; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh02G004050 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G004050
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionglycine-rich RNA-binding protein-like
Genome locationCmo_Chr02:2084484..2087078
RNA-Seq ExpressionCmoCh02G004050
SyntenyCmoCh02G004050
Gene Ontology termsGO:0006858 - extracellular transport (biological process)
GO:0006886 - intracellular protein transport (biological process)
GO:0006888 - endoplasmic reticulum to Golgi vesicle-mediated transport (biological process)
GO:0006890 - retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (biological process)
GO:0006891 - intra-Golgi vesicle-mediated transport (biological process)
GO:1990428 - miRNA transport (biological process)
GO:0050688 - regulation of defense response to virus (biological process)
GO:0000139 - Golgi membrane (cellular component)
GO:0005615 - extracellular space (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0030126 - COPI vesicle coat (cellular component)
GO:0035198 - miRNA binding (molecular function)
GO:0035197 - siRNA binding (molecular function)
GO:0005198 - structural molecule activity (molecular function)
GO:0003729 - mRNA binding (molecular function)
GO:0003727 - single-stranded RNA binding (molecular function)
InterPro domainsIPR035979 - RNA-binding domain superfamily
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR000504 - RNA recognition motif domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605080.1 hypothetical protein SDJN03_02397, partial [Cucurbita argyrosperma subsp. sororia]1.0e-6698.84Show/hide
Query:  MASSSVEYRCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFVDEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGGYNRGG
        MASSSVEYRCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFVDEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGGYNRGG
Subjt:  MASSSVEYRCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFVDEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGGYNRGG

Query:  GGGGGYGGRREGGGGGYNRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGGGDGGRYQR-GGGGGGGSEGGWRN
        GGGGGYGGRREGGGGGYNRGGGGYGGGGGGYGGGGYGGGRDRGY GGGGGDGGRYQR GGGGGGGSEGGWRN
Subjt:  GGGGGYGGRREGGGGGYNRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGGGDGGRYQR-GGGGGGGSEGGWRN

XP_022947194.1 glycine-rich RNA-binding protein 1-like [Cucurbita moschata]1.3e-69100Show/hide
Query:  MASSSVEYRCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFVDEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGGYNRGG
        MASSSVEYRCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFVDEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGGYNRGG
Subjt:  MASSSVEYRCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFVDEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGGYNRGG

Query:  GGGGGYGGRREGGGGGYNRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGGGDGGRYQRGGGGGGGSEGGWRN
        GGGGGYGGRREGGGGGYNRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGGGDGGRYQRGGGGGGGSEGGWRN
Subjt:  GGGGGYGGRREGGGGGYNRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGGGDGGRYQRGGGGGGGSEGGWRN

XP_023006868.1 glycine-rich RNA-binding protein 1-like isoform X1 [Cucurbita maxima]1.9e-6598.28Show/hide
Query:  MASSSVEYRCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFVDEEAMRSAIEAMNGQNLDGRSITVNEAQQR-GGGGGGGGYNRG
        MASSSVEYRCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFVDEEAMRSAIEAMNGQNLDGRSITVNEAQQR GGGGGGGGYNRG
Subjt:  MASSSVEYRCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFVDEEAMRSAIEAMNGQNLDGRSITVNEAQQR-GGGGGGGGYNRG

Query:  GGGGGGYGGRRE-GGGGGYNRGGGGYGGGGGGY-GGGGYGGGRDRGYGGGGGGDGGRYQRGGGGGGGSEGGWRN
        GGGGGGYGGRRE GGGGGYNRGGGGYGGGGGGY GGGGYGGGRDRGYGGGGGGDGGRYQRGGGGGGGSEGGWRN
Subjt:  GGGGGGYGGRRE-GGGGGYNRGGGGYGGGGGGY-GGGGYGGGRDRGYGGGGGGDGGRYQRGGGGGGGSEGGWRN

XP_023512522.1 glycine-rich RNA-binding protein 1-like [Cucurbita pepo subsp. pepo]8.2e-6194.19Show/hide
Query:  MASSSVEYRCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFVDEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGGYNRGG
        MASSSVEYRCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTF +EE+MRSAIEAMNGQNLDGRSITVNEAQQR GGGGGGGYNRGG
Subjt:  MASSSVEYRCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFVDEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGGYNRGG

Query:  GGGGGYGGRREGGGGGYNRGGGGYGGGGGGYGGGGY-GGGRDRGYGGGGGGDGGRYQRGGGGGGGSEGGWRN
        GGGGGYGGRREGGGGGYNRGGGGYGGGGGGYGGGGY GGGRDRGYGGG G  G RY RGGGGGGGSEGGWRN
Subjt:  GGGGGYGGRREGGGGGYNRGGGGYGGGGGGYGGGGY-GGGRDRGYGGGGGGDGGRYQRGGGGGGGSEGGWRN

XP_023533100.1 glycine-rich RNA-binding protein 1-like isoform X1 [Cucurbita pepo subsp. pepo]4.0e-6899.42Show/hide
Query:  MASSSVEYRCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFVDEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGGYNRGG
        MASSSVEYRCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFVDEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGGYNRGG
Subjt:  MASSSVEYRCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFVDEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGGYNRGG

Query:  GGGGGYGGRREGGGGGYNRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGGGDGGRYQRGGGGGGGSEGGWRN
        GGGGGYGGRREGGGGGYNRGGGGYGGGGGGYGGGGYGGGRDRGY GGGGGDGGRYQRGGGGGGGSEGGWRN
Subjt:  GGGGGYGGRREGGGGGYNRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGGGDGGRYQRGGGGGGGSEGGWRN

TrEMBL top hitse value%identityAlignment
A0A6J1FRL7 glycine-rich RNA-binding protein-like1.1e-5893.14Show/hide
Query:  MASSSVEYRCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFVDEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGGYNR-G
        MASSSVEYRCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFV+E++MRSAIEAMNGQNLDGRSITVNEAQQR GGGGGGGYNR G
Subjt:  MASSSVEYRCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFVDEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGGYNR-G

Query:  GGGGGGYGGRRE-GGGGGYNRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGGGDGGRYQR--GGGGGGGSEGGWRN
        GGGGGGYGGRRE GGGGGYNRGGGGYGGGGGGYGGGGYGGGRDRGYGGGG G G RY R  GGGGGGGSEGGWRN
Subjt:  GGGGGGYGGRRE-GGGGGYNRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGGGDGGRYQR--GGGGGGGSEGGWRN

A0A6J1G631 glycine-rich RNA-binding protein 1-like6.1e-70100Show/hide
Query:  MASSSVEYRCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFVDEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGGYNRGG
        MASSSVEYRCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFVDEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGGYNRGG
Subjt:  MASSSVEYRCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFVDEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGGYNRGG

Query:  GGGGGYGGRREGGGGGYNRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGGGDGGRYQRGGGGGGGSEGGWRN
        GGGGGYGGRREGGGGGYNRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGGGDGGRYQRGGGGGGGSEGGWRN
Subjt:  GGGGGYGGRREGGGGGYNRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGGGDGGRYQRGGGGGGGSEGGWRN

A0A6J1JGK0 glycine-rich RNA-binding protein-like1.6e-5790.91Show/hide
Query:  MASSSVEYRCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFVDEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGGYNR--
        MASSSVEYRCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFV+E++MRSAIEAMNGQNLDGRSITVNEAQQR GGGGGGGYNR  
Subjt:  MASSSVEYRCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFVDEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGGYNR--

Query:  -GGGGGGGYGGRREGGGGGYNRGGGGY--GGGGGGYGGGGYGGGRDRGYGGGGGGDGGRYQRGGGGGGGSEGGWRN
         GGGGGGGYGGRREGGGGGYNRGGGGY  GGGGGGYGGGGYGGGRDRGYGGG G  G RY R  GGGGGSEGGWRN
Subjt:  -GGGGGGGYGGRREGGGGGYNRGGGGY--GGGGGGYGGGGYGGGRDRGYGGGGGGDGGRYQRGGGGGGGSEGGWRN

A0A6J1L3C8 glycine-rich RNA-binding, abscisic acid-inducible protein-like isoform X21.2e-5789.02Show/hide
Query:  MASSSVEYRCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFVDEEAMRSAIEAMNGQNLDGRSITVNEAQQR-GGGGGGGGYNRG
        MASSSVEYRCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFVDEEAMRSAIEAMNGQNLDGRSITVNEAQQR GGGGGGGGYNRG
Subjt:  MASSSVEYRCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFVDEEAMRSAIEAMNGQNLDGRSITVNEAQQR-GGGGGGGGYNRG

Query:  GGGGGGYGGRREGGGGGYNRGGGGYGGGGGGY-GGGGYGGGRDRGYGGGGGGDGGRYQRGGGGGGGSEGGWRN
        GGG                 GGGGYGGGGGGY GGGGYGGGRDRGYGGGGGGDGGRYQRGGGGGGGSEGGWRN
Subjt:  GGGGGGYGGRREGGGGGYNRGGGGYGGGGGGY-GGGGYGGGRDRGYGGGGGGDGGRYQRGGGGGGGSEGGWRN

A0A6J1L652 glycine-rich RNA-binding protein 1-like isoform X19.1e-6698.28Show/hide
Query:  MASSSVEYRCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFVDEEAMRSAIEAMNGQNLDGRSITVNEAQQR-GGGGGGGGYNRG
        MASSSVEYRCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFVDEEAMRSAIEAMNGQNLDGRSITVNEAQQR GGGGGGGGYNRG
Subjt:  MASSSVEYRCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFVDEEAMRSAIEAMNGQNLDGRSITVNEAQQR-GGGGGGGGYNRG

Query:  GGGGGGYGGRRE-GGGGGYNRGGGGYGGGGGGY-GGGGYGGGRDRGYGGGGGGDGGRYQRGGGGGGGSEGGWRN
        GGGGGGYGGRRE GGGGGYNRGGGGYGGGGGGY GGGGYGGGRDRGYGGGGGGDGGRYQRGGGGGGGSEGGWRN
Subjt:  GGGGGGYGGRRE-GGGGGYNRGGGGYGGGGGGY-GGGGYGGGRDRGYGGGGGGDGGRYQRGGGGGGGSEGGWRN

SwissProt top hitse value%identityAlignment
P49310 Glycine-rich RNA-binding protein GRP1A3.6e-3569.71Show/hide
Query:  MASSSVEYRCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFVDEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGGYNRGG
        MAS  VEYRCFVGGLAWATD+ ALE AFS +GE++++KI+NDRETGRSRGFGFVTF DE++M+ AIE MNGQ+LDGRSITVNEAQ RG GGGGG    G 
Subjt:  MASSSVEYRCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFVDEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGGYNRGG

Query:  GGGGGYGGRREGGGGGYNRGGGGYGGGG--GGYGGGGYG----GGRDRGYGGGGGGDGGRYQRGGGGGGGSEGGW
        GGGGGY   R GGGGGY  GGGGYGGGG  GGY GGG G    GG   GYGGGG  DGG  + GG GG G  GGW
Subjt:  GGGGGYGGRREGGGGGYNRGGGGYGGGG--GGYGGGGYG----GGRDRGYGGGGGGDGGRYQRGGGGGGGSEGGW

P49311 Glycine-rich RNA-binding protein GRP2A2.8e-3571.93Show/hide
Query:  MASSSVEYRCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFVDEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGGYNRGG
        MAS  VEYRCFVGGLAWATD  +LE AFS FGE+V++KI+NDRETGRSRGFGFVTF DE++M+ AIE MNGQ+LDGRSITVNEAQ RG G GGGG   GG
Subjt:  MASSSVEYRCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFVDEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGGYNRGG

Query:  G--GGGGYGGRREGGGGGYNRGGGGYGGGGGGY-----GGGGYGGGRDRGYGGGGGGDGGRYQRGGGGGGG
        G  GGGGYGG   G GGG  R GGGY GGGGGY     GGGGYGGG  R  GG GGG+GG Y  GGGGGGG
Subjt:  G--GGGGYGGRREGGGGGYNRGGGGYGGGGGGY-----GGGGYGGGRDRGYGGGGGGDGGRYQRGGGGGGG

Q03250 Glycine-rich RNA-binding protein 78.6e-3768Show/hide
Query:  MASSSVEYRCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFVDEEAMRSAIEAMNGQNLDGRSITVNEAQQRGG-------GGGG
        MAS  VEYRCFVGGLAWATD+ ALE AF+ +G+++++KI+NDRETGRSRGFGFVTF DE+AM+ AIE MNGQ+LDGRSITVNEAQ RG        GGGG
Subjt:  MASSSVEYRCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFVDEEAMRSAIEAMNGQNLDGRSITVNEAQQRGG-------GGGG

Query:  GGYNRGGGGGGGYGGRREGGGGGYNRGGGGYGGGGGGY-----GGGGYGGGRDRGYGGGGGGDGGRYQRGGGGGG
        GGY  GGGGG   GG   GGGGG   GGGGY GGGGGY     GGG YGGGR  G GG GGG+GG Y   GGGGG
Subjt:  GGYNRGGGGGGGYGGRREGGGGGYNRGGGGYGGGGGGY-----GGGGYGGGRDRGYGGGGGGDGGRYQRGGGGGG

Q03878 Glycine-rich RNA-binding protein9.5e-3672.26Show/hide
Query:  SSVEYRCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFVDEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGGYNRGG---
        + VEYRCFVGGLAWAT++ +LE+AFS FG+I ++KI+NDRETGRSRGFGFVTF DE++MR AIE MNGQ LDGR+ITVNEAQ RG GGGGG    GG   
Subjt:  SSVEYRCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFVDEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGGYNRGG---

Query:  GGGGGYGGRREGGGGG-----YNRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGGG
        GGGGGYGGRREGGGGG        GGGGYGGGGGGYGG   GG  D GYGGGGGG
Subjt:  GGGGGYGGRREGGGGG-----YNRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGGG

Q99070 Glycine-rich RNA-binding protein 21.0e-3467.6Show/hide
Query:  MASSSVEYRCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFVDEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGGYNRGG
        MA++ VEYRCFVGGLAWAT+N  LE+AF++FG+++++K++ DRETGRSRGFGFVTF  E++M  AIE MNG+ LDGR+ITVN+AQ RGGGGGGGGY   G
Subjt:  MASSSVEYRCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFVDEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGGYNRGG

Query:  GGGGGYGGRREGGGGGYNRGGGGYGG---GGGGYGGGGYGGGRDRGYGG--GGGGDGGRYQRGGGGGGG---SEGGWRN
        GGGGGYGGR    GGGY  GGGGYGG   GGGGYGGGGYGGG   GYGG  GGGG GG    GGG GG    S G WRN
Subjt:  GGGGGYGGRREGGGGGYNRGGGGYGG---GGGGYGGGGYGGGRDRGYGG--GGGGDGGRYQRGGGGGGG---SEGGWRN

Arabidopsis top hitse value%identityAlignment
AT2G21660.1 cold, circadian rhythm, and rna binding 26.1e-3868Show/hide
Query:  MASSSVEYRCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFVDEEAMRSAIEAMNGQNLDGRSITVNEAQQRGG-------GGGG
        MAS  VEYRCFVGGLAWATD+ ALE AF+ +G+++++KI+NDRETGRSRGFGFVTF DE+AM+ AIE MNGQ+LDGRSITVNEAQ RG        GGGG
Subjt:  MASSSVEYRCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFVDEEAMRSAIEAMNGQNLDGRSITVNEAQQRGG-------GGGG

Query:  GGYNRGGGGGGGYGGRREGGGGGYNRGGGGYGGGGGGY-----GGGGYGGGRDRGYGGGGGGDGGRYQRGGGGGG
        GGY  GGGGG   GG   GGGGG   GGGGY GGGGGY     GGG YGGGR  G GG GGG+GG Y   GGGGG
Subjt:  GGYNRGGGGGGGYGGRREGGGGGYNRGGGGYGGGGGGY-----GGGGYGGGRDRGYGGGGGGDGGRYQRGGGGGG

AT2G21660.2 cold, circadian rhythm, and rna binding 21.4e-3771.78Show/hide
Query:  MASSSVEYRCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFVDEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGGYNRGG
        MAS  VEYRCFVGGLAWATD+ ALE AF+ +G+++++KI+NDRETGRSRGFGFVTF DE+AM+ AIE MNGQ+LDGRSITVNEAQ RG GGGGG  +RGG
Subjt:  MASSSVEYRCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFVDEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGGYNRGG

Query:  GGGGGYGGRREGGGGGYNRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGGGDGGRYQRGGGGGG
        G  GG GGRRE GGGGY+ GGGGY   GG  GGG YGGGR  G GG GGG+GG Y   GGGGG
Subjt:  GGGGGYGGRREGGGGGYNRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGGGDGGRYQRGGGGGG

AT4G39260.1 cold, circadian rhythm, and RNA binding 17.7e-3367.65Show/hide
Query:  SSVEYRCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFVDEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGG-------GGGY
        S VEYRCFVGGLAWAT++  L++ FS FG+++++KI+NDRE+GRSRGFGFVTF DE+AMR AIE MNG+ LDGR ITVNEAQ RG GGG       GGGY
Subjt:  SSVEYRCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFVDEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGG-------GGGY

Query:  NRGGGG---GGGYGGRREGGGGGYNRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGGGDGGRYQRGGGGGG
          GGGG   GGG GG   GGGGGY R  GGYG GGGG GG GYGGG  R  GG GGGDGG Y  GGGGGG
Subjt:  NRGGGG---GGGYGGRREGGGGGYNRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGGGDGGRYQRGGGGGG

AT4G39260.2 cold, circadian rhythm, and RNA binding 12.2e-3268.38Show/hide
Query:  SSVEYRCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFVDEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGGYNRGGGGG
        S VEYRCFVGGLAWAT++  L++ FS FG+++++KI+NDRE+GRSRGFGFVTF DE+AMR AIE MNG+ LDGR ITVNEAQ RG GGGGGG    GG G
Subjt:  SSVEYRCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFVDEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGGYNRGGGGG

Query:  GGYGGRREGGGGGYNRGGGGYGGGGGGYGGGGYGGG
        GGY   R GGGGGY+      GGGGGGY GGG GGG
Subjt:  GGYGGRREGGGGGYNRGGGGYGGGGGGYGGGGYGGG

AT5G61030.1 glycine-rich RNA-binding protein 37.7e-1756.21Show/hide
Query:  RCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFVDEEAMRSAIEAMNGQNLDGRSITVNEAQQR--GGGGGGGGYNRGGGGGGGY
        + F+GG+A++ D  +L +AF+ +GE+V+ +++ DRETGRSRGFGFVTF   EA  SAI+A++G++L GR + VN A  R  GGG GGGGY  GGGG GG 
Subjt:  RCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFVDEEAMRSAIEAMNGQNLDGRSITVNEAQQR--GGGGGGGGYNRGGGGGGGY

Query:  GGRREGGGGGYNRGGGGYGGGGGGYG---GGGYGGGRDRGYGG-GGGGDGG--RYQRGGGGGGGSEGGW
        GG   GG GGY  G GGYGGG GGYG   GGGYGG    GYGG G GG GG      G GGG GS GG+
Subjt:  GGRREGGGGGYNRGGGGYGGGGGGYG---GGGYGGGRDRGYGG-GGGGDGG--RYQRGGGGGGGSEGGW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCTCTTCTGTTGAGTACCGTTGCTTCGTGGGTGGCCTTGCGTGGGCCACTGATAATCATGCCTTAGAGAAGGCTTTCTCTTCCTTTGGCGAGATCGTGGAAGC
GAAGATCGTCAACGACCGTGAAACCGGAAGATCGAGGGGATTTGGATTCGTGACGTTTGTGGATGAAGAGGCCATGAGAAGCGCAATCGAAGCGATGAACGGCCAGAACC
TTGATGGACGCAGTATCACCGTTAACGAGGCTCAGCAAAGAGGCGGTGGCGGTGGCGGCGGTGGTTACAACCGTGGTGGAGGTGGTGGTGGTGGTTACGGTGGACGCCGT
GAAGGAGGTGGTGGTGGATACAACCGCGGAGGCGGTGGTTACGGTGGTGGTGGAGGTGGATACGGAGGTGGTGGTTATGGTGGAGGACGGGACCGTGGATACGGCGGCGG
TGGTGGTGGCGATGGTGGCCGCTACCAGCGAGGAGGTGGCGGTGGCGGTGGATCTGAAGGAGGGTGGAGAAATTAG
mRNA sequenceShow/hide mRNA sequence
AAGGTGCCAATCACACCGCCTTTTAGGTTAACCCTGATTGCAAATAAACCGCGTGAGTTAAATACTGAGCAAACCCTAAAACTAACCATAGTTATCTTCTGCCCTCTATA
TAACCAACCCCTTGGTTCATTTCTAACTCATTGCGTTCGTCTTCAGGGGTGTGGATTTGTGTCGATCCCCCTCTCTCTCTTTTCCTTCTTGTTTGAACCCCTTTCTAGGG
TTAGGGTTTTTTTGATTTCCATGGCTTCCTCTTCTGTTGAGTACCGTTGCTTCGTGGGTGGCCTTGCGTGGGCCACTGATAATCATGCCTTAGAGAAGGCTTTCTCTTCC
TTTGGCGAGATCGTGGAAGCGAAGATCGTCAACGACCGTGAAACCGGAAGATCGAGGGGATTTGGATTCGTGACGTTTGTGGATGAAGAGGCCATGAGAAGCGCAATCGA
AGCGATGAACGGCCAGAACCTTGATGGACGCAGTATCACCGTTAACGAGGCTCAGCAAAGAGGCGGTGGCGGTGGCGGCGGTGGTTACAACCGTGGTGGAGGTGGTGGTG
GTGGTTACGGTGGACGCCGTGAAGGAGGTGGTGGTGGATACAACCGCGGAGGCGGTGGTTACGGTGGTGGTGGAGGTGGATACGGAGGTGGTGGTTATGGTGGAGGACGG
GACCGTGGATACGGCGGCGGTGGTGGTGGCGATGGTGGCCGCTACCAGCGAGGAGGTGGCGGTGGCGGTGGATCTGAAGGAGGGTGGAGAAATTAGGCGGTGGTGCATTA
CGATTTAGCTTTTGGTTTCGTCGAAGTATTAGTGTGATGATAAAAAAAAAAAAAAAAATCTTAGCAGCCTTTTGATTTCCCTGTACTGTGTTCCGTTTGGGTGCTCTCTT
TTTTTGACCGATGACCGATGGGTTTCGTGTTCCTCATTATGTCTCTGTTACAACGAAAAAATGATATAAGAAAATGAAGTAGTACAGCTCTTCGTTCTCAACAAATATAT
GTTTCTGTTCATCCTATTTCTCTGCCGAATCTCCGCCATGGCCAGGAATCTCCATTAAAGGGGTTATTCAGAAAAAGCAAGATCCATTTTCATGATATTTTCAGAGGTGT
CCTGTACTGTGACCATAAATTATTGCACTGGGAACGGCAAATGGGGAAGAAATTATTAGTTTTTAATATAATTTGGCTGTAGTTTTGGTCTGATCCGATTGACGACAGGT
AGGCAGAAAATATTGTAGGAGATTCGTGATATTTTTGTGGAAAAAGATGTGAGATATTTTTGCAATGATTCTCGTGGTATATTTCTTTTTTAATTGGGCCATGATGGGTC
TGCCACATCGAATTCCGTAATGGACAAGTGGGCTTGGAATCTTATCGTTGAAGGAATATTCTTTCTTTCAAATTTTGAATTTAATTTGTCAAATGGCTAAGCGAACACCC
CATTGTTATGGAACTTTGTGTAATTGTGGACACATTTCATTTCTTTGAGTTAGTAATTACCTCTGCTTTCCAATTTTAAGGGAAATAGAGATGAGTTAAAGACATGCGAA
TGTGGAGTTCTTAATATCTGCAGTGTACTAGTGACGCTGAGTTTTGAAGGGGATAGACACCGAACACGGTATGTCAGCAAAGACATTGAGTTGAGCTCCGAAGAGGGGTG
GACAGGATGGTGTGCCATAGAAGATGCTGGGACCCAAAAAGATGGATTGTAAGATCCCACATCAATTGGAGAAAGGAGATGAATCTCTCTCTGGAAGGAAAACCAAGATT
AGATCCGTCCTCAATTTCTTTATAAGCCCCCAAAAATATGAGATAATATATCTAGAGAGAAGCTTCAAAGGAAGAACGAGGATTCCATTACAAAATGATGAGTAAAGAGT
AAAGATAGTTTGAAGCAGAAGAATGTAAGGGACTGGATGATGAATGAGAGAGAGGGTTTAAGGGTAAAAAAACAGAGGAAAGACATATGGGGTCCAATTCCCCATGTATT
GTTGTCGTTTTTCGCTGTAGCCGAATATTGTGGCCATGCCCTTCCACACCTTCTCACATGCCCTTCTCCTTCTCCTTCTCTCTCTCTCTCTCTCTCTCTCTCCCCCTTTT
CCGAATACTTTCTTAAGGATTACTCGGTGATTACAGACACCTACTAAGTCCTACCAAGCCATTATAATGCTTATCAGGTTCTATCCATCTTTTTAGTTATTGGGCTCTAT
CAACCAAGTATTGTTCCAACCGAGAACTATCGAGTCATATTGATGGTTTATGTCGCCTTGAGCATCAACATGACATCTAACTTTACTACTTGTTTGAATGTGCTTATCGA
AACA
Protein sequenceShow/hide protein sequence
MASSSVEYRCFVGGLAWATDNHALEKAFSSFGEIVEAKIVNDRETGRSRGFGFVTFVDEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGGYNRGGGGGGGYGGRR
EGGGGGYNRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGGGDGGRYQRGGGGGGGSEGGWRN