; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh02G004700 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh02G004700
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionbinding partner of ACD11 1-like
Genome locationCmo_Chr02:2536056..2537911
RNA-Seq ExpressionCmoCh02G004700
SyntenyCmoCh02G004700
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7035145.1 Binding partner of ACD11 1 [Cucurbita argyrosperma subsp. argyrosperma]6.2e-11894.59Show/hide
Query:  MASQVRTVRVTNVSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLS-----------GATIVDQPVSIASAPDYSLPAVPAS
        MASQVRTVRVTN+SLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLS           GATIVDQPVSIASAPDYSLPAVPA+
Subjt:  MASQVRTVRVTNVSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLS-----------GATIVDQPVSIASAPDYSLPAVPAS

Query:  APLPVSSPSAENAGSGTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEK
        APLPVSSPSAENA SGTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEK
Subjt:  APLPVSSPSAENAGSGTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEK

Query:  TKAAVNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS
        TKAAVNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS
Subjt:  TKAAVNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS

XP_022947210.1 binding partner of ACD11 1-like [Cucurbita moschata]5.4e-122100Show/hide
Query:  MASQVRTVRVTNVSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYSLPAVPASAPLPVSSPSAE
        MASQVRTVRVTNVSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYSLPAVPASAPLPVSSPSAE
Subjt:  MASQVRTVRVTNVSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYSLPAVPASAPLPVSSPSAE

Query:  NAGSGTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAAVNNAGTA
        NAGSGTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAAVNNAGTA
Subjt:  NAGSGTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAAVNNAGTA

Query:  LMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS
        LMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS
Subjt:  LMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS

XP_023007523.1 binding partner of ACD11 1-like [Cucurbita maxima]9.5e-11997.58Show/hide
Query:  MASQVRTVRVTNVSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYSLPAVPASAPLPVSSPSAE
        MASQVRTVRVTNVSLSASEKDLRDFFSFSGEIE VEMRKDNERSQIAFVTFKD KGAETSILLSGATIVDQPVSIA+APDY+LPAVPASAPLPVSSPSAE
Subjt:  MASQVRTVRVTNVSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYSLPAVPASAPLPVSSPSAE

Query:  NAGSGTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAAVNNAGTA
        NAGSGTAGSAM KAEDVVSSMLAKGFTLGKD LNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAAVNNAGTA
Subjt:  NAGSGTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAAVNNAGTA

Query:  LMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS
        LMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS
Subjt:  LMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS

XP_023533747.1 binding partner of ACD11 1-like [Cucurbita pepo subsp. pepo]7.8e-12199.19Show/hide
Query:  MASQVRTVRVTNVSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYSLPAVPASAPLPVSSPSAE
        MASQVRTVRVTNVSLSASEKDLRDFFSFSGEIE VEMRKDNERSQIAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYSLPAVPASAPLPVSSPSAE
Subjt:  MASQVRTVRVTNVSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYSLPAVPASAPLPVSSPSAE

Query:  NAGSGTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAAVNNAGTA
        NAGSGTAGSAM KAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAAVNNAGTA
Subjt:  NAGSGTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAAVNNAGTA

Query:  LMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS
        LMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS
Subjt:  LMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS

XP_038900618.1 binding partner of ACD11 1-like isoform X2 [Benincasa hispida]2.0e-10084.68Show/hide
Query:  VRTVRVTNVSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYSLPAVPASAP--LPVSSPSAENA
        +RTVRVTNVSLS +EKDLRDFFSFSGEIE VEMRKD ERSQ+AFVTFKDPKGAETSILLSGATIVDQPVSIASAPDY+LPAV ASAP  +PVS+P+ +N 
Subjt:  VRTVRVTNVSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYSLPAVPASAP--LPVSSPSAENA

Query:  GSG--TAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAAVNNAGTA
         SG  TAGSAM KAEDVVSSMLAKGFTLGKDALN+AKSFD++HQLTSTASSKV SLDQKIGLSEKISVGTTVVNEKV+EMDEKFQVSEKTKAAV+NAG+A
Subjt:  GSG--TAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAAVNNAGTA

Query:  LMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS
        +M NRYV TGASWV+QTFQRVAKAAV+VS KTKEKVL EDQ K  G S
Subjt:  LMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS

TrEMBL top hitse value%identityAlignment
A0A0A0LRG1 RRM domain-containing protein7.7e-9883.94Show/hide
Query:  RTVRVTNVSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYSLPAVPASAP--LPVSSPSAENAG
        RTVRVTNVSLSA+EKDLRDFFSFSGEIE VEMR DNERSQ+AFVTFKD KGAETSILLSGATIVDQPVSI+SAPDY+LPAV ASAP  +PVS+P+ +N  
Subjt:  RTVRVTNVSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYSLPAVPASAP--LPVSSPSAENAG

Query:  S---GTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAAVNNAGTA
        S    TAGSAM KAEDVVSSMLAKGFTLGKDALN+AKSFD++HQLTSTASSKV SLDQKIGLSEKISVGTTVVNEKV+EMDEKFQVSEKTKAAV+NAG+A
Subjt:  S---GTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAAVNNAGTA

Query:  LMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLA-EDQAKQEGRS
        +M NRYV TGASWV+QTFQRVAKAAV+VS KTKEKVLA EDQ K  G S
Subjt:  LMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLA-EDQAKQEGRS

A0A5A7TN24 Binding partner of ACD11 1-like isoform X12.0e-9884.68Show/hide
Query:  RTVRVTNVSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYSLPAVPASAP--LPVSSPSAENAG
        RTVRVTNVSLSA+EKDLRDFFSFSGEIE VEMR DNERSQ+AFVTFKDPKGAETSILLSGATIVDQPVSI+SAPDY+LPAV ASAP  +PVS+P+ +N  
Subjt:  RTVRVTNVSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYSLPAVPASAP--LPVSSPSAENAG

Query:  S--GTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAAVNNAGTAL
        S   TAGSA+ K EDVVSSMLAKGFTLGKDALN+AKSFD++HQLTSTASSKV SLDQKIGLSEKISVGTTVVNEKV+EMDEKFQVSEKTKAAV+NAG+AL
Subjt:  S--GTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAAVNNAGTAL

Query:  MANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLA-EDQAKQEGRS
        MANRYV TGASWV+QTFQRVAKAAV+VS KTKEKVLA EDQ K  G S
Subjt:  MANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLA-EDQAKQEGRS

A0A6J1G681 binding partner of ACD11 1-like2.6e-122100Show/hide
Query:  MASQVRTVRVTNVSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYSLPAVPASAPLPVSSPSAE
        MASQVRTVRVTNVSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYSLPAVPASAPLPVSSPSAE
Subjt:  MASQVRTVRVTNVSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYSLPAVPASAPLPVSSPSAE

Query:  NAGSGTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAAVNNAGTA
        NAGSGTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAAVNNAGTA
Subjt:  NAGSGTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAAVNNAGTA

Query:  LMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS
        LMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS
Subjt:  LMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS

A0A6J1JGG3 binding partner of ACD11 1-like isoform X26.5e-9780.48Show/hide
Query:  VRTVRVTNVSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYSLPAVPASAPLPVSSPSAENAG-
        +RTVRVTNVSL A+EK+LR+FFSFSGEIE VEMRKDNE+ Q+AFVTFKDPKGAETSILLSGATIVDQP+SI SAPDY+LPAV AS P   S+P+AEN G 
Subjt:  VRTVRVTNVSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYSLPAVPASAPLPVSSPSAENAG-

Query:  --------SGTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAAVN
                +GT GSAM KAEDVVSSMLAKGF LGKDALNRAKSFD++HQLT TASSKV SLDQKIGLSEKISVGTTVVNEKV+EMDEKFQVSEKTKAAVN
Subjt:  --------SGTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAAVN

Query:  NAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEG
        NAG+A+M NRYVSTGASWV+QTFQRVAKAAV+VS KTKEK+LAEDQ  + G
Subjt:  NAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEG

A0A6J1L7W4 binding partner of ACD11 1-like4.6e-11997.58Show/hide
Query:  MASQVRTVRVTNVSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYSLPAVPASAPLPVSSPSAE
        MASQVRTVRVTNVSLSASEKDLRDFFSFSGEIE VEMRKDNERSQIAFVTFKD KGAETSILLSGATIVDQPVSIA+APDY+LPAVPASAPLPVSSPSAE
Subjt:  MASQVRTVRVTNVSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYSLPAVPASAPLPVSSPSAE

Query:  NAGSGTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAAVNNAGTA
        NAGSGTAGSAM KAEDVVSSMLAKGFTLGKD LNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAAVNNAGTA
Subjt:  NAGSGTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAAVNNAGTA

Query:  LMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS
        LMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS
Subjt:  LMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQEGRS

SwissProt top hitse value%identityAlignment
P87216 Protein vip11.0e-0628.26Show/hide
Query:  VRVTNVSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYSLPAVPASAPLPVSSPSAENAGSGTA
        V VTN+S   +EK + DFFSF G++  +   K  E +Q A + F+ P   +T++LL  A +    + I S    +            S+     AG   A
Subjt:  VRVTNVSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYSLPAVPASAPLPVSSPSAENAGSGTA

Query:  GSAMNKAED-VVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTV-VNEKVKEMDEKFQVSEK
            +K    ++S +L++G+ L    L ++   DQ + ++S     + S      LS   SV     V EK  E+D KF +S+K
Subjt:  GSAMNKAED-VVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTV-VNEKVKEMDEKFQVSEK

Q9LFD5 Binding partner of ACD11 11.0e-5955.6Show/hide
Query:  MASQVRTVRVTNVSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYSLPAVPASAPLPVSSPSAE
        MASQVR+V+V N+S  A+E D+++FFSFSGE+E +++ + NE S  A+VTFK+ +GAET++LLSGA+I DQ V I  AP+YS PA          +P AE
Subjt:  MASQVRTVRVTNVSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYSLPAVPASAPLPVSSPSAE

Query:  NAGSGTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKA-------A
           SG A S + KAEDVVSSMLAKGF LGKDA+ +AK+FD+KH  TSTA++ V SLDQKIGLS+K++ GT++VNEK+K +D+ FQV+E+TK+        
Subjt:  NAGSGTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKA-------A

Query:  VNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAK
        V++AG+A+M NRYV TG SW    F RVA+AA EV  KTKEKV AE  ++
Subjt:  VNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAK

Arabidopsis top hitse value%identityAlignment
AT4G17720.1 RNA-binding (RRM/RBD/RNP motifs) family protein6.5e-6557.09Show/hide
Query:  TVRVTNVSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYSLPAVPASAPLPVSSPSAENAGSGT
        TV+V+NVSL A+++DL++FFSFSG+I  +E + + ER+++A+VTFKD +GAET++LLSGATIVD  V ++ APDY L     ++  P  S  +  AG   
Subjt:  TVRVTNVSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYSLPAVPASAPLPVSSPSAENAGSGT

Query:  AGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAA-------VNNAGT
          S + KAEDVVSSMLAKGF LGKDA+ +AKS D+KHQLTSTAS+KV S D+KIG ++KI+ GT VV EKV+E+D+K+QVSEKTK+A       V+NAG+
Subjt:  AGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAA-------VNNAGT

Query:  ALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKV-LAEDQAKQE
        A+M NRYV TGA+WVT  F +VAKAA EV  K KEKV +AE++ K++
Subjt:  ALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKV-LAEDQAKQE

AT5G16840.1 binding partner of acd11 17.4e-6155.6Show/hide
Query:  MASQVRTVRVTNVSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYSLPAVPASAPLPVSSPSAE
        MASQVR+V+V N+S  A+E D+++FFSFSGE+E +++ + NE S  A+VTFK+ +GAET++LLSGA+I DQ V I  AP+YS PA          +P AE
Subjt:  MASQVRTVRVTNVSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYSLPAVPASAPLPVSSPSAE

Query:  NAGSGTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKA-------A
           SG A S + KAEDVVSSMLAKGF LGKDA+ +AK+FD+KH  TSTA++ V SLDQKIGLS+K++ GT++VNEK+K +D+ FQV+E+TK+        
Subjt:  NAGSGTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKA-------A

Query:  VNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAK
        V++AG+A+M NRYV TG SW    F RVA+AA EV  KTKEKV AE  ++
Subjt:  VNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAK

AT5G16840.2 binding partner of acd11 13.0e-6255.6Show/hide
Query:  MASQVRTVRVTNVSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYSLPAVPASAPLPVSSPSAE
        MASQVR+V+V N+S  A+E D+++FFSFSGE+E ++++  NE S  A+VTFK+ +GAET++LLSGA+I DQ V I  AP+YS PA          +P AE
Subjt:  MASQVRTVRVTNVSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYSLPAVPASAPLPVSSPSAE

Query:  NAGSGTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKA-------A
           SG A S + KAEDVVSSMLAKGF LGKDA+ +AK+FD+KH  TSTA++ V SLDQKIGLS+K++ GT++VNEK+K +D+ FQV+E+TK+        
Subjt:  NAGSGTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKA-------A

Query:  VNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAK
        V++AG+A+M NRYV TG SW    F RVA+AA EV  KTKEKV AE  ++
Subjt:  VNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAK

AT5G16840.3 binding partner of acd11 16.9e-5954.88Show/hide
Query:  VRTVRVTNVSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYSLPAVPASAPLPVSSPSAENAGS
        VR+V+V N+S  A+E D+++FFSFSGE+E +++ + NE S  A+VTFK+ +GAET++LLSGA+I DQ V I  AP+YS PA          +P AE   S
Subjt:  VRTVRVTNVSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYSLPAVPASAPLPVSSPSAENAGS

Query:  GTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKA-------AVNNA
        G A S + KAEDVVSSMLAKGF LGKDA+ +AK+FD+KH  TSTA++ V SLDQKIGLS+K++ GT++VNEK+K +D+ FQV+E+TK+        V++A
Subjt:  GTAGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKA-------AVNNA

Query:  GTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAK
        G+A+M NRYV TG SW    F RVA+AA EV  KTKEKV AE  ++
Subjt:  GTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAK

AT5G46870.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.2e-6354.25Show/hide
Query:  TVRVTNVSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYSLPAVPASAPLPVSSPSAENAGSGT
        TV+V+NVSL A+E+DL++FFSFSG+I  +E + +N+ S++A+VTFKD +GAET++LL+G+TIVD  V++  +PDY LP    ++   +   +  ++ +  
Subjt:  TVRVTNVSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYSLPAVPASAPLPVSSPSAENAGSGT

Query:  AGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAA-------VNNAGT
          S   KAEDVVS M++KGF LGKDA+ +AKS D+KHQLTSTAS++V S D++IG +EKI+ GTTVV+EKVKE+D+KFQV+EKTK+A       V+NAG+
Subjt:  AGSAMNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAA-------VNNAGT

Query:  ALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKV-LAEDQAKQE
        A+M NRYV TGA+WVT  F RV+KAA EV  K KEKV LAE++ +++
Subjt:  ALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKV-LAEDQAKQE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCGCAGGTGAGAACGGTGAGAGTTACCAATGTCTCGTTGAGCGCGTCGGAGAAAGATTTGAGAGACTTTTTTTCTTTTTCCGGTGAAATTGAAATTGTCGAAAT
GCGAAAGGACAATGAACGATCTCAAATTGCATTTGTTACCTTCAAGGATCCGAAAGGAGCCGAGACATCGATTCTACTCTCGGGAGCTACAATTGTTGATCAGCCTGTTA
GCATTGCTTCTGCTCCAGATTACAGTCTTCCTGCTGTACCTGCCAGTGCCCCTCTACCAGTGTCTTCTCCATCTGCAGAGAATGCAGGCTCTGGTACTGCTGGATCTGCA
ATGAATAAGGCCGAGGATGTTGTGAGCAGCATGCTGGCCAAAGGCTTCACTTTGGGCAAAGATGCCCTCAATAGGGCAAAGTCTTTCGACCAGAAGCACCAATTGACATC
AACAGCCTCATCAAAAGTCCTTTCTCTGGACCAAAAGATTGGCCTTAGCGAGAAGATTAGCGTTGGCACGACGGTGGTGAATGAGAAAGTGAAAGAAATGGATGAGAAGT
TTCAAGTGTCTGAGAAAACCAAGGCAGCAGTGAACAATGCAGGAACAGCCTTAATGGCTAACCGGTACGTCTCAACCGGGGCTTCCTGGGTTACCCAGACGTTTCAAAGA
GTCGCAAAAGCAGCCGTAGAAGTCAGTCACAAAACAAAGGAGAAGGTTTTAGCTGAGGATCAAGCGAAACAAGAGGGAAGATCTTAA
mRNA sequenceShow/hide mRNA sequence
TTTTGCCATCTGTATTATTTGCGAACCTAAACAACCGCCAAGCCACAACGCACCTCTCAAGGTCATTCTTCCTCTCTCTCTCTCTCTCTCTAAGAACTTGGATTTGGAAC
TTCTCCGGTGGATCAGACGGAGCAGCATGGCGTCGCAGGTGAGAACGGTGAGAGTTACCAATGTCTCGTTGAGCGCGTCGGAGAAAGATTTGAGAGACTTTTTTTCTTTT
TCCGGTGAAATTGAAATTGTCGAAATGCGAAAGGACAATGAACGATCTCAAATTGCATTTGTTACCTTCAAGGATCCGAAAGGAGCCGAGACATCGATTCTACTCTCGGG
AGCTACAATTGTTGATCAGCCTGTTAGCATTGCTTCTGCTCCAGATTACAGTCTTCCTGCTGTACCTGCCAGTGCCCCTCTACCAGTGTCTTCTCCATCTGCAGAGAATG
CAGGCTCTGGTACTGCTGGATCTGCAATGAATAAGGCCGAGGATGTTGTGAGCAGCATGCTGGCCAAAGGCTTCACTTTGGGCAAAGATGCCCTCAATAGGGCAAAGTCT
TTCGACCAGAAGCACCAATTGACATCAACAGCCTCATCAAAAGTCCTTTCTCTGGACCAAAAGATTGGCCTTAGCGAGAAGATTAGCGTTGGCACGACGGTGGTGAATGA
GAAAGTGAAAGAAATGGATGAGAAGTTTCAAGTGTCTGAGAAAACCAAGGCAGCAGTGAACAATGCAGGAACAGCCTTAATGGCTAACCGGTACGTCTCAACCGGGGCTT
CCTGGGTTACCCAGACGTTTCAAAGAGTCGCAAAAGCAGCCGTAGAAGTCAGTCACAAAACAAAGGAGAAGGTTTTAGCTGAGGATCAAGCGAAACAAGAGGGAAGATCT
TAA
Protein sequenceShow/hide protein sequence
MASQVRTVRVTNVSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLSGATIVDQPVSIASAPDYSLPAVPASAPLPVSSPSAENAGSGTAGSA
MNKAEDVVSSMLAKGFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAAVNNAGTALMANRYVSTGASWVTQTFQR
VAKAAVEVSHKTKEKVLAEDQAKQEGRS