; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh02G004130 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G004130
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionATP-dependent Clp protease proteolytic subunit
Genome locationCmo_Chr02:2134974..2138994
RNA-Seq ExpressionCmoCh02G004130
SyntenyCmoCh02G004130
Gene Ontology termsGO:0006515 - protein quality control for misfolded or incompletely synthesized proteins (biological process)
GO:0009368 - endopeptidase Clp complex (cellular component)
GO:0009526 - plastid envelope (cellular component)
GO:0009570 - chloroplast stroma (cellular component)
GO:0004176 - ATP-dependent peptidase activity (molecular function)
GO:0004252 - serine-type endopeptidase activity (molecular function)
GO:0051117 - ATPase binding (molecular function)
InterPro domainsIPR001907 - ATP-dependent Clp protease proteolytic subunit
IPR023562 - Clp protease proteolytic subunit /Translocation-enhancing protein TepA
IPR029045 - ClpP/crotonase-like domain superfamily
IPR033135 - ClpP, histidine active site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605088.1 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]4.8e-14899.63Show/hide
Query:  MVVASAFTASLCFSVSSHNRASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGLSSKTVGAPLNLDEDFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNLS
        MVVASAFTASLCFSVSSHNRASSVPQLS RNSRRSIVSAIPRPYGDSSTIGLSSKTVGAPLNLDEDFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNLS
Subjt:  MVVASAFTASLCFSVSSHNRASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGLSSKTVGAPLNLDEDFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNLS

Query:  SVLFRNRIIFIGQPINSNVAQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIM
        SVLFRNRIIFIGQPINSNVAQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIM
Subjt:  SVLFRNRIIFIGQPINSNVAQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIM

Query:  IHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
        IHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
Subjt:  IHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY

XP_022948075.1 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic [Cucurbita moschata]9.7e-149100Show/hide
Query:  MVVASAFTASLCFSVSSHNRASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGLSSKTVGAPLNLDEDFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNLS
        MVVASAFTASLCFSVSSHNRASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGLSSKTVGAPLNLDEDFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNLS
Subjt:  MVVASAFTASLCFSVSSHNRASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGLSSKTVGAPLNLDEDFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNLS

Query:  SVLFRNRIIFIGQPINSNVAQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIM
        SVLFRNRIIFIGQPINSNVAQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIM
Subjt:  SVLFRNRIIFIGQPINSNVAQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIM

Query:  IHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
        IHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
Subjt:  IHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY

XP_023007112.1 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic [Cucurbita maxima]7.0e-14798.9Show/hide
Query:  MVVASAFTASLCFSVSSHNRASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGLSSKTVGAPLNLDEDFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNLS
        M VASAFTASLCFSVSSHNRASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGLSSKTVG PLNLDEDFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNLS
Subjt:  MVVASAFTASLCFSVSSHNRASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGLSSKTVGAPLNLDEDFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNLS

Query:  SVLFRNRIIFIGQPINSNVAQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIM
        SVLFRNRIIFIGQPINS VAQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIM
Subjt:  SVLFRNRIIFIGQPINSNVAQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIM

Query:  IHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
        IHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
Subjt:  IHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY

XP_023534664.1 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic [Cucurbita pepo subsp. pepo]3.8e-14598.17Show/hide
Query:  MVVASAFTASLCFSVSSHNRASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGLSSKTVGAPLNLDEDFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNLS
        M VASAFTASL FSVSSHNRASSVPQLSRRNSRRSIVSAIPRPYGDSSTIG S KTVGAPLNLDEDFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNLS
Subjt:  MVVASAFTASLCFSVSSHNRASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGLSSKTVGAPLNLDEDFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNLS

Query:  SVLFRNRIIFIGQPINSNVAQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIM
        SVLFRNRIIFIGQPINS VAQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIM
Subjt:  SVLFRNRIIFIGQPINSNVAQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIM

Query:  IHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
        IHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
Subjt:  IHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY

XP_038902836.1 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic isoform X1 [Benincasa hispida]1.9e-13691.24Show/hide
Query:  MVVASAFTASLCFSVSSHNRASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGLSSKTVGAPLNLDE-DFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNL
        M VASAFTASL FSVSSHNR SS+ QLSRRNS RSIVSA+PRPYGDSSTIGLSSKT+G PL++D+ DFLHTSTSYGPI A+KGNPPIMPAVMTPGGPL+L
Subjt:  MVVASAFTASLCFSVSSHNRASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGLSSKTVGAPLNLDE-DFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNL

Query:  SSVLFRNRIIFIGQPINSNVAQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
        SSVLFRNRIIFIGQP+NS VAQRVISQLVTLATIDE++DILVYLNCPGGSTYS+LAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
Subjt:  SSVLFRNRIIFIGQPINSNVAQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI

Query:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
        MIHQPQSGCGGHVEDVRRQVNEAVQSRHK+D MYAAFTGQP+EKVQQYTERDRFLSVSEALEFGLIDGVLETEY
Subjt:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY

TrEMBL top hitse value%identityAlignment
A0A0A0LLX4 ATP-dependent Clp protease proteolytic subunit1.6e-12886.86Show/hide
Query:  MVVASAFTASLCFSVSSHNRASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGLSSKTVGAPLNLDE-DFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNL
        MVVAS FTASL FSV+S+NRASS+ QLSRRNS RSIVSA PRPYGDSSTIGLSSKT GAPLNLD+ DFL TSTSY PI+A++ NPP+MPAVMTPGGPL+L
Subjt:  MVVASAFTASLCFSVSSHNRASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGLSSKTVGAPLNLDE-DFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNL

Query:  SSVLFRNRIIFIGQPINSNVAQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
        SSVLFRNRIIFIGQPINS VAQRVISQLVTLATIDE++DILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFG+ ASQGALLLAGGEKGMRYAMPNSRI
Subjt:  SSVLFRNRIIFIGQPINSNVAQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI

Query:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
        MIHQPQSGCGG VEDVRRQVNEAVQSR+K++ MYAAFTGQ +E +QQY +RDRFLSVSEAL+FGLIDGVLETEY
Subjt:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY

A0A1S3C7Y1 ATP-dependent Clp protease proteolytic subunit5.1e-13591.61Show/hide
Query:  MVVASAFTASLCFSVSSHNRASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGLSSKTVGAPLNLDE-DFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNL
        MVVAS FTASL FSV+S NR SS+PQLSRR S RSIVSA+PRPYGDSSTIGLSSKT GAPLNLD+ DFL TSTSYGPI A+KGNPPIMPAVMTPGGPL+L
Subjt:  MVVASAFTASLCFSVSSHNRASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGLSSKTVGAPLNLDE-DFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNL

Query:  SSVLFRNRIIFIGQPINSNVAQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
        SSVLFRNRIIFIGQP+NS VAQRVISQLVTLATIDE++DILVYLNCPGGSTYS+LAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
Subjt:  SSVLFRNRIIFIGQPINSNVAQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI

Query:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
        MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQ +EKVQQYTERDRFLSVSEALEFGLIDGVLETEY
Subjt:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY

A0A6J1D5M0 ATP-dependent Clp protease proteolytic subunit6.2e-13389.38Show/hide
Query:  VVASAFTASLCFSVSSHNRASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGLSSKTVGAPLNLDE-DFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNLS
        + ASAFTASL FSVSS+NR SS+P LSRRNS+RS+VS +PRPYGDSSTIGLSSK++ APL+LD+ DFLH STSY PI AKKGNPPIMPAVMTPGGPL+LS
Subjt:  VVASAFTASLCFSVSSHNRASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGLSSKTVGAPLNLDE-DFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNLS

Query:  SVLFRNRIIFIGQPINSNVAQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIM
        SVLFRNRIIFIGQP+NS VAQRVISQLVTLATIDE++DILVYLNCPGGSTYS+LAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIM
Subjt:  SVLFRNRIIFIGQPINSNVAQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIM

Query:  IHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
        IHQPQSGCGGHVEDVRRQVNEAVQSRHKVD M++AFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
Subjt:  IHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY

A0A6J1G8P9 ATP-dependent Clp protease proteolytic subunit4.7e-149100Show/hide
Query:  MVVASAFTASLCFSVSSHNRASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGLSSKTVGAPLNLDEDFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNLS
        MVVASAFTASLCFSVSSHNRASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGLSSKTVGAPLNLDEDFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNLS
Subjt:  MVVASAFTASLCFSVSSHNRASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGLSSKTVGAPLNLDEDFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNLS

Query:  SVLFRNRIIFIGQPINSNVAQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIM
        SVLFRNRIIFIGQPINSNVAQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIM
Subjt:  SVLFRNRIIFIGQPINSNVAQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIM

Query:  IHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
        IHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
Subjt:  IHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY

A0A6J1KXP8 ATP-dependent Clp protease proteolytic subunit3.4e-14798.9Show/hide
Query:  MVVASAFTASLCFSVSSHNRASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGLSSKTVGAPLNLDEDFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNLS
        M VASAFTASLCFSVSSHNRASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGLSSKTVG PLNLDEDFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNLS
Subjt:  MVVASAFTASLCFSVSSHNRASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGLSSKTVGAPLNLDEDFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNLS

Query:  SVLFRNRIIFIGQPINSNVAQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIM
        SVLFRNRIIFIGQPINS VAQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIM
Subjt:  SVLFRNRIIFIGQPINSNVAQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIM

Query:  IHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
        IHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
Subjt:  IHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY

SwissProt top hitse value%identityAlignment
P54415 ATP-dependent Clp protease proteolytic subunit 16.3e-4246.03Show/hide
Query:  IMPAVMTPGG----PLNLSSVLFRNRIIFIGQPINSNVAQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGAL
        ++P V+   G      ++ S L R RIIF+G+P+ S+VA R+++QL+ L   D E DI +Y+N PGGS Y  L I+D M+ I+P V TVC G+AAS GA 
Subjt:  IMPAVMTPGG----PLNLSSVLFRNRIIFIGQPINSNVAQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGAL

Query:  LLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLE
        LLA G KG R ++ +SRIMIHQP  G  G  +D+  Q NE +  +  ++ + A  TGQPL +++  T+RD F+S SEA+E+GLID V++
Subjt:  LLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLE

Q317Y6 ATP-dependent Clp protease proteolytic subunit 46.3e-4248.4Show/hide
Query:  MPAVMTPGG----PLNLSSVLFRNRIIFIGQPINSNVAQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGALL
        +P V+   G      ++ S L R RIIF+G  IN  V+  +++QL+ L   D E DI +Y+N PGGS  + +AIYD M  I P V T+CFGVAAS GA L
Subjt:  MPAVMTPGG----PLNLSSVLFRNRIIFIGQPINSNVAQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGALL

Query:  LAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLE
        L+GG KG R A+PNSRIMIHQP  G  G   ++  Q  E +  +  ++ + A  TGQPLEK+ + TERD FLS SEA+E+GLID V++
Subjt:  LAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLE

Q59993 ATP-dependent Clp protease proteolytic subunit 21.7e-4246Show/hide
Query:  PIMAKKGN--PPIMPAVMTPGG----PLNLSSVLFRNRIIFIGQPINSNVAQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGT
        P+    GN    ++P V+   G      ++ S L R RIIF+G P++  VA  +++QL+ L   D E DI +Y+N PGGS Y+ LAIYD M  I+P V T
Subjt:  PIMAKKGN--PPIMPAVMTPGG----PLNLSSVLFRNRIIFIGQPINSNVAQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGT

Query:  VCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVL
        +CFG+AAS GA LL+GG KG R A+P+SRIMIHQP  G  G   ++  Q  E +  + +++ M    TGQP+EK+Q+ TERD F+S  EA E+GLID V+
Subjt:  VCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVL

Q5N665 ATP-dependent Clp protease proteolytic subunit 16.3e-4246.03Show/hide
Query:  IMPAVMTPGG----PLNLSSVLFRNRIIFIGQPINSNVAQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGAL
        ++P V+   G      ++ S L R RIIF+G+P+ S+VA R+++QL+ L   D E DI +Y+N PGGS Y  L I+D M+ I+P V TVC G+AAS GA 
Subjt:  IMPAVMTPGG----PLNLSSVLFRNRIIFIGQPINSNVAQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGAL

Query:  LLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLE
        LLA G KG R ++ +SRIMIHQP  G  G  +D+  Q NE +  +  ++ + A  TGQPL +++  T+RD F+S SEA+E+GLID V++
Subjt:  LLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLE

Q9SAA2 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic1.0e-10875.38Show/hide
Query:  LCFSVSSHN-RASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGLSSKTVGAPLNLDEDFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNLSSVLFRNRII
        L FS  + N + +S    ++RN  R IVSA+  PYGDS   GLSS   G+P+ +D    + +  +G I AKKGNPP+MP+VMTPGGPL+LSSVLFRNRII
Subjt:  LCFSVSSHN-RASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGLSSKTVGAPLNLDEDFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNLSSVLFRNRII

Query:  FIGQPINSNVAQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCG
        FIGQPIN+ VAQRVISQLVTLA+ID++SDIL+YLNCPGGSTYS+LAIYDCMSWIKPKVGTV FGVAASQGALLLAGGEKGMRYAMPN+R+MIHQPQ+GCG
Subjt:  FIGQPINSNVAQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCG

Query:  GHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
        GHVEDVRRQVNEA+++R K+D MYAAFTGQPLEKVQQYTERDRFLS SEALEFGLIDG+LETEY
Subjt:  GHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY

Arabidopsis top hitse value%identityAlignment
AT1G02560.1 nuclear encoded CLP protease 53.6e-4042.79Show/hide
Query:  NLDEDFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNLSSVLFRNRIIFIGQPINSNVAQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMS
        ++ +D    S+ Y P  A+   PP M          ++ S LF+ RII  G  ++ ++A  +++QL+ L  +D   DI++Y+N PGGS  + +AI+D M 
Subjt:  NLDEDFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNLSSVLFRNRIIFIGQPINSNVAQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMS

Query:  WIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPLEKVQQYTERDRFLSVSEALE
         I+P V TVC G+AAS GA LL+ G KG RY++PNSRIMIHQP  G  G   D+  Q NE +  +  ++   A  TGQ LEK+ Q T+RD F+S  EA E
Subjt:  WIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPLEKVQQYTERDRFLSVSEALE

Query:  FGLIDGVL
        +GLIDGV+
Subjt:  FGLIDGVL

AT1G11750.1 CLP protease proteolytic subunit 67.3e-11075.38Show/hide
Query:  LCFSVSSHN-RASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGLSSKTVGAPLNLDEDFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNLSSVLFRNRII
        L FS  + N + +S    ++RN  R IVSA+  PYGDS   GLSS   G+P+ +D    + +  +G I AKKGNPP+MP+VMTPGGPL+LSSVLFRNRII
Subjt:  LCFSVSSHN-RASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGLSSKTVGAPLNLDEDFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNLSSVLFRNRII

Query:  FIGQPINSNVAQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCG
        FIGQPIN+ VAQRVISQLVTLA+ID++SDIL+YLNCPGGSTYS+LAIYDCMSWIKPKVGTV FGVAASQGALLLAGGEKGMRYAMPN+R+MIHQPQ+GCG
Subjt:  FIGQPINSNVAQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCG

Query:  GHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
        GHVEDVRRQVNEA+++R K+D MYAAFTGQPLEKVQQYTERDRFLS SEALEFGLIDG+LETEY
Subjt:  GHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY

AT1G11750.2 CLP protease proteolytic subunit 61.6e-10973.02Show/hide
Query:  LCFSVSSHN-RASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGLSSKTVGAPLNLDE-----------DFLHTSTSY---GPIMAKKGNPPIMPAVMTPGG
        L FS  + N + +S    ++RN  R IVSA+  PYGDS   GLSS   G+P+ +D            + L +ST Y   G I AKKGNPP+MP+VMTPGG
Subjt:  LCFSVSSHN-RASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGLSSKTVGAPLNLDE-----------DFLHTSTSY---GPIMAKKGNPPIMPAVMTPGG

Query:  PLNLSSVLFRNRIIFIGQPINSNVAQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMP
        PL+LSSVLFRNRIIFIGQPIN+ VAQRVISQLVTLA+ID++SDIL+YLNCPGGSTYS+LAIYDCMSWIKPKVGTV FGVAASQGALLLAGGEKGMRYAMP
Subjt:  PLNLSSVLFRNRIIFIGQPINSNVAQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMP

Query:  NSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY
        N+R+MIHQPQ+GCGGHVEDVRRQVNEA+++R K+D MYAAFTGQPLEKVQQYTERDRFLS SEALEFGLIDG+LETEY
Subjt:  NSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY

AT1G66670.1 CLP protease proteolytic subunit 39.7e-3843.1Show/hide
Query:  LNLSSVLFRNRIIFIGQPINSNVAQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPN
        L+ +++L R RI+F+G  ++   A  VISQL+ L   D E DI +++N PGGS  + + IYD M   K  V TVC G+AAS GA LLA G KG RY MPN
Subjt:  LNLSSVLFRNRIIFIGQPINSNVAQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPN

Query:  SRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLE
        S++MIHQP    GG   ++  ++ E +  + K++ +++  TG+P  +++  T+RD FL+  EA E+GLID V++
Subjt:  SRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLE

AT5G45390.1 CLP protease P44.1e-3640.68Show/hide
Query:  GGPLNLSSVLFRNRIIFIGQPINSNVAQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYA
        G   ++  +L R RI+F+G  I+  VA  ++SQL+ L   D + DI +++N PGGS  + +AIYD +  ++  V T+  G+AAS  +++L  G KG R+A
Subjt:  GGPLNLSSVLFRNRIIFIGQPINSNVAQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYA

Query:  MPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLE
        MPN+RIMIHQP  G  G   DV  Q  E + +++ V  + A  T +  E+V +  +RDR++S  EA+E+GLIDGV++
Subjt:  MPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGTAGCTTCAGCTTTTACTGCATCTCTCTGTTTCTCTGTCTCTTCGCACAATAGAGCATCTTCCGTTCCTCAGCTTTCTCGCCGAAATTCACGCAGGTCGATAGT
TTCTGCCATCCCGAGACCGTATGGAGACTCTTCAACAATTGGATTATCGAGCAAAACAGTTGGGGCACCTTTAAACCTCGACGAAGATTTTCTTCACACCAGTACAAGTT
ATGGACCTATAATGGCCAAGAAAGGCAATCCACCAATTATGCCTGCAGTGATGACACCAGGAGGGCCTTTGAATCTCTCTTCTGTGTTATTTAGGAATCGTATCATATTT
ATTGGTCAACCCATCAACTCCAACGTTGCACAGCGAGTTATATCACAGCTTGTGACACTAGCAACCATTGATGAGGAGTCGGATATCCTGGTATATCTGAATTGCCCTGG
TGGAAGTACCTACTCAATATTAGCAATTTATGATTGCATGTCTTGGATAAAGCCTAAGGTTGGCACAGTGTGCTTCGGAGTTGCTGCAAGCCAAGGGGCTCTTCTCCTTG
CAGGTGGAGAAAAGGGAATGCGCTATGCTATGCCAAATTCTCGAATTATGATACATCAGCCACAAAGTGGATGTGGGGGTCATGTGGAAGATGTTAGACGCCAAGTCAAT
GAAGCAGTTCAATCACGCCATAAAGTTGACATGATGTATGCTGCATTTACTGGCCAACCATTAGAGAAAGTACAACAATACACGGAGAGGGATCGGTTTTTATCTGTTTC
TGAGGCTTTGGAGTTTGGGCTTATCGACGGTGTGCTCGAAACAGAATACTGA
mRNA sequenceShow/hide mRNA sequence
TAGTCAGTGAAGCTCGAGAACGCAGCGCCATTCCCACAAGCTTTGCTCGCCATGGTAGTAGCTTCAGCTTTTACTGCATCTCTCTGTTTCTCTGTCTCTTCGCACAATAG
AGCATCTTCCGTTCCTCAGCTTTCTCGCCGAAATTCACGCAGGTCGATAGTTTCTGCCATCCCGAGACCGTATGGAGACTCTTCAACAATTGGATTATCGAGCAAAACAG
TTGGGGCACCTTTAAACCTCGACGAAGATTTTCTTCACACCAGTACAAGTTATGGACCTATAATGGCCAAGAAAGGCAATCCACCAATTATGCCTGCAGTGATGACACCA
GGAGGGCCTTTGAATCTCTCTTCTGTGTTATTTAGGAATCGTATCATATTTATTGGTCAACCCATCAACTCCAACGTTGCACAGCGAGTTATATCACAGCTTGTGACACT
AGCAACCATTGATGAGGAGTCGGATATCCTGGTATATCTGAATTGCCCTGGTGGAAGTACCTACTCAATATTAGCAATTTATGATTGCATGTCTTGGATAAAGCCTAAGG
TTGGCACAGTGTGCTTCGGAGTTGCTGCAAGCCAAGGGGCTCTTCTCCTTGCAGGTGGAGAAAAGGGAATGCGCTATGCTATGCCAAATTCTCGAATTATGATACATCAG
CCACAAAGTGGATGTGGGGGTCATGTGGAAGATGTTAGACGCCAAGTCAATGAAGCAGTTCAATCACGCCATAAAGTTGACATGATGTATGCTGCATTTACTGGCCAACC
ATTAGAGAAAGTACAACAATACACGGAGAGGGATCGGTTTTTATCTGTTTCTGAGGCTTTGGAGTTTGGGCTTATCGACGGTGTGCTCGAAACAGAATACTGAGCTTGGA
TTTGGCGAACTCTGATCATTCATCTGCACTATACAGTGCTTTGATTATGCAGAACTTAACTTCTGAATGCGGCTCATCCATGCTTTGATACAGAACAATCAAATTTTCAG
GCACGTGCATCTTTTCACTGGTAAACTCTCAAATCCTCCCCGAATCAATGCACATGAGCTGGTATTTGAGAACACAATGATATTATTTGTGATATTATTTGCAGCCATGT
CGATATTTAGTGTCATTCTTGTCAAAATTCCTGCTTCAAATTGTCTTCTTGGACTGTCACCTTGGCTAGGGCCTGAACATGATTAGAGTATACTGAAATCATGATTGAAA
GCTACGGTCAGATTTAAGATTGTCTTTTTAAATAAGACTACTTTGAACTGCATGGTACCTTATTATCTACACTGTTTTTGTCTATAAAATATATTGTCATAAATAACTAT
TCGATTTTTTATTTTTGGTCTCTGAAAATTAAGCTTGTAAAGACTATTTCTACCTTAAAAAGTTGAC
Protein sequenceShow/hide protein sequence
MVVASAFTASLCFSVSSHNRASSVPQLSRRNSRRSIVSAIPRPYGDSSTIGLSSKTVGAPLNLDEDFLHTSTSYGPIMAKKGNPPIMPAVMTPGGPLNLSSVLFRNRIIF
IGQPINSNVAQRVISQLVTLATIDEESDILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVN
EAVQSRHKVDMMYAAFTGQPLEKVQQYTERDRFLSVSEALEFGLIDGVLETEY