CuGenDBv2

Gene ID	CmoCh02G004410
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	zinc finger CCCH domain-containing protein 38 isoform X2
Genome location	Cmo_Chr02:2308650..2310324
RNA-Seq Expression	CmoCh02G004410
Synteny	CmoCh02G004410
Gene Ontology terms	GO:0003677 - DNA binding (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR000571 - Zinc finger, CCCH-type IPR036855 - Zinc finger, CCCH-type superfamily IPR041367 - E3 ligase, CCCH-type zinc finger

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6604278.1 Zinc finger CCCH domain-containing protein 38, partial [Cucurbita argyrosperma subsp. sororia]

3.4e-228

87.42

Show/hide

Query:  NAEIASDDGSKWSGMATTNTVSKPTQDWGLLSEEEPLPGTRASLKEDRPNKGYNKNMDGTAECDADKSYDTRMSPDLDGRRSHGSNLSDRNDWIGSV---
        +AEIASDDGSKWSGMATTNTVSKPTQDWGLLSEEEPLPGTRASLKEDRPNKGYNKNMDGTAECDADKSYDTRMSPDLDGRRSHGSNLSDRNDWIGSV   
Subjt:  NAEIASDDGSKWSGMATTNTVSKPTQDWGLLSEEEPLPGTRASLKEDRPNKGYNKNMDGTAECDADKSYDTRMSPDLDGRRSHGSNLSDRNDWIGSV---

Query:  ----------------------------RLDT---------------------LDDQNLDDSSENRNRKGGRSFRSTSHDFKDHPRSGRSAAHCTDFVKG
                                    R+ T                      DDQNLDDS ENRNRKGGRSFRSTSHDFKDHPRSGRSAAHCTDFVKG
Subjt:  ----------------------------RLDT---------------------LDDQNLDDSSENRNRKGGRSFRSTSHDFKDHPRSGRSAAHCTDFVKG

Query:  RCHRGASCTFSHDSAFHELSRASPNDISRDRKNDRSKEAYFSRGEREPCSSSLVICKYFAAGSCRNGKNCKYSHHSQPRASPERKSSTDKWEHAQCSDGR
        RCHRGASCTFSHDSAFHELSR SPNDISRDRKNDRSKEAYFSRGEREPCSSSLVICKYFAAGSCRNGKNCKYSHHSQPRASPERKSSTDKWEHAQCSDGR
Subjt:  RCHRGASCTFSHDSAFHELSRASPNDISRDRKNDRSKEAYFSRGEREPCSSSLVICKYFAAGSCRNGKNCKYSHHSQPRASPERKSSTDKWEHAQCSDGR

Query:  EQSWDGLKSSELASGSDFTQLIEDKKEQTASEEPRYTWPSDQKCDHGLNNESKTRWDRAVDTKTVRSNKNDAIPSKAENAGGCTGSSDPRGHRKWPSDDM
        EQSWDGLKSSELASGSDFTQLIEDKKEQTASEEPRYTWPSD+KCDHGLNNESKTRWDRAVDTKTVRSNKNDAIPSKAENAGGCTGSSDPRGHRKWPSDDM
Subjt:  EQSWDGLKSSELASGSDFTQLIEDKKEQTASEEPRYTWPSDQKCDHGLNNESKTRWDRAVDTKTVRSNKNDAIPSKAENAGGCTGSSDPRGHRKWPSDDM

Query:  EMSPDWHYPVQPSNHVVKGDCNVMQDSGSQTSTALAISHAIVQEALAKNQDIAIEPIVVDITRFQKNQT
        EMSPDWHYPVQPSNHVVKGDCNVMQDSGSQTSTALAISHAIVQEALAKNQDIAIEPIVVDITRFQKNQT
Subjt:  EMSPDWHYPVQPSNHVVKGDCNVMQDSGSQTSTALAISHAIVQEALAKNQDIAIEPIVVDITRFQKNQT

KAG7034438.1 Zinc finger CCCH domain-containing protein 38, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.7e-225

86.54

Show/hide

Query:  NAEIASDDGSKWSGMATTNTVSKPTQDWGLLSEEEPLPGTRASLKEDRPNKGYNKNMDGTAECDADKSYDTRMSPDLDGRRSHGSNLSDRNDWIGSV---
        +AEIASDDGSKWSGMATTNTVSKPTQDWGLLSEEEPLPGTRASLKEDRPNKGYNKNMDGTAECDADKSYDTRMSPDLDGRRSHGSNLSDRNDWIGSV   
Subjt:  NAEIASDDGSKWSGMATTNTVSKPTQDWGLLSEEEPLPGTRASLKEDRPNKGYNKNMDGTAECDADKSYDTRMSPDLDGRRSHGSNLSDRNDWIGSV---

Query:  ----------------------------RLDT---------------------LDDQNLDDSSENRNRKGGRSFRSTSHDFKDHPRSGRSAAHCTDFVKG
                                    R+ T                      DDQNLDDS ENRNRKGGRSFRSTSHDFKDHPRSGRSAAHCTDFVKG
Subjt:  ----------------------------RLDT---------------------LDDQNLDDSSENRNRKGGRSFRSTSHDFKDHPRSGRSAAHCTDFVKG

Query:  RCHRGASCTFSHDSAFHELSRASPNDISRDRKNDRSKEAYFSRGEREPCSSSLVICKYFAAGSCRNGKNCKYSHHSQPRASPERKSSTDKWEHAQCSDGR
        RCHRGASCTFSHDSAFHELSR SPNDISRDRKNDRSKEAYFSRGEREPCSSSLVICKYFAAGSCRNGKNCKYSHHSQPRASPERKSSTDKWEHAQCSDGR
Subjt:  RCHRGASCTFSHDSAFHELSRASPNDISRDRKNDRSKEAYFSRGEREPCSSSLVICKYFAAGSCRNGKNCKYSHHSQPRASPERKSSTDKWEHAQCSDGR

Query:  EQSWDGLKSSELASGSDFTQLIEDKKEQTASEEPRYTWPSDQKCDHGLNNESKTRWDRAVDTKTVRSNKNDAIPSKAENAGGCTGSSDPRGHRKWPSDDM
        EQSWDG+KSSELASGSDFTQLIEDKKEQTASEEPRYTWPSDQKCDHGLNNESKTRWDRAVDTKTVRSNKNDAIPSKAENAGGCTGSSDPRGHRKWPSDDM
Subjt:  EQSWDGLKSSELASGSDFTQLIEDKKEQTASEEPRYTWPSDQKCDHGLNNESKTRWDRAVDTKTVRSNKNDAIPSKAENAGGCTGSSDPRGHRKWPSDDM

Query:  EMSPDWHYPVQPSNHVVKGDCNVMQDSGSQTSTALAISHAIVQEALAKNQDIAIEPIVVDITRFQKNQ
        EMSPDWHYPVQPSNHVVKGDCNVMQDSGSQTSTALAISHAIVQEALAKNQDIAIEPIVVDIT F+K +
Subjt:  EMSPDWHYPVQPSNHVVKGDCNVMQDSGSQTSTALAISHAIVQEALAKNQDIAIEPIVVDITRFQKNQ

XP_022949975.1 zinc finger CCCH domain-containing protein 38 isoform X1 [Cucurbita moschata]

1.4e-226

86.99

Show/hide

Query:  NAEIASDDGSKWSGMATTNTVSKPTQDWGLLSEEEPLPGTRASLKEDRPNKGYNKNMDGTAECDADKSYDTRMSPDLDGRRSHGSNLSDRNDWIGSV---
        +AEIASDDGSKWSGMATTNTVSK TQDWGLLSEEEPLPGTRASLKEDRPNKGYNKNMDGTAECDADKSYDTRMSPDLDGRRSHGSNLSDRNDWIGSV   
Subjt:  NAEIASDDGSKWSGMATTNTVSKPTQDWGLLSEEEPLPGTRASLKEDRPNKGYNKNMDGTAECDADKSYDTRMSPDLDGRRSHGSNLSDRNDWIGSV---

Query:  ----------------------------RLDT---------------------LDDQNLDDSSENRNRKGGRSFRSTSHDFKDHPRSGRSAAHCTDFVKG
                                    R+ T                      DDQNLDDS ENRNRKGGRSFRSTSHDFKDHPRSGRSAAHCTDFVKG
Subjt:  ----------------------------RLDT---------------------LDDQNLDDSSENRNRKGGRSFRSTSHDFKDHPRSGRSAAHCTDFVKG

Query:  RCHRGASCTFSHDSAFHELSRASPNDISRDRKNDRSKEAYFSRGEREPCSSSLVICKYFAAGSCRNGKNCKYSHHSQPRASPERKSSTDKWEHAQCSDGR
        RCHRGASCTFSHDSAFHELSR SPNDISRDRKND+SKEAYFSRGEREPCSSSLVICKYFAAGSCRNGKNCKYSHHSQPRASPERKSSTDKWEHAQCSDGR
Subjt:  RCHRGASCTFSHDSAFHELSRASPNDISRDRKNDRSKEAYFSRGEREPCSSSLVICKYFAAGSCRNGKNCKYSHHSQPRASPERKSSTDKWEHAQCSDGR

Query:  EQSWDGLKSSELASGSDFTQLIEDKKEQTASEEPRYTWPSDQKCDHGLNNESKTRWDRAVDTKTVRSNKNDAIPSKAENAGGCTGSSDPRGHRKWPSDDM
        EQSWDGLKSSELASGSDFTQLIEDKKEQTASEEPRYTWPSDQKCDHGLNNESKTRWDRAVD KTVRSNKNDAIPSKAENAGGCTGSSDPRGHRKWPSDDM
Subjt:  EQSWDGLKSSELASGSDFTQLIEDKKEQTASEEPRYTWPSDQKCDHGLNNESKTRWDRAVDTKTVRSNKNDAIPSKAENAGGCTGSSDPRGHRKWPSDDM

Query:  EMSPDWHYPVQPSNHVVKGDCNVMQDSGSQTSTALAISHAIVQEALAKNQDIAIEPIVVDITRFQKNQT
        EMSPDWHYPVQPSNHVVKGDCNVMQDSGSQTSTALAISHAIVQEALAKNQDIAIEPIVVDITRFQKNQT
Subjt:  EMSPDWHYPVQPSNHVVKGDCNVMQDSGSQTSTALAISHAIVQEALAKNQDIAIEPIVVDITRFQKNQT

XP_022949979.1 zinc finger CCCH domain-containing protein 38 isoform X2 [Cucurbita moschata]

5.4e-226

87.12

Show/hide

Query:  NAEIASDDGSKWSGMATTNTVSKPTQDWGLLSEEEPLPGTRASLKEDRPNKGYNKNMDGTAECDADKSYDTRMSPDLDGRRSHGSNLSDRNDWIGS----
        +AEIASDDGSKWSGMATTNTVSK TQDWGLLSEEEPLPGTRASLKEDRPNKGYNKNMDGTAECDADKSYDTRMSPDLDGRRSHGSNLSDRNDWIG     
Subjt:  NAEIASDDGSKWSGMATTNTVSKPTQDWGLLSEEEPLPGTRASLKEDRPNKGYNKNMDGTAECDADKSYDTRMSPDLDGRRSHGSNLSDRNDWIGS----

Query:  ------------------------VRLDT---------------------LDDQNLDDSSENRNRKGGRSFRSTSHDFKDHPRSGRSAAHCTDFVKGRCH
                                 R+ T                      DDQNLDDS ENRNRKGGRSFRSTSHDFKDHPRSGRSAAHCTDFVKGRCH
Subjt:  ------------------------VRLDT---------------------LDDQNLDDSSENRNRKGGRSFRSTSHDFKDHPRSGRSAAHCTDFVKGRCH

Query:  RGASCTFSHDSAFHELSRASPNDISRDRKNDRSKEAYFSRGEREPCSSSLVICKYFAAGSCRNGKNCKYSHHSQPRASPERKSSTDKWEHAQCSDGREQS
        RGASCTFSHDSAFHELSR SPNDISRDRKND+SKEAYFSRGEREPCSSSLVICKYFAAGSCRNGKNCKYSHHSQPRASPERKSSTDKWEHAQCSDGREQS
Subjt:  RGASCTFSHDSAFHELSRASPNDISRDRKNDRSKEAYFSRGEREPCSSSLVICKYFAAGSCRNGKNCKYSHHSQPRASPERKSSTDKWEHAQCSDGREQS

Query:  WDGLKSSELASGSDFTQLIEDKKEQTASEEPRYTWPSDQKCDHGLNNESKTRWDRAVDTKTVRSNKNDAIPSKAENAGGCTGSSDPRGHRKWPSDDMEMS
        WDGLKSSELASGSDFTQLIEDKKEQTASEEPRYTWPSDQKCDHGLNNESKTRWDRAVD KTVRSNKNDAIPSKAENAGGCTGSSDPRGHRKWPSDDMEMS
Subjt:  WDGLKSSELASGSDFTQLIEDKKEQTASEEPRYTWPSDQKCDHGLNNESKTRWDRAVDTKTVRSNKNDAIPSKAENAGGCTGSSDPRGHRKWPSDDMEMS

Query:  PDWHYPVQPSNHVVKGDCNVMQDSGSQTSTALAISHAIVQEALAKNQDIAIEPIVVDITRFQKNQT
        PDWHYPVQPSNHVVKGDCNVMQDSGSQTSTALAISHAIVQEALAKNQDIAIEPIVVDITRFQKNQT
Subjt:  PDWHYPVQPSNHVVKGDCNVMQDSGSQTSTALAISHAIVQEALAKNQDIAIEPIVVDITRFQKNQT

XP_022949980.1 zinc finger CCCH domain-containing protein 38 isoform X3 [Cucurbita moschata]

1.4e-226

86.99

Show/hide

Query:  NAEIASDDGSKWSGMATTNTVSKPTQDWGLLSEEEPLPGTRASLKEDRPNKGYNKNMDGTAECDADKSYDTRMSPDLDGRRSHGSNLSDRNDWIGSV---
        +AEIASDDGSKWSGMATTNTVSK TQDWGLLSEEEPLPGTRASLKEDRPNKGYNKNMDGTAECDADKSYDTRMSPDLDGRRSHGSNLSDRNDWIGSV   
Subjt:  NAEIASDDGSKWSGMATTNTVSKPTQDWGLLSEEEPLPGTRASLKEDRPNKGYNKNMDGTAECDADKSYDTRMSPDLDGRRSHGSNLSDRNDWIGSV---

Query:  ----------------------------RLDT---------------------LDDQNLDDSSENRNRKGGRSFRSTSHDFKDHPRSGRSAAHCTDFVKG
                                    R+ T                      DDQNLDDS ENRNRKGGRSFRSTSHDFKDHPRSGRSAAHCTDFVKG
Subjt:  ----------------------------RLDT---------------------LDDQNLDDSSENRNRKGGRSFRSTSHDFKDHPRSGRSAAHCTDFVKG

Query:  RCHRGASCTFSHDSAFHELSRASPNDISRDRKNDRSKEAYFSRGEREPCSSSLVICKYFAAGSCRNGKNCKYSHHSQPRASPERKSSTDKWEHAQCSDGR
        RCHRGASCTFSHDSAFHELSR SPNDISRDRKND+SKEAYFSRGEREPCSSSLVICKYFAAGSCRNGKNCKYSHHSQPRASPERKSSTDKWEHAQCSDGR
Subjt:  RCHRGASCTFSHDSAFHELSRASPNDISRDRKNDRSKEAYFSRGEREPCSSSLVICKYFAAGSCRNGKNCKYSHHSQPRASPERKSSTDKWEHAQCSDGR

Query:  EQSWDGLKSSELASGSDFTQLIEDKKEQTASEEPRYTWPSDQKCDHGLNNESKTRWDRAVDTKTVRSNKNDAIPSKAENAGGCTGSSDPRGHRKWPSDDM
        EQSWDGLKSSELASGSDFTQLIEDKKEQTASEEPRYTWPSDQKCDHGLNNESKTRWDRAVD KTVRSNKNDAIPSKAENAGGCTGSSDPRGHRKWPSDDM
Subjt:  EQSWDGLKSSELASGSDFTQLIEDKKEQTASEEPRYTWPSDQKCDHGLNNESKTRWDRAVDTKTVRSNKNDAIPSKAENAGGCTGSSDPRGHRKWPSDDM

Query:  EMSPDWHYPVQPSNHVVKGDCNVMQDSGSQTSTALAISHAIVQEALAKNQDIAIEPIVVDITRFQKNQT
        EMSPDWHYPVQPSNHVVKGDCNVMQDSGSQTSTALAISHAIVQEALAKNQDIAIEPIVVDITRFQKNQT
Subjt:  EMSPDWHYPVQPSNHVVKGDCNVMQDSGSQTSTALAISHAIVQEALAKNQDIAIEPIVVDITRFQKNQT

TrEMBL top hits

e value

%identity

Alignment

A0A6J1GEA4 zinc finger CCCH domain-containing protein 38 isoform X1

6.8e-227

86.99

Show/hide

Query:  NAEIASDDGSKWSGMATTNTVSKPTQDWGLLSEEEPLPGTRASLKEDRPNKGYNKNMDGTAECDADKSYDTRMSPDLDGRRSHGSNLSDRNDWIGSV---
        +AEIASDDGSKWSGMATTNTVSK TQDWGLLSEEEPLPGTRASLKEDRPNKGYNKNMDGTAECDADKSYDTRMSPDLDGRRSHGSNLSDRNDWIGSV   
Subjt:  NAEIASDDGSKWSGMATTNTVSKPTQDWGLLSEEEPLPGTRASLKEDRPNKGYNKNMDGTAECDADKSYDTRMSPDLDGRRSHGSNLSDRNDWIGSV---

Query:  ----------------------------RLDT---------------------LDDQNLDDSSENRNRKGGRSFRSTSHDFKDHPRSGRSAAHCTDFVKG
                                    R+ T                      DDQNLDDS ENRNRKGGRSFRSTSHDFKDHPRSGRSAAHCTDFVKG
Subjt:  ----------------------------RLDT---------------------LDDQNLDDSSENRNRKGGRSFRSTSHDFKDHPRSGRSAAHCTDFVKG

Query:  RCHRGASCTFSHDSAFHELSRASPNDISRDRKNDRSKEAYFSRGEREPCSSSLVICKYFAAGSCRNGKNCKYSHHSQPRASPERKSSTDKWEHAQCSDGR
        RCHRGASCTFSHDSAFHELSR SPNDISRDRKND+SKEAYFSRGEREPCSSSLVICKYFAAGSCRNGKNCKYSHHSQPRASPERKSSTDKWEHAQCSDGR
Subjt:  RCHRGASCTFSHDSAFHELSRASPNDISRDRKNDRSKEAYFSRGEREPCSSSLVICKYFAAGSCRNGKNCKYSHHSQPRASPERKSSTDKWEHAQCSDGR

Query:  EQSWDGLKSSELASGSDFTQLIEDKKEQTASEEPRYTWPSDQKCDHGLNNESKTRWDRAVDTKTVRSNKNDAIPSKAENAGGCTGSSDPRGHRKWPSDDM
        EQSWDGLKSSELASGSDFTQLIEDKKEQTASEEPRYTWPSDQKCDHGLNNESKTRWDRAVD KTVRSNKNDAIPSKAENAGGCTGSSDPRGHRKWPSDDM
Subjt:  EQSWDGLKSSELASGSDFTQLIEDKKEQTASEEPRYTWPSDQKCDHGLNNESKTRWDRAVDTKTVRSNKNDAIPSKAENAGGCTGSSDPRGHRKWPSDDM

Query:  EMSPDWHYPVQPSNHVVKGDCNVMQDSGSQTSTALAISHAIVQEALAKNQDIAIEPIVVDITRFQKNQT
        EMSPDWHYPVQPSNHVVKGDCNVMQDSGSQTSTALAISHAIVQEALAKNQDIAIEPIVVDITRFQKNQT
Subjt:  EMSPDWHYPVQPSNHVVKGDCNVMQDSGSQTSTALAISHAIVQEALAKNQDIAIEPIVVDITRFQKNQT

A0A6J1GEA9 zinc finger CCCH domain-containing protein 38 isoform X3

6.8e-227

86.99

Show/hide

Query:  NAEIASDDGSKWSGMATTNTVSKPTQDWGLLSEEEPLPGTRASLKEDRPNKGYNKNMDGTAECDADKSYDTRMSPDLDGRRSHGSNLSDRNDWIGSV---
        +AEIASDDGSKWSGMATTNTVSK TQDWGLLSEEEPLPGTRASLKEDRPNKGYNKNMDGTAECDADKSYDTRMSPDLDGRRSHGSNLSDRNDWIGSV   
Subjt:  NAEIASDDGSKWSGMATTNTVSKPTQDWGLLSEEEPLPGTRASLKEDRPNKGYNKNMDGTAECDADKSYDTRMSPDLDGRRSHGSNLSDRNDWIGSV---

Query:  ----------------------------RLDT---------------------LDDQNLDDSSENRNRKGGRSFRSTSHDFKDHPRSGRSAAHCTDFVKG
                                    R+ T                      DDQNLDDS ENRNRKGGRSFRSTSHDFKDHPRSGRSAAHCTDFVKG
Subjt:  ----------------------------RLDT---------------------LDDQNLDDSSENRNRKGGRSFRSTSHDFKDHPRSGRSAAHCTDFVKG

Query:  RCHRGASCTFSHDSAFHELSRASPNDISRDRKNDRSKEAYFSRGEREPCSSSLVICKYFAAGSCRNGKNCKYSHHSQPRASPERKSSTDKWEHAQCSDGR
        RCHRGASCTFSHDSAFHELSR SPNDISRDRKND+SKEAYFSRGEREPCSSSLVICKYFAAGSCRNGKNCKYSHHSQPRASPERKSSTDKWEHAQCSDGR
Subjt:  RCHRGASCTFSHDSAFHELSRASPNDISRDRKNDRSKEAYFSRGEREPCSSSLVICKYFAAGSCRNGKNCKYSHHSQPRASPERKSSTDKWEHAQCSDGR

Query:  EQSWDGLKSSELASGSDFTQLIEDKKEQTASEEPRYTWPSDQKCDHGLNNESKTRWDRAVDTKTVRSNKNDAIPSKAENAGGCTGSSDPRGHRKWPSDDM
        EQSWDGLKSSELASGSDFTQLIEDKKEQTASEEPRYTWPSDQKCDHGLNNESKTRWDRAVD KTVRSNKNDAIPSKAENAGGCTGSSDPRGHRKWPSDDM
Subjt:  EQSWDGLKSSELASGSDFTQLIEDKKEQTASEEPRYTWPSDQKCDHGLNNESKTRWDRAVDTKTVRSNKNDAIPSKAENAGGCTGSSDPRGHRKWPSDDM

Query:  EMSPDWHYPVQPSNHVVKGDCNVMQDSGSQTSTALAISHAIVQEALAKNQDIAIEPIVVDITRFQKNQT
        EMSPDWHYPVQPSNHVVKGDCNVMQDSGSQTSTALAISHAIVQEALAKNQDIAIEPIVVDITRFQKNQT
Subjt:  EMSPDWHYPVQPSNHVVKGDCNVMQDSGSQTSTALAISHAIVQEALAKNQDIAIEPIVVDITRFQKNQT

A0A6J1GEH4 zinc finger CCCH domain-containing protein 38 isoform X2

2.6e-226

87.12

Show/hide

Query:  NAEIASDDGSKWSGMATTNTVSKPTQDWGLLSEEEPLPGTRASLKEDRPNKGYNKNMDGTAECDADKSYDTRMSPDLDGRRSHGSNLSDRNDWIGS----
        +AEIASDDGSKWSGMATTNTVSK TQDWGLLSEEEPLPGTRASLKEDRPNKGYNKNMDGTAECDADKSYDTRMSPDLDGRRSHGSNLSDRNDWIG     
Subjt:  NAEIASDDGSKWSGMATTNTVSKPTQDWGLLSEEEPLPGTRASLKEDRPNKGYNKNMDGTAECDADKSYDTRMSPDLDGRRSHGSNLSDRNDWIGS----

Query:  ------------------------VRLDT---------------------LDDQNLDDSSENRNRKGGRSFRSTSHDFKDHPRSGRSAAHCTDFVKGRCH
                                 R+ T                      DDQNLDDS ENRNRKGGRSFRSTSHDFKDHPRSGRSAAHCTDFVKGRCH
Subjt:  ------------------------VRLDT---------------------LDDQNLDDSSENRNRKGGRSFRSTSHDFKDHPRSGRSAAHCTDFVKGRCH

Query:  RGASCTFSHDSAFHELSRASPNDISRDRKNDRSKEAYFSRGEREPCSSSLVICKYFAAGSCRNGKNCKYSHHSQPRASPERKSSTDKWEHAQCSDGREQS
        RGASCTFSHDSAFHELSR SPNDISRDRKND+SKEAYFSRGEREPCSSSLVICKYFAAGSCRNGKNCKYSHHSQPRASPERKSSTDKWEHAQCSDGREQS
Subjt:  RGASCTFSHDSAFHELSRASPNDISRDRKNDRSKEAYFSRGEREPCSSSLVICKYFAAGSCRNGKNCKYSHHSQPRASPERKSSTDKWEHAQCSDGREQS

Query:  WDGLKSSELASGSDFTQLIEDKKEQTASEEPRYTWPSDQKCDHGLNNESKTRWDRAVDTKTVRSNKNDAIPSKAENAGGCTGSSDPRGHRKWPSDDMEMS
        WDGLKSSELASGSDFTQLIEDKKEQTASEEPRYTWPSDQKCDHGLNNESKTRWDRAVD KTVRSNKNDAIPSKAENAGGCTGSSDPRGHRKWPSDDMEMS
Subjt:  WDGLKSSELASGSDFTQLIEDKKEQTASEEPRYTWPSDQKCDHGLNNESKTRWDRAVDTKTVRSNKNDAIPSKAENAGGCTGSSDPRGHRKWPSDDMEMS

Query:  PDWHYPVQPSNHVVKGDCNVMQDSGSQTSTALAISHAIVQEALAKNQDIAIEPIVVDITRFQKNQT
        PDWHYPVQPSNHVVKGDCNVMQDSGSQTSTALAISHAIVQEALAKNQDIAIEPIVVDITRFQKNQT
Subjt:  PDWHYPVQPSNHVVKGDCNVMQDSGSQTSTALAISHAIVQEALAKNQDIAIEPIVVDITRFQKNQT

A0A6J1IPZ3 zinc finger CCCH domain-containing protein 38 isoform X1

1.4e-216

83.37

Show/hide

Query:  NAEIASDDGSKWSGMATTNTVSKPTQDWGLLSEEEPLPGTRASLKEDRPNKGYNKNMDGTAECDADKSYDTRMSPDLDGRRSHGSNLSDRNDWIGSV---
        +AEIASDDGSKWSGMATTNTVSKPTQDWGLLSEEEPLPGTRASLKEDRPNKGYNKNMDGTAECDA++SYD RMSPDLDGRRSHGSNL DRNDWIGSV   
Subjt:  NAEIASDDGSKWSGMATTNTVSKPTQDWGLLSEEEPLPGTRASLKEDRPNKGYNKNMDGTAECDADKSYDTRMSPDLDGRRSHGSNLSDRNDWIGSV---

Query:  ----------------------------RLDT---------------------LDDQNLDDSSENRNRKGGRSFRSTSHDFKDHPRSGRSAAHCTDFVKG
                                    R+ T                      DDQNLDDS ENRNRKG RSFRSTSHDFKD+PRSGRSAA+CTDFVKG
Subjt:  ----------------------------RLDT---------------------LDDQNLDDSSENRNRKGGRSFRSTSHDFKDHPRSGRSAAHCTDFVKG

Query:  RCHRGASCTFSHDSAFHELSRASPNDISRDRKNDRSKEAYFSRGEREPCSSSLVICKYFAAGSCRNGKNCKYSHHSQPRASPERKSSTDKWEHAQCSDGR
        RCHRGASCTFSHDSAFHELSR SPNDISRDRKN+R+KEAYFSRGEREPCSSSLVICKYFAAGSCRNGKNCKYSHHSQ RASPERKSSTDK EH QCSDGR
Subjt:  RCHRGASCTFSHDSAFHELSRASPNDISRDRKNDRSKEAYFSRGEREPCSSSLVICKYFAAGSCRNGKNCKYSHHSQPRASPERKSSTDKWEHAQCSDGR

Query:  EQSWDGLKSSELASGSDFTQLIEDKKEQTASEEPRYTWPSDQKCDHGLNNESKTRWDRAVDTKTVRSNKNDAIPSKAENAGGCTGSSDPRGHRKWPSDDM
        EQ WDGLKSSELASGSDFTQLIEDKKEQTA+EEPRYTWPSDQKCDHGLNNESKTRWDRAVD KTVRSNKNDAIPSKAENAGGCTGSSDPRGHRKWPSDDM
Subjt:  EQSWDGLKSSELASGSDFTQLIEDKKEQTASEEPRYTWPSDQKCDHGLNNESKTRWDRAVDTKTVRSNKNDAIPSKAENAGGCTGSSDPRGHRKWPSDDM

Query:  EMSPDWHYPVQPSNHVVKGDCNVMQDSGSQTSTALAISHAIVQEALAKNQDIAIEPIVVDITRFQKNQT
        EMSPDWHYPVQPSNHVVKGDCNVMQDSGSQTSTALAISHA VQE LAKNQDIAIEPIVVDITRF+K+ T
Subjt:  EMSPDWHYPVQPSNHVVKGDCNVMQDSGSQTSTALAISHAIVQEALAKNQDIAIEPIVVDITRFQKNQT

A0A6J1ISF1 zinc finger CCCH domain-containing protein 38 isoform X3

1.4e-216

83.37

Show/hide

Query:  NAEIASDDGSKWSGMATTNTVSKPTQDWGLLSEEEPLPGTRASLKEDRPNKGYNKNMDGTAECDADKSYDTRMSPDLDGRRSHGSNLSDRNDWIGSV---
        +AEIASDDGSKWSGMATTNTVSKPTQDWGLLSEEEPLPGTRASLKEDRPNKGYNKNMDGTAECDA++SYD RMSPDLDGRRSHGSNL DRNDWIGSV   
Subjt:  NAEIASDDGSKWSGMATTNTVSKPTQDWGLLSEEEPLPGTRASLKEDRPNKGYNKNMDGTAECDADKSYDTRMSPDLDGRRSHGSNLSDRNDWIGSV---

Query:  ----------------------------RLDT---------------------LDDQNLDDSSENRNRKGGRSFRSTSHDFKDHPRSGRSAAHCTDFVKG
                                    R+ T                      DDQNLDDS ENRNRKG RSFRSTSHDFKD+PRSGRSAA+CTDFVKG
Subjt:  ----------------------------RLDT---------------------LDDQNLDDSSENRNRKGGRSFRSTSHDFKDHPRSGRSAAHCTDFVKG

Query:  RCHRGASCTFSHDSAFHELSRASPNDISRDRKNDRSKEAYFSRGEREPCSSSLVICKYFAAGSCRNGKNCKYSHHSQPRASPERKSSTDKWEHAQCSDGR
        RCHRGASCTFSHDSAFHELSR SPNDISRDRKN+R+KEAYFSRGEREPCSSSLVICKYFAAGSCRNGKNCKYSHHSQ RASPERKSSTDK EH QCSDGR
Subjt:  RCHRGASCTFSHDSAFHELSRASPNDISRDRKNDRSKEAYFSRGEREPCSSSLVICKYFAAGSCRNGKNCKYSHHSQPRASPERKSSTDKWEHAQCSDGR

Query:  EQSWDGLKSSELASGSDFTQLIEDKKEQTASEEPRYTWPSDQKCDHGLNNESKTRWDRAVDTKTVRSNKNDAIPSKAENAGGCTGSSDPRGHRKWPSDDM
        EQ WDGLKSSELASGSDFTQLIEDKKEQTA+EEPRYTWPSDQKCDHGLNNESKTRWDRAVD KTVRSNKNDAIPSKAENAGGCTGSSDPRGHRKWPSDDM
Subjt:  EQSWDGLKSSELASGSDFTQLIEDKKEQTASEEPRYTWPSDQKCDHGLNNESKTRWDRAVDTKTVRSNKNDAIPSKAENAGGCTGSSDPRGHRKWPSDDM

Query:  EMSPDWHYPVQPSNHVVKGDCNVMQDSGSQTSTALAISHAIVQEALAKNQDIAIEPIVVDITRFQKNQT
        EMSPDWHYPVQPSNHVVKGDCNVMQDSGSQTSTALAISHA VQE LAKNQDIAIEPIVVDITRF+K+ T
Subjt:  EMSPDWHYPVQPSNHVVKGDCNVMQDSGSQTSTALAISHAIVQEALAKNQDIAIEPIVVDITRFQKNQT

SwissProt top hits

e value

%identity

Alignment

Q6YYC0 Zinc finger CCCH domain-containing protein 55

3.3e-08

34.56

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Query:  DRNDWIGSVRLDTLDDQNLDDSSENRNRKGGRSFRSTSHDFKDHPRSGRSAAHCTDFVKGRCHRGASCTFSHDSAFHELSRASPNDISRDRKNDRS--KE
        D  +  G    D +D +  DD   NR  +GG  +   + +  +  R  RS   C DFVKGRC RGA+C + HD +          D  RD    RS    
Subjt:  DRNDWIGSVRLDTLDDQNLDDSSENRNRKGGRSFRSTSHDFKDHPRSGRSAAHCTDFVKGRCHRGASCTFSHDSAFHELSRASPNDISRDRKNDRS--KE

Query:  AYFSRGEREPCSSSLVICKYFAAGSCRNGKNCKYSH
        +Y +R E    + +   CK+FA G CR G+NC Y H
Subjt:  AYFSRGEREPCSSSLVICKYFAAGSCRNGKNCKYSH

Arabidopsis top hits

e value

%identity

Alignment

AT3G47120.1 RNA recognition motif (RRM)-containing protein

2.9e-04

27.33

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Query:  SFRSTSHDFKDHPRSGRSA-AHCTDFVKGRCHRGASCTFSHDSAFHELSRASPNDISRDRKNDRSKEAYFSRGEREPCSSSLVICKYFAAGSCRNGKNCK
        +++    + ++  R  R A   C  F +G C RG SC FSHD       RA+  +     + DRS     S+ + +       +C+ F  G C  G +CK
Subjt:  SFRSTSHDFKDHPRSGRSA-AHCTDFVKGRCHRGASCTFSHDSAFHELSRASPNDISRDRKNDRSKEAYFSRGEREPCSSSLVICKYFAAGSCRNGKNCK

Query:  YSHHSQPRASPERKSSTDKWEHAQCSDGREQSWD-----GLKSSELASGS--DFTQLIEDK
        +SH        E++++T  W H    + R   WD     G K    + G+  DF   +E+K
Subjt:  YSHHSQPRASPERKSSTDKWEHAQCSDGREQSWD-----GLKSSELASGS--DFTQLIEDK

Sequences

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CDS sequence

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ATGATGGTTCCAAGTGGTCTGGTATGGCGACTACCAATACCGTTTCGAAATGCTGAAATAGCGAGTGATGATGGTTCCAAGTGGTCTGGTATGGCGACTACCAATACCGT
TTCGAAACCTACGCAAGATTGGGGATTGCTGTCAGAGGAGGAACCTTTACCTGGAACCAGAGCTTCGCTTAAGGAGGACCGCCCTAATAAAGGCTACAATAAAAATATGG
ACGGCACTGCTGAATGTGATGCTGACAAAAGCTACGACACGAGAATGTCCCCTGATCTAGATGGACGGAGAAGTCATGGCTCTAACCTGTCTGATAGAAATGATTGGATC
GGGTCAGTGAGGTTAGATACACTGGACGATCAAAATCTGGACGATAGCTCGGAAAATAGGAACAGGAAGGGGGGCCGATCCTTTAGATCAACTTCCCATGATTTTAAGGA
CCATCCCAGGAGTGGAAGATCAGCTGCTCATTGTACTGACTTCGTGAAGGGAAGGTGTCATAGGGGAGCCTCTTGCACGTTTTCTCATGACAGTGCATTTCATGAATTAT
CACGAGCTTCTCCAAATGATATTAGTAGAGACAGGAAAAATGATCGGAGTAAAGAAGCGTACTTCTCACGTGGTGAGCGTGAACCTTGCAGTAGCAGTCTTGTTATCTGT
AAATATTTTGCTGCTGGATCTTGTCGTAATGGAAAAAATTGCAAGTATTCTCATCATAGCCAGCCACGTGCAAGTCCAGAGAGGAAGTCGAGTACTGATAAATGGGAACA
CGCCCAATGTTCAGATGGTAGGGAACAGTCGTGGGATGGCTTAAAATCGAGTGAATTGGCTAGTGGTTCGGATTTCACTCAGTTGATTGAGGACAAAAAAGAACAAACTG
CTAGTGAAGAGCCAAGATATACATGGCCTTCAGATCAAAAATGTGATCATGGTTTGAATAATGAGAGCAAAACTCGGTGGGATCGAGCTGTTGATACCAAGACAGTGCGA
AGCAACAAGAACGATGCCATTCCGAGCAAGGCAGAGAATGCTGGTGGTTGCACAGGCAGTTCTGACCCTAGAGGTCACAGAAAGTGGCCAAGTGATGATATGGAGATGTC
TCCTGATTGGCACTACCCTGTGCAACCATCCAATCATGTAGTGAAAGGCGATTGCAACGTTATGCAAGATTCTGGCTCTCAAACTTCCACGGCTTTAGCCATTAGCCATG
CGATAGTTCAAGAGGCTCTGGCTAAGAATCAAGACATTGCCATAGAGCCCATAGTAGTTGATATTACTCGTTTTCAGAAAAACCAAACTTGA

mRNA sequence

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Protein sequence

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MMVPSGLVWRLPIPFRNAEIASDDGSKWSGMATTNTVSKPTQDWGLLSEEEPLPGTRASLKEDRPNKGYNKNMDGTAECDADKSYDTRMSPDLDGRRSHGSNLSDRNDWI
GSVRLDTLDDQNLDDSSENRNRKGGRSFRSTSHDFKDHPRSGRSAAHCTDFVKGRCHRGASCTFSHDSAFHELSRASPNDISRDRKNDRSKEAYFSRGEREPCSSSLVIC
KYFAAGSCRNGKNCKYSHHSQPRASPERKSSTDKWEHAQCSDGREQSWDGLKSSELASGSDFTQLIEDKKEQTASEEPRYTWPSDQKCDHGLNNESKTRWDRAVDTKTVR
SNKNDAIPSKAENAGGCTGSSDPRGHRKWPSDDMEMSPDWHYPVQPSNHVVKGDCNVMQDSGSQTSTALAISHAIVQEALAKNQDIAIEPIVVDITRFQKNQT

CmoCh02G004410 (gene) of Cucurbita moschata (Rifu) v1 genome