CuGenDBv2

Gene ID	CmoCh02G004400
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	zinc finger CCCH domain-containing protein 38 isoform X2
Genome location	Cmo_Chr02:2307539..2308483
RNA-Seq Expression	CmoCh02G004400
Synteny	CmoCh02G004400
Gene Ontology terms	GO:0003677 - DNA binding (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6604278.1 Zinc finger CCCH domain-containing protein 38, partial [Cucurbita argyrosperma subsp. sororia]

1.4e-110

87.11

Show/hide

Query:  NIVTNDQIRQITDLSASLAQYFGNAQPLPQLYASLNTHTVSEAPSFPYSDAPMGALGAAMKTGPVIESSKQHDSALCNSLQLKKLEVTKTPQKSTTEVKG
        NIVTNDQIRQITDLSASLAQYFGNAQPLPQLYASLNTHTVSEAPSFPYSDAPMGALGAAMKTGPVIESSKQHDSALCNSLQLKKLEVTKTP+KSTTEVKG
Subjt:  NIVTNDQIRQITDLSASLAQYFGNAQPLPQLYASLNTHTVSEAPSFPYSDAPMGALGAAMKTGPVIESSKQHDSALCNSLQLKKLEVTKTPQKSTTEVKG

Query:  EVQIPNLPLSSGPCGISAEETLHGKPTVDGDAIKEK-------NETDPATNEDSQKIDTTENANGNDEVHDKKKSKDEICTCG-----------VCQGTS
        EVQIPNLPLSSGPCGISAEETLHGKPTVDGDAIKEK       N+TDPATNEDSQKIDTTENANGNDEVHDKKKSKD   T G           V +   
Subjt:  EVQIPNLPLSSGPCGISAEETLHGKPTVDGDAIKEK-------NETDPATNEDSQKIDTTENANGNDEVHDKKKSKDEICTCG-----------VCQGTS

Query:  KTYMEGHISKDFYKTIVKKVVDKVTGSLQDGHIPQTQEKIDHYLSFSKSKLTKLVQ
         T+ EGHISKD YKTIVKKVVDKVTGSLQDGHIPQTQEKIDHYLSFSKSKLTKLVQ
Subjt:  KTYMEGHISKDFYKTIVKKVVDKVTGSLQDGHIPQTQEKIDHYLSFSKSKLTKLVQ

XP_022949979.1 zinc finger CCCH domain-containing protein 38 isoform X2 [Cucurbita moschata]

6.3e-108

82.95

Show/hide

Query:  NIVTNDQIRQITDLSASLAQYFGNAQPLPQLYASLNTHTVSEAPSFPYSDAPMGALGAAMKTGPVIESSKQHDSALCNSLQLKKLEVTKTPQKSTTEVKG
        NIVTNDQIRQITDLSASLAQYFGNAQPLPQLYASLNTH+VSEAPSFPYSDAPMGALGA+MKT PVIESSKQHDSALCNSLQLKK+EVTKTPQKSTTEVKG
Subjt:  NIVTNDQIRQITDLSASLAQYFGNAQPLPQLYASLNTHTVSEAPSFPYSDAPMGALGAAMKTGPVIESSKQHDSALCNSLQLKKLEVTKTPQKSTTEVKG

Query:  EVQIPNLPLSSGPCGISAEETLHGKPTVDGDAIKEK-------NETDPATNEDSQKIDTTENANGNDEVHDKKKSKDEICTCG-----------VCQGTS
        EVQIPNLPLSSGPCGISAEETLHGKPT DGDAIKEK       N+T PATNEDSQKIDTTENANGNDEVHDKKKSKD   T G           V +   
Subjt:  EVQIPNLPLSSGPCGISAEETLHGKPTVDGDAIKEK-------NETDPATNEDSQKIDTTENANGNDEVHDKKKSKDEICTCG-----------VCQGTS

Query:  KTYMEGHISKDFYKTIVKKVVDKVTGSLQDGHIPQTQEKIDHYLSFSKSKLTKLVQKRLLHLFE
         T+ EGHISKD YKTIVKKVVDKVTGSLQDGHIPQTQEKIDHYLSFSKSKLTKLVQ  ++H+ +
Subjt:  KTYMEGHISKDFYKTIVKKVVDKVTGSLQDGHIPQTQEKIDHYLSFSKSKLTKLVQKRLLHLFE

XP_022949980.1 zinc finger CCCH domain-containing protein 38 isoform X3 [Cucurbita moschata]

4.8e-108

85.16

Show/hide

Query:  NIVTNDQIRQITDLSASLAQYFGNAQPLPQLYASLNTHTVSEAPSFPYSDAPMGALGAAMKTGPVIESSKQHDSALCNSLQLKKLEVTKTPQKSTTEVKG
        NIVTNDQIRQITDLSASLAQYFGNAQPLPQLYASLNTH+VSEAPSFPYSDAPMGALGA+MKT PVIESSKQHDSALCNSLQLKK+EVTKTPQKSTTEVKG
Subjt:  NIVTNDQIRQITDLSASLAQYFGNAQPLPQLYASLNTHTVSEAPSFPYSDAPMGALGAAMKTGPVIESSKQHDSALCNSLQLKKLEVTKTPQKSTTEVKG

Query:  EVQIPNLPLSSGPCGISAEETLHGKPTVDGDAIKEK-------NETDPATNEDSQKIDTTENANGNDEVHDKKKSKDEICTCG-----------VCQGTS
        EVQIPNLPLSSGPCGISAEETLHGKPT DGDAIKEK       N+T PATNEDSQKIDTTENANGNDEVHDKKKSKD   T G           V +   
Subjt:  EVQIPNLPLSSGPCGISAEETLHGKPTVDGDAIKEK-------NETDPATNEDSQKIDTTENANGNDEVHDKKKSKDEICTCG-----------VCQGTS

Query:  KTYMEGHISKDFYKTIVKKVVDKVTGSLQDGHIPQTQEKIDHYLSFSKSKLTKLVQ
         T+ EGHISKD YKTIVKKVVDKVTGSLQDGHIPQTQEKIDHYLSFSKSKLTKLVQ
Subjt:  KTYMEGHISKDFYKTIVKKVVDKVTGSLQDGHIPQTQEKIDHYLSFSKSKLTKLVQ

XP_022949981.1 zinc finger CCCH domain-containing protein 38 isoform X4 [Cucurbita moschata]

6.3e-108

82.95

Show/hide

Query:  NIVTNDQIRQITDLSASLAQYFGNAQPLPQLYASLNTHTVSEAPSFPYSDAPMGALGAAMKTGPVIESSKQHDSALCNSLQLKKLEVTKTPQKSTTEVKG
        NIVTNDQIRQITDLSASLAQYFGNAQPLPQLYASLNTH+VSEAPSFPYSDAPMGALGA+MKT PVIESSKQHDSALCNSLQLKK+EVTKTPQKSTTEVKG
Subjt:  NIVTNDQIRQITDLSASLAQYFGNAQPLPQLYASLNTHTVSEAPSFPYSDAPMGALGAAMKTGPVIESSKQHDSALCNSLQLKKLEVTKTPQKSTTEVKG

Query:  EVQIPNLPLSSGPCGISAEETLHGKPTVDGDAIKEK-------NETDPATNEDSQKIDTTENANGNDEVHDKKKSKDEICTCG-----------VCQGTS
        EVQIPNLPLSSGPCGISAEETLHGKPT DGDAIKEK       N+T PATNEDSQKIDTTENANGNDEVHDKKKSKD   T G           V +   
Subjt:  EVQIPNLPLSSGPCGISAEETLHGKPTVDGDAIKEK-------NETDPATNEDSQKIDTTENANGNDEVHDKKKSKDEICTCG-----------VCQGTS

Query:  KTYMEGHISKDFYKTIVKKVVDKVTGSLQDGHIPQTQEKIDHYLSFSKSKLTKLVQKRLLHLFE
         T+ EGHISKD YKTIVKKVVDKVTGSLQDGHIPQTQEKIDHYLSFSKSKLTKLVQ  ++H+ +
Subjt:  KTYMEGHISKDFYKTIVKKVVDKVTGSLQDGHIPQTQEKIDHYLSFSKSKLTKLVQKRLLHLFE

XP_022949982.1 zinc finger CCCH domain-containing protein 38 isoform X5 [Cucurbita moschata]

6.3e-108

82.95

Show/hide

Query:  NIVTNDQIRQITDLSASLAQYFGNAQPLPQLYASLNTHTVSEAPSFPYSDAPMGALGAAMKTGPVIESSKQHDSALCNSLQLKKLEVTKTPQKSTTEVKG
        NIVTNDQIRQITDLSASLAQYFGNAQPLPQLYASLNTH+VSEAPSFPYSDAPMGALGA+MKT PVIESSKQHDSALCNSLQLKK+EVTKTPQKSTTEVKG
Subjt:  NIVTNDQIRQITDLSASLAQYFGNAQPLPQLYASLNTHTVSEAPSFPYSDAPMGALGAAMKTGPVIESSKQHDSALCNSLQLKKLEVTKTPQKSTTEVKG

Query:  EVQIPNLPLSSGPCGISAEETLHGKPTVDGDAIKEK-------NETDPATNEDSQKIDTTENANGNDEVHDKKKSKDEICTCG-----------VCQGTS
        EVQIPNLPLSSGPCGISAEETLHGKPT DGDAIKEK       N+T PATNEDSQKIDTTENANGNDEVHDKKKSKD   T G           V +   
Subjt:  EVQIPNLPLSSGPCGISAEETLHGKPTVDGDAIKEK-------NETDPATNEDSQKIDTTENANGNDEVHDKKKSKDEICTCG-----------VCQGTS

Query:  KTYMEGHISKDFYKTIVKKVVDKVTGSLQDGHIPQTQEKIDHYLSFSKSKLTKLVQKRLLHLFE
         T+ EGHISKD YKTIVKKVVDKVTGSLQDGHIPQTQEKIDHYLSFSKSKLTKLVQ  ++H+ +
Subjt:  KTYMEGHISKDFYKTIVKKVVDKVTGSLQDGHIPQTQEKIDHYLSFSKSKLTKLVQKRLLHLFE

TrEMBL top hits

e value

%identity

Alignment

A0A6J1GDJ5 zinc finger CCCH domain-containing protein 38 isoform X4

3.0e-108

82.95

Show/hide

Query:  NIVTNDQIRQITDLSASLAQYFGNAQPLPQLYASLNTHTVSEAPSFPYSDAPMGALGAAMKTGPVIESSKQHDSALCNSLQLKKLEVTKTPQKSTTEVKG
        NIVTNDQIRQITDLSASLAQYFGNAQPLPQLYASLNTH+VSEAPSFPYSDAPMGALGA+MKT PVIESSKQHDSALCNSLQLKK+EVTKTPQKSTTEVKG
Subjt:  NIVTNDQIRQITDLSASLAQYFGNAQPLPQLYASLNTHTVSEAPSFPYSDAPMGALGAAMKTGPVIESSKQHDSALCNSLQLKKLEVTKTPQKSTTEVKG

Query:  EVQIPNLPLSSGPCGISAEETLHGKPTVDGDAIKEK-------NETDPATNEDSQKIDTTENANGNDEVHDKKKSKDEICTCG-----------VCQGTS
        EVQIPNLPLSSGPCGISAEETLHGKPT DGDAIKEK       N+T PATNEDSQKIDTTENANGNDEVHDKKKSKD   T G           V +   
Subjt:  EVQIPNLPLSSGPCGISAEETLHGKPTVDGDAIKEK-------NETDPATNEDSQKIDTTENANGNDEVHDKKKSKDEICTCG-----------VCQGTS

Query:  KTYMEGHISKDFYKTIVKKVVDKVTGSLQDGHIPQTQEKIDHYLSFSKSKLTKLVQKRLLHLFE
         T+ EGHISKD YKTIVKKVVDKVTGSLQDGHIPQTQEKIDHYLSFSKSKLTKLVQ  ++H+ +
Subjt:  KTYMEGHISKDFYKTIVKKVVDKVTGSLQDGHIPQTQEKIDHYLSFSKSKLTKLVQKRLLHLFE

A0A6J1GDK5 zinc finger CCCH domain-containing protein 38 isoform X5

3.0e-108

82.95

Show/hide

Query:  NIVTNDQIRQITDLSASLAQYFGNAQPLPQLYASLNTHTVSEAPSFPYSDAPMGALGAAMKTGPVIESSKQHDSALCNSLQLKKLEVTKTPQKSTTEVKG
        NIVTNDQIRQITDLSASLAQYFGNAQPLPQLYASLNTH+VSEAPSFPYSDAPMGALGA+MKT PVIESSKQHDSALCNSLQLKK+EVTKTPQKSTTEVKG
Subjt:  NIVTNDQIRQITDLSASLAQYFGNAQPLPQLYASLNTHTVSEAPSFPYSDAPMGALGAAMKTGPVIESSKQHDSALCNSLQLKKLEVTKTPQKSTTEVKG

Query:  EVQIPNLPLSSGPCGISAEETLHGKPTVDGDAIKEK-------NETDPATNEDSQKIDTTENANGNDEVHDKKKSKDEICTCG-----------VCQGTS
        EVQIPNLPLSSGPCGISAEETLHGKPT DGDAIKEK       N+T PATNEDSQKIDTTENANGNDEVHDKKKSKD   T G           V +   
Subjt:  EVQIPNLPLSSGPCGISAEETLHGKPTVDGDAIKEK-------NETDPATNEDSQKIDTTENANGNDEVHDKKKSKDEICTCG-----------VCQGTS

Query:  KTYMEGHISKDFYKTIVKKVVDKVTGSLQDGHIPQTQEKIDHYLSFSKSKLTKLVQKRLLHLFE
         T+ EGHISKD YKTIVKKVVDKVTGSLQDGHIPQTQEKIDHYLSFSKSKLTKLVQ  ++H+ +
Subjt:  KTYMEGHISKDFYKTIVKKVVDKVTGSLQDGHIPQTQEKIDHYLSFSKSKLTKLVQKRLLHLFE

A0A6J1GEA4 zinc finger CCCH domain-containing protein 38 isoform X1

3.0e-108

82.95

Show/hide

Query:  NIVTNDQIRQITDLSASLAQYFGNAQPLPQLYASLNTHTVSEAPSFPYSDAPMGALGAAMKTGPVIESSKQHDSALCNSLQLKKLEVTKTPQKSTTEVKG
        NIVTNDQIRQITDLSASLAQYFGNAQPLPQLYASLNTH+VSEAPSFPYSDAPMGALGA+MKT PVIESSKQHDSALCNSLQLKK+EVTKTPQKSTTEVKG
Subjt:  NIVTNDQIRQITDLSASLAQYFGNAQPLPQLYASLNTHTVSEAPSFPYSDAPMGALGAAMKTGPVIESSKQHDSALCNSLQLKKLEVTKTPQKSTTEVKG

Query:  EVQIPNLPLSSGPCGISAEETLHGKPTVDGDAIKEK-------NETDPATNEDSQKIDTTENANGNDEVHDKKKSKDEICTCG-----------VCQGTS
        EVQIPNLPLSSGPCGISAEETLHGKPT DGDAIKEK       N+T PATNEDSQKIDTTENANGNDEVHDKKKSKD   T G           V +   
Subjt:  EVQIPNLPLSSGPCGISAEETLHGKPTVDGDAIKEK-------NETDPATNEDSQKIDTTENANGNDEVHDKKKSKDEICTCG-----------VCQGTS

Query:  KTYMEGHISKDFYKTIVKKVVDKVTGSLQDGHIPQTQEKIDHYLSFSKSKLTKLVQKRLLHLFE
         T+ EGHISKD YKTIVKKVVDKVTGSLQDGHIPQTQEKIDHYLSFSKSKLTKLVQ  ++H+ +
Subjt:  KTYMEGHISKDFYKTIVKKVVDKVTGSLQDGHIPQTQEKIDHYLSFSKSKLTKLVQKRLLHLFE

A0A6J1GEA9 zinc finger CCCH domain-containing protein 38 isoform X3

2.3e-108

85.16

Show/hide

Query:  NIVTNDQIRQITDLSASLAQYFGNAQPLPQLYASLNTHTVSEAPSFPYSDAPMGALGAAMKTGPVIESSKQHDSALCNSLQLKKLEVTKTPQKSTTEVKG
        NIVTNDQIRQITDLSASLAQYFGNAQPLPQLYASLNTH+VSEAPSFPYSDAPMGALGA+MKT PVIESSKQHDSALCNSLQLKK+EVTKTPQKSTTEVKG
Subjt:  NIVTNDQIRQITDLSASLAQYFGNAQPLPQLYASLNTHTVSEAPSFPYSDAPMGALGAAMKTGPVIESSKQHDSALCNSLQLKKLEVTKTPQKSTTEVKG

Query:  EVQIPNLPLSSGPCGISAEETLHGKPTVDGDAIKEK-------NETDPATNEDSQKIDTTENANGNDEVHDKKKSKDEICTCG-----------VCQGTS
        EVQIPNLPLSSGPCGISAEETLHGKPT DGDAIKEK       N+T PATNEDSQKIDTTENANGNDEVHDKKKSKD   T G           V +   
Subjt:  EVQIPNLPLSSGPCGISAEETLHGKPTVDGDAIKEK-------NETDPATNEDSQKIDTTENANGNDEVHDKKKSKDEICTCG-----------VCQGTS

Query:  KTYMEGHISKDFYKTIVKKVVDKVTGSLQDGHIPQTQEKIDHYLSFSKSKLTKLVQ
         T+ EGHISKD YKTIVKKVVDKVTGSLQDGHIPQTQEKIDHYLSFSKSKLTKLVQ
Subjt:  KTYMEGHISKDFYKTIVKKVVDKVTGSLQDGHIPQTQEKIDHYLSFSKSKLTKLVQ

A0A6J1GEH4 zinc finger CCCH domain-containing protein 38 isoform X2

3.0e-108

82.95

Show/hide

Query:  NIVTNDQIRQITDLSASLAQYFGNAQPLPQLYASLNTHTVSEAPSFPYSDAPMGALGAAMKTGPVIESSKQHDSALCNSLQLKKLEVTKTPQKSTTEVKG
        NIVTNDQIRQITDLSASLAQYFGNAQPLPQLYASLNTH+VSEAPSFPYSDAPMGALGA+MKT PVIESSKQHDSALCNSLQLKK+EVTKTPQKSTTEVKG
Subjt:  NIVTNDQIRQITDLSASLAQYFGNAQPLPQLYASLNTHTVSEAPSFPYSDAPMGALGAAMKTGPVIESSKQHDSALCNSLQLKKLEVTKTPQKSTTEVKG

Query:  EVQIPNLPLSSGPCGISAEETLHGKPTVDGDAIKEK-------NETDPATNEDSQKIDTTENANGNDEVHDKKKSKDEICTCG-----------VCQGTS
        EVQIPNLPLSSGPCGISAEETLHGKPT DGDAIKEK       N+T PATNEDSQKIDTTENANGNDEVHDKKKSKD   T G           V +   
Subjt:  EVQIPNLPLSSGPCGISAEETLHGKPTVDGDAIKEK-------NETDPATNEDSQKIDTTENANGNDEVHDKKKSKDEICTCG-----------VCQGTS

Query:  KTYMEGHISKDFYKTIVKKVVDKVTGSLQDGHIPQTQEKIDHYLSFSKSKLTKLVQKRLLHLFE
         T+ EGHISKD YKTIVKKVVDKVTGSLQDGHIPQTQEKIDHYLSFSKSKLTKLVQ  ++H+ +
Subjt:  KTYMEGHISKDFYKTIVKKVVDKVTGSLQDGHIPQTQEKIDHYLSFSKSKLTKLVQKRLLHLFE

SwissProt top hits

e value

%identity

Alignment

Q6YYC0 Zinc finger CCCH domain-containing protein 55

1.1e-11

43.8

Show/hide

Query:  PTVDGDAIKEKNETDPATNEDSQKIDTTENANGNDEVHDKKKSKDE--------ICTCGVCQGTSKTYMEGHISKDFYKTIVKKVVDKVTGSLQDGHIPQ
        PTV   A+   NET PA N+  +  DT   AN + E    KKSKD              V      T+ EG +S++ +KTIVKKVVDKVT +++  + PQ
Subjt:  PTVDGDAIKEKNETDPATNEDSQKIDTTENANGNDEVHDKKKSKDE--------ICTCGVCQGTSKTYMEGHISKDFYKTIVKKVVDKVTGSLQDGHIPQ

Query:  TQEKIDHYLSFSKSKLTKLVQ
        T+EKID Y+S+S+ KL KLVQ
Subjt:  TQEKIDHYLSFSKSKLTKLVQ

Q9LIH5 Zinc finger CCCH domain-containing protein 38

1.6e-21

33.58

Show/hide

Query:  SNCRRRMKASNIVTNDQIRQITDLSASLAQYFGNAQPLPQLYASLN--THTVSEAP------SFPYSDAPMGALGAAMKTG----PVIESSKQHDSALCN
        S   + +   N V+ +QI QIT++SASLAQ+  N QP+PQL  +L    H+ S  P      S   S  P    G  M TG    P + +SK  +     
Subjt:  SNCRRRMKASNIVTNDQIRQITDLSASLAQYFGNAQPLPQLYASLN--THTVSEAP------SFPYSDAPMGALGAAMKTG----PVIESSKQHDSALCN

Query:  SLQLKKLEVTKTPQKSTTEVKGEVQIPNLPLSSGPCGISAEETLHGKPTVDGDAIKEKNETDPATNEDSQKIDTTENANGNDEVHDKKKSKD-------E
         +Q   L+  +   K T E   E                                +E  +T   TN+    +D  E+ + +    + KK KD       +
Subjt:  SLQLKKLEVTKTPQKSTTEVKGEVQIPNLPLSSGPCGISAEETLHGKPTVDGDAIKEKNETDPATNEDSQKIDTTENANGNDEVHDKKKSKD-------E

Query:  ICTCGVCQGTSK-TYMEGHISKDFYKTIVKKVVDKVTGSLQDGHIPQTQEKIDHYLSFSKSKLTKLVQ
             V +   K  + EG ++KD YK IVKKV +KVTG++Q G++PQTQEKIDHYLS SK KLTKLVQ
Subjt:  ICTCGVCQGTSK-TYMEGHISKDFYKTIVKKVVDKVTGSLQDGHIPQTQEKIDHYLSFSKSKLTKLVQ

Arabidopsis top hits

e value

%identity

Alignment

AT3G18640.1 Zinc finger C-x8-C-x5-C-x3-H type family protein

1.1e-22

33.58

Show/hide

Query:  SNCRRRMKASNIVTNDQIRQITDLSASLAQYFGNAQPLPQLYASLN--THTVSEAP------SFPYSDAPMGALGAAMKTG----PVIESSKQHDSALCN
        S   + +   N V+ +QI QIT++SASLAQ+  N QP+PQL  +L    H+ S  P      S   S  P    G  M TG    P + +SK  +     
Subjt:  SNCRRRMKASNIVTNDQIRQITDLSASLAQYFGNAQPLPQLYASLN--THTVSEAP------SFPYSDAPMGALGAAMKTG----PVIESSKQHDSALCN

Query:  SLQLKKLEVTKTPQKSTTEVKGEVQIPNLPLSSGPCGISAEETLHGKPTVDGDAIKEKNETDPATNEDSQKIDTTENANGNDEVHDKKKSKD-------E
         +Q   L+  +   K T E   E                                +E  +T   TN+    +D  E+ + +    + KK KD       +
Subjt:  SLQLKKLEVTKTPQKSTTEVKGEVQIPNLPLSSGPCGISAEETLHGKPTVDGDAIKEKNETDPATNEDSQKIDTTENANGNDEVHDKKKSKD-------E

Query:  ICTCGVCQGTSK-TYMEGHISKDFYKTIVKKVVDKVTGSLQDGHIPQTQEKIDHYLSFSKSKLTKLVQ
             V +   K  + EG ++KD YK IVKKV +KVTG++Q G++PQTQEKIDHYLS SK KLTKLVQ
Subjt:  ICTCGVCQGTSK-TYMEGHISKDFYKTIVKKVVDKVTGSLQDGHIPQTQEKIDHYLSFSKSKLTKLVQ

AT3G26850.1 histone-lysine N-methyltransferases

2.2e-10

27.17

Show/hide

Query:  LCNSLQLKKLEVTKTPQKSTTEVKGEVQIPNLPLSSGPCGISAEETLHGKPTVDGDAIKEKNETDPATNEDSQKIDTTENANGNDEVHDKKKSKDE----
        LC S    ++ V+        E    ++I  +        +S E+   GK   DG          P ++ ++ K++   +   N     ++KSK+     
Subjt:  LCNSLQLKKLEVTKTPQKSTTEVKGEVQIPNLPLSSGPCGISAEETLHGKPTVDGDAIKEKNETDPATNEDSQKIDTTENANGNDEVHDKKKSKDE----

Query:  -------ICTCGVCQGTSKTYMEGHISKDFYKTIVKKVVDKVTGSLQDGHIPQTQEKIDHYLSFSKSKLTKLV
               + T  V      ++ +G++SK+ +KTIVK+VVDKV+ S++   IP+++ KID Y+  S+ KLTKLV
Subjt:  -------ICTCGVCQGTSKTYMEGHISKDFYKTIVKKVVDKVTGSLQDGHIPQTQEKIDHYLSFSKSKLTKLV

AT3G26850.2 histone-lysine N-methyltransferases

2.2e-10

27.17

Show/hide

Query:  LCNSLQLKKLEVTKTPQKSTTEVKGEVQIPNLPLSSGPCGISAEETLHGKPTVDGDAIKEKNETDPATNEDSQKIDTTENANGNDEVHDKKKSKDE----
        LC S    ++ V+        E    ++I  +        +S E+   GK   DG          P ++ ++ K++   +   N     ++KSK+     
Subjt:  LCNSLQLKKLEVTKTPQKSTTEVKGEVQIPNLPLSSGPCGISAEETLHGKPTVDGDAIKEKNETDPATNEDSQKIDTTENANGNDEVHDKKKSKDE----

Query:  -------ICTCGVCQGTSKTYMEGHISKDFYKTIVKKVVDKVTGSLQDGHIPQTQEKIDHYLSFSKSKLTKLV
               + T  V      ++ +G++SK+ +KTIVK+VVDKV+ S++   IP+++ KID Y+  S+ KLTKLV
Subjt:  -------ICTCGVCQGTSKTYMEGHISKDFYKTIVKKVVDKVTGSLQDGHIPQTQEKIDHYLSFSKSKLTKLV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAAATTTCAGAGTCAAACTGCAGAAGGAGGATGAAAGCATCGAACATAGTAACGAACGATCAAATTAGGCAAATAACTGACCTTTCAGCTTCTCTTGCACAATATTT
TGGAAATGCGCAACCATTGCCTCAATTGTATGCCTCCCTTAATACGCATACTGTGTCAGAAGCACCTTCATTCCCTTATTCGGACGCACCCATGGGTGCTTTGGGGGCAG
CGATGAAGACAGGTCCTGTTATTGAATCCTCAAAGCAACACGATTCTGCTCTCTGCAATAGCTTACAGCTGAAGAAACTTGAAGTCACTAAAACACCACAGAAGAGCACT
ACAGAAGTGAAGGGTGAAGTACAGATACCAAATTTGCCTCTATCATCTGGTCCCTGTGGCATCTCTGCTGAAGAAACTCTTCATGGGAAGCCAACAGTTGATGGCGATGC
TATCAAAGAGAAGAATGAAACTGACCCAGCAACAAATGAGGACTCTCAAAAGATTGATACGACAGAAAACGCAAATGGAAACGATGAGGTCCATGATAAGAAGAAGAGTA
AGGATGAAATTTGCACTTGTGGAGTTTGTCAAGGAACTTCTAAAACCTACATGGAAGGTCATATCAGCAAAGATTTTTATAAAACCATAGTCAAGAAAGTGGTGGACAAA
GTCACAGGCTCCTTGCAGGATGGTCATATTCCTCAAACGCAGGAGAAAATCGATCACTATCTTTCGTTTTCGAAATCAAAGCTCACAAAACTTGTTCAGAAACGATTGTT
GCATTTGTTTGAATACAATCCTTTTGTTGCACAATGGTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MEISESNCRRRMKASNIVTNDQIRQITDLSASLAQYFGNAQPLPQLYASLNTHTVSEAPSFPYSDAPMGALGAAMKTGPVIESSKQHDSALCNSLQLKKLEVTKTPQKST
TEVKGEVQIPNLPLSSGPCGISAEETLHGKPTVDGDAIKEKNETDPATNEDSQKIDTTENANGNDEVHDKKKSKDEICTCGVCQGTSKTYMEGHISKDFYKTIVKKVVDK
VTGSLQDGHIPQTQEKIDHYLSFSKSKLTKLVQKRLLHLFEYNPFVAQW

CmoCh02G004400 (gene) of Cucurbita moschata (Rifu) v1 genome