATTCCATGTTGCATAAGGTTTCTCGAAGCTTTGCTCTCGTTATTCAGCAGCTTACGCCCGAGCTTCGAAATGCTGTATGCATATTTTATCTCGTTTTGC
GAGCCCTCGACACTGTTGAGGATGATACAAGCATAGAAACCGATATCAAAGTGCCCATTCTGAACGCTTTTCACCGTCACATATATAACCCTGATTGGCACTTTTCATGT
GGCACAAAGCACTATAAGGTTCTCATGGATGAGTTTCATCATGTTTCAACTGCGTTTCTTGAACTTGCAAAAGGGTACCAGGAAGCGATTGAGGATATCACGAAACGAAT
GGGTGCTGGAATGGCTAAATTCATTTGCAAAGAGGTAGAGACAGTTGACGATTATGATGAATATTGCCACTACGTAGCTGGACTTGTCGGACTTGGTTTGTCGAAGTTGT
TCCACGCATCGAAGTTGGAGGATTTGGCATCTGATTCTCTTTCAAATTCTATGGGATTGTTTCTTCAGAAAACAAACATTATTCGAGATTACTTGGAGGACATCAATGAG
ATACCGAAATCTCGAATGTTTTGGCCTCGCGAGATTTGGAACAAATATGCTGATAAATTAGAGGATTTTAAATATGAGAAGAATTCGGTCAAGGCTGTGCAATGCCTCAA
TGATTTGGTCACTAATGCTTTGAACCATGTGGAGGATTGTCTGATATACATGTCTAACTTACGAGATCTTTCCATATTTCGATTTTGTGCAATCCCTCAGATTATGGCGA
TTGGAACCTTAGCATTATGCTACAACAATGTCGAAGTCTTCAGGGGTGTCGTCAAAATGCGTCGGGGTCTTACTGCAAAGATCATTGATCGAACGAAAACAGTTGCGGAT
GTCTATGGAGCTTTCTTTGATTTCTCTGTTATGCTGAAGGCTAAGGTCAACAACAATGATCCTAATGCTGCTAAAACCCTGAGCAGGATTGAGGCAATACAGAAAACGTG
CAAGGAGTCGGGTCTCTTGAACAAACGGAACTTGTATGTGGTAAGAAGTGAGCCAATGTTCAATCCAGCTGTGATTGTCATCCTTTTCAGCCTAATATGCATCATTCTCG
CGTATCTCTCCGCCAGACAGAGTTTGAACCGAACACGACGTGAACTTGGACGGTATGATTTAGTTTCTGGGTCCATAATCTTCCTCAGAGCTTTGTTTAAATGTTAG

mRNA sequence

Show/hide mRNA sequence

GATGAACAAAACTGAAAATTGATTGCCATTTGAATTTGGGGCCGTAAAAAGCTTTGGTCTCTGCCAATTTGTATTGTACTCAGTGCTCACGCGTTCACCAGAACGTCCAG
TTTTGTCTTCAAATTTCCTCCCCTGCCCTTCCATTTCTGCAAATTCTTAGAAACCCACGTATTTCACGTTGTTTTCTTTGATTACAGCATCTCAACAAACAATCTGCACA
GCTATATAAGCAGATTCCATGGATTTATCTTCTTTAAATATCTGAAAACTATCATCCTTCATTAAATTGTCCGTCATTTCGGGATTTGGGCTTCAATCATTCTGTTTTCT
TCGCTATTTTGTTCGATTTTGTCATTGTCGATTGAATTAGAGGATCGCCATTTGAGGAATTGGGTGTTTGCGCTGTGGTTTGACCGGCGTGGGATCTGGAACTTGTGGAG
TTTGTGTGTTTGAAATCGGATTGAGAGCTTGAAATGGGGAGTTTGAGGGCGATTTTGAGTCATCCGGATGACTTTTATCCGCTTTTGAAACTGAAAATGGCTGCAAGACA
TGCGGAGAAGCAGATCCCGCCGGAGCCTCATTGGGGATTTTGCTATTCCATGTTGCATAAGGTTTCTCGAAGCTTTGCTCTCGTTATTCAGCAGCTTACGCCCGAGCTTC
GAAATGCTGTATGCATATTTTATCTCGTTTTGCGAGCCCTCGACACTGTTGAGGATGATACAAGCATAGAAACCGATATCAAAGTGCCCATTCTGAACGCTTTTCACCGT
CACATATATAACCCTGATTGGCACTTTTCATGTGGCACAAAGCACTATAAGGTTCTCATGGATGAGTTTCATCATGTTTCAACTGCGTTTCTTGAACTTGCAAAAGGGTA
CCAGGAAGCGATTGAGGATATCACGAAACGAATGGGTGCTGGAATGGCTAAATTCATTTGCAAAGAGGTAGAGACAGTTGACGATTATGATGAATATTGCCACTACGTAG
CTGGACTTGTCGGACTTGGTTTGTCGAAGTTGTTCCACGCATCGAAGTTGGAGGATTTGGCATCTGATTCTCTTTCAAATTCTATGGGATTGTTTCTTCAGAAAACAAAC
ATTATTCGAGATTACTTGGAGGACATCAATGAGATACCGAAATCTCGAATGTTTTGGCCTCGCGAGATTTGGAACAAATATGCTGATAAATTAGAGGATTTTAAATATGA
GAAGAATTCGGTCAAGGCTGTGCAATGCCTCAATGATTTGGTCACTAATGCTTTGAACCATGTGGAGGATTGTCTGATATACATGTCTAACTTACGAGATCTTTCCATAT
TTCGATTTTGTGCAATCCCTCAGATTATGGCGATTGGAACCTTAGCATTATGCTACAACAATGTCGAAGTCTTCAGGGGTGTCGTCAAAATGCGTCGGGGTCTTACTGCA
AAGATCATTGATCGAACGAAAACAGTTGCGGATGTCTATGGAGCTTTCTTTGATTTCTCTGTTATGCTGAAGGCTAAGGTCAACAACAATGATCCTAATGCTGCTAAAAC
CCTGAGCAGGATTGAGGCAATACAGAAAACGTGCAAGGAGTCGGGTCTCTTGAACAAACGGAACTTGTATGTGGTAAGAAGTGAGCCAATGTTCAATCCAGCTGTGATTG
TCATCCTTTTCAGCCTAATATGCATCATTCTCGCGTATCTCTCCGCCAGACAGAGTTTGAACCGAACACGACGTGAACTTGGACGGTATGATTTAGTTTCTGGGTCCATA
ATCTTCCTCAGAGCTTTGTTTAAATGTTAG

Protein sequence

Show/hide protein sequence

MGSLRAILSHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLTPELRNAVCIFYLVLRALDTVEDDTSIETDIKVPILNAFHRHIYNPDWHFSC
GTKHYKVLMDEFHHVSTAFLELAKGYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGLSKLFHASKLEDLASDSLSNSMGLFLQKTNIIRDYLEDINE
IPKSRMFWPREIWNKYADKLEDFKYEKNSVKAVQCLNDLVTNALNHVEDCLIYMSNLRDLSIFRFCAIPQIMAIGTLALCYNNVEVFRGVVKMRRGLTAKIIDRTKTVAD
VYGAFFDFSVMLKAKVNNNDPNAAKTLSRIEAIQKTCKESGLLNKRNLYVVRSEPMFNPAVIVILFSLICIILAYLSARQSLNRTRRELGRYDLVSGSIIFLRALFKC

CmoCh02G003700 (gene) of Cucurbita moschata (Rifu) v1 genome