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CmoCh02G004110 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G004110
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionorgan-specific protein P4-like
Genome locationCmo_Chr02:2125528..2127097
RNA-Seq ExpressionCmoCh02G004110
SyntenyCmoCh02G004110
Gene Ontology termsNA
InterPro domainsIPR024489 - Organ specific protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605086.1 hypothetical protein SDJN03_02403, partial [Cucurbita argyrosperma subsp. sororia]9.4e-4396.81Show/hide
Query:  MKLSAAFFLLFLILLANVSHARKEKGEYWKKVMKDEAIPEMLKELLFDDDSLVSSDAQSEHFMNNFDTHPNAIIYHSHGATHDHPGHKTKPSAP
        MKLSAAFFLL L+LLANVSHARKEKGEYWKKVMKDEAIPEMLKELLFDDDSLVSSDAQSEHFMNNFDTHPNAIIYHSHGAT DHPGHKTKPSAP
Subjt:  MKLSAAFFLLFLILLANVSHARKEKGEYWKKVMKDEAIPEMLKELLFDDDSLVSSDAQSEHFMNNFDTHPNAIIYHSHGATHDHPGHKTKPSAP

KAG7035093.1 hypothetical protein SDJN02_01888, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-3697.5Show/hide
Query:  LANVSHARKEKGEYWKKVMKDEAIPEMLKELLFDDDSLVSSDAQSEHFMNNFDTHPNAIIYHSHGATHDHPGHKTKPSAP
        LANVSHARKEKGEYWKKVMKDEAIPEMLKELLFDDDSL SSDAQSEHFMNNFDTHPNAIIYHSHGAT DHPGHKTKPSAP
Subjt:  LANVSHARKEKGEYWKKVMKDEAIPEMLKELLFDDDSLVSSDAQSEHFMNNFDTHPNAIIYHSHGATHDHPGHKTKPSAP

XP_022947675.1 organ-specific protein P4-like [Cucurbita moschata]7.7e-45100Show/hide
Query:  MKLSAAFFLLFLILLANVSHARKEKGEYWKKVMKDEAIPEMLKELLFDDDSLVSSDAQSEHFMNNFDTHPNAIIYHSHGATHDHPGHKTKPSAP
        MKLSAAFFLLFLILLANVSHARKEKGEYWKKVMKDEAIPEMLKELLFDDDSLVSSDAQSEHFMNNFDTHPNAIIYHSHGATHDHPGHKTKPSAP
Subjt:  MKLSAAFFLLFLILLANVSHARKEKGEYWKKVMKDEAIPEMLKELLFDDDSLVSSDAQSEHFMNNFDTHPNAIIYHSHGATHDHPGHKTKPSAP

XP_023006974.1 organ-specific protein P4-like [Cucurbita maxima]3.0e-4194.68Show/hide
Query:  MKLSAAFFLLFLILLANVSHARKEKGEYWKKVMKDEAIPEMLKELLFDDDSLVSSDAQSEHFMNNFDTHPNAIIYHSHGATHDHPGHKTKPSAP
        MKLSAAFFLL L+LLANVSHARKEKGEYWKKVMKDEAIPEMLKELLFDDDSLVSSDAQSE FMNNFDTHPNAIIYHSHGATHDHPGHKTK +AP
Subjt:  MKLSAAFFLLFLILLANVSHARKEKGEYWKKVMKDEAIPEMLKELLFDDDSLVSSDAQSEHFMNNFDTHPNAIIYHSHGATHDHPGHKTKPSAP

XP_023534667.1 organ-specific protein P4-like [Cucurbita pepo subsp. pepo]4.2e-4396.81Show/hide
Query:  MKLSAAFFLLFLILLANVSHARKEKGEYWKKVMKDEAIPEMLKELLFDDDSLVSSDAQSEHFMNNFDTHPNAIIYHSHGATHDHPGHKTKPSAP
        MKLSAAFFLL L+LLA+VSHARKEKGEYWKKVMKDEAIPEMLKELLFDDDSLVSSDAQSEHFMNNFDTHPNAIIYHSHGATHDHPGHKTKPSAP
Subjt:  MKLSAAFFLLFLILLANVSHARKEKGEYWKKVMKDEAIPEMLKELLFDDDSLVSSDAQSEHFMNNFDTHPNAIIYHSHGATHDHPGHKTKPSAP

TrEMBL top hitse value%identityAlignment
A0A6J1D5L4 organ-specific protein P41.3e-1858.16Show/hide
Query:  MKLSAAFFLLF-LILLANVSHARKEKGEYWKKVMKDEAIPEMLKELLFDDDSLVSSDAQSEHFMNNFDTHPNAIIYHSH----GATHDHPGHKTKPSA
        MKLS AFFLL  L+L A   + RK++GEYWKK+MK+E IPE+LKELL+DD    S   Q+E FM+NFD HPNAIIYHSH     A H+H   K K +A
Subjt:  MKLSAAFFLLF-LILLANVSHARKEKGEYWKKVMKDEAIPEMLKELLFDDDSLVSSDAQSEHFMNNFDTHPNAIIYHSH----GATHDHPGHKTKPSA

A0A6J1FYV4 organ-specific protein P4-like1.7e-1862.79Show/hide
Query:  MKLSAAFFLLF-LILLANVSH-ARKEKGEYWKKVMKDEAIPEMLKELLFDDDSLVSSDAQSEHFMNNFDTHPNAIIYHSHGATHDH
        MKLS AFFLL  L+L  +VSH +RK++G+YWKK+MK+E IPEMLKELLFDD  +   + Q + FMNNFD HPNAIIYH+H   H H
Subjt:  MKLSAAFFLLF-LILLANVSH-ARKEKGEYWKKVMKDEAIPEMLKELLFDDDSLVSSDAQSEHFMNNFDTHPNAIIYHSHGATHDH

A0A6J1G7K5 organ-specific protein P4-like3.7e-45100Show/hide
Query:  MKLSAAFFLLFLILLANVSHARKEKGEYWKKVMKDEAIPEMLKELLFDDDSLVSSDAQSEHFMNNFDTHPNAIIYHSHGATHDHPGHKTKPSAP
        MKLSAAFFLLFLILLANVSHARKEKGEYWKKVMKDEAIPEMLKELLFDDDSLVSSDAQSEHFMNNFDTHPNAIIYHSHGATHDHPGHKTKPSAP
Subjt:  MKLSAAFFLLFLILLANVSHARKEKGEYWKKVMKDEAIPEMLKELLFDDDSLVSSDAQSEHFMNNFDTHPNAIIYHSHGATHDHPGHKTKPSAP

A0A6J1JGL9 organ-specific protein S2-like2.3e-1862.92Show/hide
Query:  MKLSAAFFLLF-LILLANVSH-ARKEKGEYWKKVMKDEAIPEMLKELLFDDDSLVSSDAQSEHFMNNFDTHPNAIIYHSHGATHDHPGH
        MKLS AFFLL  L+L  +VSH +RK++G+YWKK+MK+E IPEMLKELLFDD  +   + Q + FMNNFD HPNAIIYH+H   H H GH
Subjt:  MKLSAAFFLLF-LILLANVSH-ARKEKGEYWKKVMKDEAIPEMLKELLFDDDSLVSSDAQSEHFMNNFDTHPNAIIYHSHGATHDHPGH

A0A6J1L3N5 organ-specific protein P4-like1.5e-4194.68Show/hide
Query:  MKLSAAFFLLFLILLANVSHARKEKGEYWKKVMKDEAIPEMLKELLFDDDSLVSSDAQSEHFMNNFDTHPNAIIYHSHGATHDHPGHKTKPSAP
        MKLSAAFFLL L+LLANVSHARKEKGEYWKKVMKDEAIPEMLKELLFDDDSLVSSDAQSE FMNNFDTHPNAIIYHSHGATHDHPGHKTK +AP
Subjt:  MKLSAAFFLLFLILLANVSHARKEKGEYWKKVMKDEAIPEMLKELLFDDDSLVSSDAQSEHFMNNFDTHPNAIIYHSHGATHDHPGHKTKPSAP

SwissProt top hitse value%identityAlignment
P17771 Organ-specific protein P48.9e-0438.75Show/hide
Query:  MKLSAAFFL--LFLILLANVSHARKEKGEYWKKVMKDEAIPEMLKELLFDDDSLVSSDA---QSEHFMNNFDTHPNAIIY
        M L +AF L  LFL L+     +RK+ GEYWK VMKD+ +PE ++ LL D  ++ +S     +++  +  F+  PNA  Y
Subjt:  MKLSAAFFL--LFLILLANVSHARKEKGEYWKKVMKDEAIPEMLKELLFDDDSLVSSDA---QSEHFMNNFDTHPNAIIY

P17772 Organ-specific protein S28.9e-0438.75Show/hide
Query:  MKLSAAFFL--LFLILLANVSHARKEKGEYWKKVMKDEAIPEMLKELLFDDDSLVSSDAQSEHFM---NNFDTHPNAIIY
        M L +AF L  LFL+L+     +RK+ GEYWK VMKD+ +PE ++ LL D  ++ +S   ++  M     F+  P A  Y
Subjt:  MKLSAAFFL--LFLILLANVSHARKEKGEYWKKVMKDEAIPEMLKELLFDDDSLVSSDAQSEHFM---NNFDTHPNAIIY

Arabidopsis top hitse value%identityAlignment
AT1G49310.1 unknown protein4.4e-0635.71Show/hide
Query:  MKLSAAFFLLFLILLANVSHARKEKG-------EYWKKVMKDEAIPEMLKELLFDDDSLVSSDAQSEHFMNNFDTHPNAIIYHS
        MK    + ++F++LL+ +      +G       EYWKK+MK+E +PE +KELL +           E F+ NFDT    IIYH+
Subjt:  MKLSAAFFLLFLILLANVSHARKEKG-------EYWKKVMKDEAIPEMLKELLFDDDSLVSSDAQSEHFMNNFDTHPNAIIYHS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCTTTCTGCTGCTTTCTTCCTCCTTTTTCTTATCCTGCTAGCAAATGTAAGCCATGCAAGGAAGGAGAAAGGGGAGTACTGGAAAAAGGTAATGAAAGATGAAGC
AATCCCAGAGATGCTGAAAGAGCTGTTGTTTGATGATGATTCATTGGTGAGCAGCGACGCCCAAAGCGAGCACTTCATGAACAACTTTGATACCCATCCAAATGCTATCA
TATATCACTCTCATGGCGCCACTCATGACCATCCTGGCCACAAAACCAAGCCCTCAGCCCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCTTTCTGCTGCTTTCTTCCTCCTTTTTCTTATCCTGCTAGCAAATGTAAGCCATGCAAGGAAGGAGAAAGGGGAGTACTGGAAAAAGGTAATGAAAGATGAAGC
AATCCCAGAGATGCTGAAAGAGCTGTTGTTTGATGATGATTCATTGGTGAGCAGCGACGCCCAAAGCGAGCACTTCATGAACAACTTTGATACCCATCCAAATGCTATCA
TATATCACTCTCATGGCGCCACTCATGACCATCCTGGCCACAAAACCAAGCCCTCAGCCCCATGATCATCATAGCATCCTGTCCACCATGACTTGTGTCAAGAGGCTTCA
TGTTTAGTTTGTGTAAATTATTATAGCTCTCGAATTGATATGGGTTTCTCTCCATCTTTGATCTCTTCTTGTTTGTTATATGATATATTAATACTATTTCAAGTTTTGTG
TGTTTAATTTGTGTTGTAATCTATATGGGTATTTTCTTTTTAACTTTATAAGATTTGGGTCGTGGTTCAAATATTCACTTATAAGTTCAGATGTAAGTTCAGATGGGTTG
GTCTGAGA
Protein sequenceShow/hide protein sequence
MKLSAAFFLLFLILLANVSHARKEKGEYWKKVMKDEAIPEMLKELLFDDDSLVSSDAQSEHFMNNFDTHPNAIIYHSHGATHDHPGHKTKPSAP